RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 NEXMIFQ5QGS0 1516 aa5.84□□□□□ -1.47
TMEM39A-206ENST00000473684 ST20-MTHFSA0A0A6YYL1 179 aa5.84□□□□□ -1.47
TMEM39A-206ENST00000473684 CLNS1AP54105 237 aaKnown RBP5.84□□□□□ -1.47
TMEM39A-206ENST00000473684 BRD3Q15059 726 aa5.84□□□□□ -1.47
TMEM39A-206ENST00000473684 HHATQ5VTY9 493 aa5.84□□□□□ -1.47
TMEM39A-206ENST00000473684 ISM2Q6H9L7 571 aa5.84□□□□□ -1.47
TMEM39A-206ENST00000473684 GTPBP3Q969Y2 492 aaKnown RBP5.84□□□□□ -1.47
TMEM39A-206ENST00000473684 SAAL1Q96ER3 474 aa5.84□□□□□ -1.47
TMEM39A-206ENST00000473684 TRIM47Q96LD4 638 aa5.84□□□□□ -1.47
TMEM39A-206ENST00000473684 RSRP1Q9BUV0 290 aa5.84□□□□□ -1.47
TMEM39A-206ENST00000473684 DZANK1Q9NVP4 752 aa5.84□□□□□ -1.47
TMEM39A-206ENST00000473684 TTC41PQ6P2S7 1318 aa5.84□□□□□ -1.47
TMEM39A-206ENST00000473684 PHLPP2Q6ZVD8 1323 aa5.84□□□□□ -1.47
TMEM39A-206ENST00000473684 CCDC151A5D8V7 595 aa5.84□□□□□ -1.47
TMEM39A-206ENST00000473684 H3BQF6 201 aa5.84□□□□□ -1.47
TMEM39A-206ENST00000473684 SEC31AO94979 1220 aaKnown RBP5.84□□□□□ -1.47
TMEM39A-206ENST00000473684 CAVIN2O95810 425 aa5.84□□□□□ -1.47
TMEM39A-206ENST00000473684 FGFR3P22607 806 aa5.84□□□□□ -1.47
TMEM39A-206ENST00000473684 GJA8P48165 433 aa5.84□□□□□ -1.47
TMEM39A-206ENST00000473684 LIG3P49916 1009 aa5.84□□□□□ -1.47
TMEM39A-206ENST00000473684 NRLP54845 237 aa5.84□□□□□ -1.47
TMEM39A-206ENST00000473684 APOBRQ0VD83 1088 aa5.84□□□□□ -1.47
TMEM39A-206ENST00000473684 CHD1LQ86WJ1 897 aa5.84□□□□□ -1.47
TMEM39A-206ENST00000473684 CEP112Q8N8E3 955 aa5.84□□□□□ -1.47
TMEM39A-206ENST00000473684 MAB21L3Q8N8X9 362 aa5.84□□□□□ -1.47
TMEM39A-206ENST00000473684 CCDC34Q96HJ3 373 aa5.84□□□□□ -1.47
TMEM39A-206ENST00000473684 PLEKHG4BQ96PX9 1271 aa5.84□□□□□ -1.47
TMEM39A-206ENST00000473684 LZTS2Q9BRK4 669 aa5.84□□□□□ -1.47
TMEM39A-206ENST00000473684 STK31Q9BXU1 1019 aa5.84□□□□□ -1.47
TMEM39A-206ENST00000473684 TRIM5Q9C035 493 aa5.84□□□□□ -1.47
TMEM39A-206ENST00000473684 IQCGQ9H095 443 aaKnown RBP5.84□□□□□ -1.47
TMEM39A-206ENST00000473684 KBTBD4Q9NVX7 518 aa5.84□□□□□ -1.47
TMEM39A-206ENST00000473684 DDX19BQ9UMR2 479 aa5.84□□□□□ -1.47
TMEM39A-206ENST00000473684 CRYBG1Q9Y4K1 1723 aa5.84□□□□□ -1.48
TMEM39A-206ENST00000473684 CLTCL1P53675 1640 aa5.83□□□□□ -1.48
TMEM39A-206ENST00000473684 NFKBIEO00221 500 aa5.83□□□□□ -1.48
TMEM39A-206ENST00000473684 EXOC5O00471 708 aa5.83□□□□□ -1.48
TMEM39A-206ENST00000473684 RTN3O95197 1032 aaPredicted RBP5.83□□□□□ -1.48
TMEM39A-206ENST00000473684 CUL4AQ13619 759 aa5.83□□□□□ -1.48
TMEM39A-206ENST00000473684 LRRFIP1Q32MZ4 808 aaKnown RBP5.83□□□□□ -1.48
TMEM39A-206ENST00000473684 FBXW10Q5XX13 1052 aa5.83□□□□□ -1.48
TMEM39A-206ENST00000473684 CDCA2Q69YH5 1023 aaPredicted RBP5.83□□□□□ -1.48
TMEM39A-206ENST00000473684 DTHD1Q6ZMT9 781 aa5.83□□□□□ -1.48
TMEM39A-206ENST00000473684 EXOC8Q8IYI6 725 aa5.83□□□□□ -1.48
TMEM39A-206ENST00000473684 ACRBPQ8NEB7 543 aa5.83□□□□□ -1.48
TMEM39A-206ENST00000473684 TDRD7Q8NHU6 1098 aaKnown RBP5.83□□□□□ -1.48
TMEM39A-206ENST00000473684 FAM71BQ8TC56 605 aa5.83□□□□□ -1.48
TMEM39A-206ENST00000473684 MAGEC3Q8TD91 643 aa5.83□□□□□ -1.48
TMEM39A-206ENST00000473684 HNRNPLLQ8WVV9 542 aaKnown RBP5.83□□□□□ -1.48
TMEM39A-206ENST00000473684 DNAI1Q9UI46 699 aa5.83□□□□□ -1.48
TMEM39A-206ENST00000473684 KIF1AQ12756 1690 aa5.83□□□□□ -1.48
TMEM39A-206ENST00000473684 EME2A4GXA9 379 aaPredicted RBP5.83□□□□□ -1.48
TMEM39A-206ENST00000473684 GOLGA6CA6NDK9 693 aa5.83□□□□□ -1.48
TMEM39A-206ENST00000473684 GOLGA6BA6NDN3 693 aa5.83□□□□□ -1.48
TMEM39A-206ENST00000473684 USP27XA6NNY8 438 aa5.83□□□□□ -1.48
TMEM39A-206ENST00000473684 ZBTB42B2RXF5 422 aa5.83□□□□□ -1.48
TMEM39A-206ENST00000473684 EBAG9O00559 213 aa5.83□□□□□ -1.48
TMEM39A-206ENST00000473684 TRPA1O75762 1119 aa5.83□□□□□ -1.48
TMEM39A-206ENST00000473684 ECEL1O95672 775 aa5.83□□□□□ -1.48
TMEM39A-206ENST00000473684 GOLGA6DP0CG33 693 aa5.83□□□□□ -1.48
TMEM39A-206ENST00000473684 GRIA4P48058 902 aa5.83□□□□□ -1.48
TMEM39A-206ENST00000473684 CCDC85BQ15834 202 aaPredicted RBP5.83□□□□□ -1.48
TMEM39A-206ENST00000473684 SDCCAG8Q86SQ7 713 aaPredicted RBP5.83□□□□□ -1.48
TMEM39A-206ENST00000473684 CCDC50Q8IVM0 306 aa5.83□□□□□ -1.48
TMEM39A-206ENST00000473684 TRPM4Q8TD43 1214 aa5.83□□□□□ -1.48
TMEM39A-206ENST00000473684 NSUN5Q96P11 429 aaKnown RBP5.83□□□□□ -1.48
TMEM39A-206ENST00000473684 TRIM56Q9BRZ2 755 aaKnown RBP5.83□□□□□ -1.48
TMEM39A-206ENST00000473684 BHLHE41Q9C0J9 482 aaPredicted RBP5.83□□□□□ -1.48
TMEM39A-206ENST00000473684 RMI1Q9H9A7 625 aa5.83□□□□□ -1.48
TMEM39A-206ENST00000473684 KIF9Q9HAQ2 790 aa5.83□□□□□ -1.48
TMEM39A-206ENST00000473684 RRP7BPQ9NSQ0 103 aa5.83□□□□□ -1.48
TMEM39A-206ENST00000473684 GOLGA6AQ9NYA3 693 aa5.83□□□□□ -1.48
TMEM39A-206ENST00000473684 AKAP2Q9Y2D5 859 aa5.83□□□□□ -1.48
TMEM39A-206ENST00000473684 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.83□□□□□ -1.48
TMEM39A-206ENST00000473684 ABCA3Q99758 1704 aa5.83□□□□□ -1.48
TMEM39A-206ENST00000473684 FSBPO95073 299 aa5.82□□□□□ -1.48
TMEM39A-206ENST00000473684 ITPKAP23677 461 aa5.82□□□□□ -1.48
TMEM39A-206ENST00000473684 DNAJA1P31689 397 aaKnown RBP5.82□□□□□ -1.48
TMEM39A-206ENST00000473684 GNAI1P63096 354 aa5.82□□□□□ -1.48
TMEM39A-206ENST00000473684 ARID5AQ03989 594 aa5.82□□□□□ -1.48
TMEM39A-206ENST00000473684 PAK2Q13177 524 aa5.82□□□□□ -1.48
TMEM39A-206ENST00000473684 RASA3Q14644 834 aa5.82□□□□□ -1.48
TMEM39A-206ENST00000473684 ZKSCAN2Q63HK3 967 aa5.82□□□□□ -1.48
TMEM39A-206ENST00000473684 SV2BQ7L1I2 683 aa5.82□□□□□ -1.48
TMEM39A-206ENST00000473684 HDXQ7Z353 690 aa5.82□□□□□ -1.48
TMEM39A-206ENST00000473684 SPATS2Q86XZ4 545 aaKnown RBP5.82□□□□□ -1.48
TMEM39A-206ENST00000473684 DZIP1LQ8IYY4 767 aaKnown RBP5.82□□□□□ -1.48
TMEM39A-206ENST00000473684 PARD3BQ8TEW8 1205 aa5.82□□□□□ -1.48
TMEM39A-206ENST00000473684 RABGGTAQ92696 567 aa5.82□□□□□ -1.48
TMEM39A-206ENST00000473684 ARMC5Q96C12 935 aa5.82□□□□□ -1.48
TMEM39A-206ENST00000473684 MRFAP1L1Q96HT8 127 aa5.82□□□□□ -1.48
TMEM39A-206ENST00000473684 SLX1AQ9BQ83 275 aa5.82□□□□□ -1.48
TMEM39A-206ENST00000473684 SUN2Q9UH99 717 aa5.82□□□□□ -1.48
TMEM39A-206ENST00000473684 NRBP1Q9UHY1 535 aa5.82□□□□□ -1.48
TMEM39A-206ENST00000473684 PHF24Q9UPV7 400 aa5.82□□□□□ -1.48
TMEM39A-206ENST00000473684 RPAP1Q9BWH6 1393 aaPredicted RBP5.82□□□□□ -1.48
TMEM39A-206ENST00000473684 MYO5BQ9ULV0 1848 aa5.82□□□□□ -1.48
TMEM39A-206ENST00000473684 ZSCAN9O15535 394 aaPredicted RBP5.82□□□□□ -1.48
TMEM39A-206ENST00000473684 EZRP15311 586 aaKnown RBP5.82□□□□□ -1.48
TMEM39A-206ENST00000473684 PPP2R1AP30153 589 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms