RNA–Protein interactions for RNA: ENST00000474136.5

APP-215, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 1,309 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-215ENST00000474136 GJA9P57773 515 aa24.17■■□□□ 1.46
APP-215ENST00000474136 GNASQ5JWF2 1037 aa24.17■■□□□ 1.46
APP-215ENST00000474136 PSRC1Q6PGN9 363 aaPredicted RBP24.17■■□□□ 1.46
APP-215ENST00000474136 STK11IPQ8N1F8 1099 aa24.17■■□□□ 1.46
APP-215ENST00000474136 KIF1BPQ96EK5 621 aa24.17■■□□□ 1.46
APP-215ENST00000474136 CTAGE5O15320 804 aa24.16■■□□□ 1.46
APP-215ENST00000474136 NDUFB10O96000 172 aa24.16■■□□□ 1.46
APP-215ENST00000474136 MRPS5P82675 430 aaKnown RBP24.16■■□□□ 1.46
APP-215ENST00000474136 ZNF467Q7Z7K2 595 aaPredicted RBP24.16■■□□□ 1.46
APP-215ENST00000474136 UHRF1Q96T88 793 aaPredicted RBP24.16■■□□□ 1.46
APP-215ENST00000474136 SPC25Q9HBM1 224 aa24.16■■□□□ 1.46
APP-215ENST00000474136 RAVER2Q9HCJ3 691 aaKnown RBP24.16■■□□□ 1.46
APP-215ENST00000474136 MSRAQ9UJ68 235 aa24.16■■□□□ 1.46
APP-215ENST00000474136 F5H6K3 240 aa24.15■■□□□ 1.46
APP-215ENST00000474136 BEX3Q00994 111 aa24.15■■□□□ 1.46
APP-215ENST00000474136 KLRC3Q07444 240 aa24.15■■□□□ 1.46
APP-215ENST00000474136 ARMCX2Q7L311 632 aa24.15■■□□□ 1.46
APP-215ENST00000474136 HERVK_113Q902F9 699 aa24.15■■□□□ 1.46
APP-215ENST00000474136 DDRGK1Q96HY6 314 aa24.15■■□□□ 1.46
APP-215ENST00000474136 ABHD16BQ9H3Z7 469 aa24.15■■□□□ 1.46
APP-215ENST00000474136 IL23AQ9NPF7 189 aa24.15■■□□□ 1.46
APP-215ENST00000474136 YBX2Q9Y2T7 364 aaKnown RBP24.15■■□□□ 1.46
APP-215ENST00000474136 TLR3O15455 904 aaKnown RBP24.14■■□□□ 1.46
APP-215ENST00000474136 CD4P01730 458 aa24.14■■□□□ 1.46
APP-215ENST00000474136 RAB30Q15771 203 aa24.14■■□□□ 1.46
APP-215ENST00000474136 PRPF38AQ8NAV1 312 aaKnown RBP24.14■■□□□ 1.46
APP-215ENST00000474136 KIFC2Q96AC6 838 aa24.14■■□□□ 1.46
APP-215ENST00000474136 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.14■■□□□ 1.46
APP-215ENST00000474136 PUS7LQ9H0K6 701 aaKnown RBP24.14■■□□□ 1.46
APP-215ENST00000474136 UMODL1Q5DID0 1318 aa24.14■■□□□ 1.45
APP-215ENST00000474136 CHD7Q9P2D1 2997 aa24.14■■□□□ 1.45
APP-215ENST00000474136 ATP2A1O14983 1001 aa24.13■■□□□ 1.45
APP-215ENST00000474136 RASA1P20936 1047 aa24.13■■□□□ 1.45
APP-215ENST00000474136 UBE3CQ15386 1083 aa24.13■■□□□ 1.45
APP-215ENST00000474136 ANKRD35Q8N283 1001 aa24.13■■□□□ 1.45
APP-215ENST00000474136 KATNBL1Q9H079 304 aa24.13■■□□□ 1.45
APP-215ENST00000474136 NYAP2Q9P242 653 aa24.13■■□□□ 1.45
APP-215ENST00000474136 C11orf97A0A1B0GVM6 126 aaPredicted RBP24.12■■□□□ 1.45
APP-215ENST00000474136 ZBED4O75132 1171 aa24.12■■□□□ 1.45
APP-215ENST00000474136 ATP5JP18859 108 aa24.12■■□□□ 1.45
APP-215ENST00000474136 RPAP2Q8IXW5 612 aaPredicted RBP24.12■■□□□ 1.45
APP-215ENST00000474136 CCDC144CPQ8IYA2 1237 aa24.12■■□□□ 1.45
APP-215ENST00000474136 CCDC136Q96JN2 1154 aa24.12■■□□□ 1.45
APP-215ENST00000474136 NECAB3Q96P71 396 aaPredicted RBP24.12■■□□□ 1.45
APP-215ENST00000474136 HAUS7Q99871 368 aa24.12■■□□□ 1.45
APP-215ENST00000474136 CTDP1Q9Y5B0 961 aaPredicted RBP24.12■■□□□ 1.45
APP-215ENST00000474136 NCOR1O75376 2440 aa24.12■■□□□ 1.45
APP-215ENST00000474136 FGBP02675 491 aa24.11■■□□□ 1.45
APP-215ENST00000474136 PTGS1P23219 599 aa24.11■■□□□ 1.45
APP-215ENST00000474136 CNTN2Q02246 1040 aa24.11■■□□□ 1.45
APP-215ENST00000474136 CXCL17Q6UXB2 119 aa24.11■■□□□ 1.45
APP-215ENST00000474136 DHX30Q7L2E3 1194 aaKnown RBP eCLIP24.11■■□□□ 1.45
APP-215ENST00000474136 OTOP2Q7RTS6 562 aa24.11■■□□□ 1.45
APP-215ENST00000474136 SIRT2Q8IXJ6 389 aa24.11■■□□□ 1.45
APP-215ENST00000474136 SLC28A3Q9HAS3 691 aa24.11■■□□□ 1.45
APP-215ENST00000474136 SLC38A10Q9HBR0 1119 aa24.11■■□□□ 1.45
APP-215ENST00000474136 CLIP2Q9UDT6 1046 aa24.11■■□□□ 1.45
APP-215ENST00000474136 ASTN1O14525 1302 aa24.11■■□□□ 1.45
APP-215ENST00000474136 RABGGTBP53611 331 aa24.1■■□□□ 1.45
APP-215ENST00000474136 CCL23P55773 120 aa24.1■■□□□ 1.45
APP-215ENST00000474136 HIPK3Q9H422 1215 aa24.1■■□□□ 1.45
APP-215ENST00000474136 ARPP21Q9UBL0 812 aaPredicted RBP24.1■■□□□ 1.45
APP-215ENST00000474136 MCM3APO60318 1980 aa24.1■■□□□ 1.45
APP-215ENST00000474136 NKX3-2P78367 333 aa24.1■■□□□ 1.45
APP-215ENST00000474136 SLC43A3Q8NBI5 491 aa24.1■■□□□ 1.45
APP-215ENST00000474136 IL27Q8NEV9 243 aa24.1■■□□□ 1.45
APP-215ENST00000474136 RWDD1Q9H446 243 aaPredicted RBP24.1■■□□□ 1.45
APP-215ENST00000474136 MKNK2Q9HBH9 465 aa24.1■■□□□ 1.45
APP-215ENST00000474136 HOMER2Q9NSB8 354 aa24.1■■□□□ 1.45
APP-215ENST00000474136 GREB1LQ9C091 1923 aaPredicted RBP24.09■■□□□ 1.45
APP-215ENST00000474136 MYOGP15173 224 aa24.09■■□□□ 1.45
APP-215ENST00000474136 NOL8Q76FK4 1167 aaKnown RBP24.09■■□□□ 1.45
APP-215ENST00000474136 MICALL1Q8N3F8 863 aa24.09■■□□□ 1.45
APP-215ENST00000474136 CHST13Q8NET6 341 aa24.09■■□□□ 1.45
APP-215ENST00000474136 MTIF3Q9H2K0 278 aaKnown RBP24.09■■□□□ 1.45
APP-215ENST00000474136 FBXO40Q9UH90 709 aa24.09■■□□□ 1.45
APP-215ENST00000474136 DDX49Q9Y6V7 483 aaKnown RBP24.09■■□□□ 1.45
APP-215ENST00000474136 GRIN2DO15399 1336 aa24.08■■□□□ 1.45
APP-215ENST00000474136 IGKV6D-41A0A0C4DH26 115 aa24.08■■□□□ 1.44
APP-215ENST00000474136 MINDY4BA8MYZ0 360 aa24.08■■□□□ 1.44
APP-215ENST00000474136 PLA2G5P39877 138 aa24.08■■□□□ 1.44
APP-215ENST00000474136 TNFAIP2Q03169 654 aa24.08■■□□□ 1.44
APP-215ENST00000474136 SBK1Q52WX2 424 aa24.08■■□□□ 1.44
APP-215ENST00000474136 STRBPQ96SI9 672 aaKnown RBP24.08■■□□□ 1.44
APP-215ENST00000474136 TRPV6Q9H1D0 765 aa24.08■■□□□ 1.44
APP-215ENST00000474136 GSG1L2A8MUP6 293 aa24.07■■□□□ 1.44
APP-215ENST00000474136 RAB11FIP3O75154 756 aa24.07■■□□□ 1.44
APP-215ENST00000474136 HMMRO75330 724 aa24.07■■□□□ 1.44
APP-215ENST00000474136 TFF2Q03403 129 aa24.07■■□□□ 1.44
APP-215ENST00000474136 ITGA7Q13683 1181 aa24.07■■□□□ 1.44
APP-215ENST00000474136 LRRC47Q8N1G4 583 aaKnown RBP24.07■■□□□ 1.44
APP-215ENST00000474136 NOC4LQ9BVI4 516 aaKnown RBP24.07■■□□□ 1.44
APP-215ENST00000474136 WNT8AQ9H1J5 351 aa24.07■■□□□ 1.44
APP-215ENST00000474136 FEM1BQ9UK73 627 aa24.07■■□□□ 1.44
APP-215ENST00000474136 GNEQ9Y223 722 aaKnown RBP24.07■■□□□ 1.44
APP-215ENST00000474136 BDP1A6H8Y1 2624 aa24.06■■□□□ 1.44
APP-215ENST00000474136 PPP2R2DQ66LE6 453 aa24.06■■□□□ 1.44
APP-215ENST00000474136 TLK2Q86UE8 772 aa24.06■■□□□ 1.44
APP-215ENST00000474136 FAM133AQ8N9E0 248 aa24.06■■□□□ 1.44
APP-215ENST00000474136 VWCEQ96DN2 955 aa24.06■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms