RNA–Protein interactions for RNA: ENST00000473417.5

SNX4-204, Transcript of sorting nexin 4, humanhuman

TSL 3

Gene SNX4, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-204ENST00000473417 SENP6Q9GZR1 1112 aaPredicted RBP21.25■□□□□ 0.99
SNX4-204ENST00000473417 LSG1Q9H089 658 aaKnown RBP21.25■□□□□ 0.99
SNX4-204ENST00000473417 RAVER2Q9HCJ3 691 aaKnown RBP21.25■□□□□ 0.99
SNX4-204ENST00000473417 STX8Q9UNK0 236 aa21.25■□□□□ 0.99
SNX4-204ENST00000473417 TMEM232C9JQI7 657 aa21.24■□□□□ 0.99
SNX4-204ENST00000473417 FDX1P10109 184 aa21.24■□□□□ 0.99
SNX4-204ENST00000473417 GJC2Q5T442 439 aaPredicted RBP21.24■□□□□ 0.99
SNX4-204ENST00000473417 CTDP1Q9Y5B0 961 aaPredicted RBP21.24■□□□□ 0.99
SNX4-204ENST00000473417 RBM8AQ9Y5S9 174 aaKnown RBP21.24■□□□□ 0.99
SNX4-204ENST00000473417 CYP21A2P08686 494 aa21.23■□□□□ 0.99
SNX4-204ENST00000473417 SLC1A4P43007 532 aa21.23■□□□□ 0.99
SNX4-204ENST00000473417 FAM160B2Q86V87 743 aa21.23■□□□□ 0.99
SNX4-204ENST00000473417 MSL3Q8N5Y2 521 aaKnown RBP21.23■□□□□ 0.99
SNX4-204ENST00000473417 ESR2Q92731 530 aa21.23■□□□□ 0.99
SNX4-204ENST00000473417 B4E1Z4 1266 aa21.22■□□□□ 0.99
SNX4-204ENST00000473417 KBTBD13C9JR72 458 aa21.22■□□□□ 0.99
SNX4-204ENST00000473417 PLA2G6O60733 806 aa21.22■□□□□ 0.99
SNX4-204ENST00000473417 KDM4AO75164 1064 aa21.22■□□□□ 0.99
SNX4-204ENST00000473417 MAGEA10P43363 369 aaPredicted RBP21.22■□□□□ 0.99
SNX4-204ENST00000473417 RASGRP2Q7LDG7 609 aa21.22■□□□□ 0.99
SNX4-204ENST00000473417 CHST13Q8NET6 341 aa21.22■□□□□ 0.99
SNX4-204ENST00000473417 CHURC1Q8WUH1 139 aa21.22■□□□□ 0.99
SNX4-204ENST00000473417 DDX11Q96FC9 970 aa21.22■□□□□ 0.99
SNX4-204ENST00000473417 FBXO40Q9UH90 709 aa21.22■□□□□ 0.99
SNX4-204ENST00000473417 SYNGAP1Q96PV0 1343 aa21.22■□□□□ 0.99
SNX4-204ENST00000473417 ZNF865P0CJ78 1059 aaPredicted RBP21.21■□□□□ 0.99
SNX4-204ENST00000473417 TAL1P17542 331 aaPredicted RBP21.21■□□□□ 0.99
SNX4-204ENST00000473417 MCCP23508 829 aa21.21■□□□□ 0.99
SNX4-204ENST00000473417 SLC4A3P48751 1232 aa21.21■□□□□ 0.99
SNX4-204ENST00000473417 ATN1P54259 1190 aaPredicted RBP21.21■□□□□ 0.99
SNX4-204ENST00000473417 LRRC41Q15345 812 aa21.21■□□□□ 0.99
SNX4-204ENST00000473417 MAMDC4Q6UXC1 1216 aa21.21■□□□□ 0.99
SNX4-204ENST00000473417 ZNF467Q7Z7K2 595 aaPredicted RBP21.21■□□□□ 0.99
SNX4-204ENST00000473417 ZKSCAN3Q9BRR0 538 aa21.21■□□□□ 0.99
SNX4-204ENST00000473417 ISY1Q9ULR0 285 aaKnown RBP21.21■□□□□ 0.99
SNX4-204ENST00000473417 TAF6LQ9Y6J9 622 aa21.21■□□□□ 0.99
SNX4-204ENST00000473417 ZNF536O15090 1300 aa21.21■□□□□ 0.99
SNX4-204ENST00000473417 RARBP10826 455 aa21.2■□□□□ 0.98
SNX4-204ENST00000473417 AKR1A1P14550 325 aa21.2■□□□□ 0.98
SNX4-204ENST00000473417 RCSD1Q6JBY9 416 aa21.2■□□□□ 0.98
SNX4-204ENST00000473417 KCTD1Q719H9 257 aa21.2■□□□□ 0.98
SNX4-204ENST00000473417 CHMP4CQ96CF2 233 aa21.2■□□□□ 0.98
SNX4-204ENST00000473417 FGD4Q96M96 766 aa21.2■□□□□ 0.98
SNX4-204ENST00000473417 KRT23Q9C075 422 aa21.2■□□□□ 0.98
SNX4-204ENST00000473417 XPNPEP3Q9NQH7 507 aa21.2■□□□□ 0.98
SNX4-204ENST00000473417 TCP11L1Q9NUJ3 509 aa21.2■□□□□ 0.98
SNX4-204ENST00000473417 IKQ13123 557 aaPredicted RBP21.19■□□□□ 0.98
SNX4-204ENST00000473417 SNX17Q15036 470 aa21.19■□□□□ 0.98
SNX4-204ENST00000473417 ANKRD35Q8N283 1001 aa21.19■□□□□ 0.98
SNX4-204ENST00000473417 CNNM2Q9H8M5 875 aa21.19■□□□□ 0.98
SNX4-204ENST00000473417 ZSWIM5Q9P217 1185 aa21.19■□□□□ 0.98
SNX4-204ENST00000473417 CNPY2Q9Y2B0 182 aa21.19■□□□□ 0.98
SNX4-204ENST00000473417 MYH6P13533 1939 aa21.19■□□□□ 0.98
SNX4-204ENST00000473417 SNAI1O95863 264 aaPredicted RBP21.18■□□□□ 0.98
SNX4-204ENST00000473417 RTP1P59025 263 aa21.18■□□□□ 0.98
SNX4-204ENST00000473417 TRDNQ13061 729 aa21.18■□□□□ 0.98
SNX4-204ENST00000473417 SLC39A5Q6ZMH5 540 aa21.18■□□□□ 0.98
SNX4-204ENST00000473417 DCAF4Q8WV16 495 aa21.18■□□□□ 0.98
SNX4-204ENST00000473417 ACAD9Q9H845 621 aa21.18■□□□□ 0.98
SNX4-204ENST00000473417 HOMER2Q9NSB8 354 aa21.18■□□□□ 0.98
SNX4-204ENST00000473417 PRR12Q9ULL5 1215 aa21.18■□□□□ 0.98
SNX4-204ENST00000473417 MTMR7Q9Y216 660 aa21.18■□□□□ 0.98
SNX4-204ENST00000473417 LAMA2P24043 3122 aaKnown RBP21.18■□□□□ 0.98
SNX4-204ENST00000473417 E7EWF7 191 aa21.17■□□□□ 0.98
SNX4-204ENST00000473417 SOX1O00570 391 aaPredicted RBP21.17■□□□□ 0.98
SNX4-204ENST00000473417 SLC27A2O14975 620 aa21.17■□□□□ 0.98
SNX4-204ENST00000473417 MYCNP04198 464 aaPredicted RBP21.17■□□□□ 0.98
SNX4-204ENST00000473417 ADCYAP1R1P41586 468 aa21.17■□□□□ 0.98
SNX4-204ENST00000473417 NT5C2P49902 561 aa21.17■□□□□ 0.98
SNX4-204ENST00000473417 STOX1Q6ZVD7 989 aa21.17■□□□□ 0.98
SNX4-204ENST00000473417 IQCA1Q86XH1 822 aa21.17■□□□□ 0.98
SNX4-204ENST00000473417 AGBL1Q96MI9 1066 aa21.17■□□□□ 0.98
SNX4-204ENST00000473417 TMEM47Q9BQJ4 181 aa21.17■□□□□ 0.98
SNX4-204ENST00000473417 RNF146Q9NTX7 359 aa21.17■□□□□ 0.98
SNX4-204ENST00000473417 PHF24Q9UPV7 400 aa21.17■□□□□ 0.98
SNX4-204ENST00000473417 ADAMTS4O75173 837 aa21.16■□□□□ 0.98
SNX4-204ENST00000473417 PGK1P00558 417 aa21.16■□□□□ 0.98
SNX4-204ENST00000473417 TOP1P11387 765 aaKnown RBP21.16■□□□□ 0.98
SNX4-204ENST00000473417 NECTIN1Q15223 517 aa21.16■□□□□ 0.98
SNX4-204ENST00000473417 TKFCQ3LXA3 575 aa21.16■□□□□ 0.98
SNX4-204ENST00000473417 CREB3L3Q68CJ9 461 aa21.16■□□□□ 0.98
SNX4-204ENST00000473417 RNF180Q86T96 592 aa21.16■□□□□ 0.98
SNX4-204ENST00000473417 TDHQ8IZJ6 230 aa21.16■□□□□ 0.98
SNX4-204ENST00000473417 LENG1Q96BZ8 264 aaPredicted RBP21.16■□□□□ 0.98
SNX4-204ENST00000473417 A1CFQ9NQ94 594 aaKnown RBP21.16■□□□□ 0.98
SNX4-204ENST00000473417 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.16■□□□□ 0.98
SNX4-204ENST00000473417 ATP11BQ9Y2G3 1177 aa21.16■□□□□ 0.98
SNX4-204ENST00000473417 SYNRGQ9UMZ2 1314 aa21.15■□□□□ 0.98
SNX4-204ENST00000473417 CCDC96Q2M329 555 aa21.15■□□□□ 0.98
SNX4-204ENST00000473417 C1orf53Q5VUE5 145 aa21.15■□□□□ 0.98
SNX4-204ENST00000473417 BTNL9Q6UXG8 535 aa21.15■□□□□ 0.98
SNX4-204ENST00000473417 CYB5R4Q7L1T6 521 aa21.15■□□□□ 0.98
SNX4-204ENST00000473417 RALYLQ86SE5 291 aaKnown RBP21.15■□□□□ 0.98
SNX4-204ENST00000473417 FAM133AQ8N9E0 248 aa21.15■□□□□ 0.98
SNX4-204ENST00000473417 NCOA7Q8NI08 942 aa21.15■□□□□ 0.98
SNX4-204ENST00000473417 TTC14Q96N46 770 aa21.15■□□□□ 0.98
SNX4-204ENST00000473417 ZSCAN10Q96SZ4 725 aaPredicted RBP21.15■□□□□ 0.98
SNX4-204ENST00000473417 UBE2OQ9C0C9 1292 aaKnown RBP21.15■□□□□ 0.98
SNX4-204ENST00000473417 ZHX1Q9UKY1 873 aaPredicted RBP21.15■□□□□ 0.98
SNX4-204ENST00000473417 FAM184BQ9ULE4 1060 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms