RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 TDHQ8IZJ6 230 aa18.1■□□□□ 0.49
VTI1A-203ENST00000472892 EXOC6Q8TAG9 804 aa18.1■□□□□ 0.49
VTI1A-203ENST00000472892 LRCH3Q96II8 777 aa18.1■□□□□ 0.49
VTI1A-203ENST00000472892 PHF24Q9UPV7 400 aa18.1■□□□□ 0.49
VTI1A-203ENST00000472892 ZNF536O15090 1300 aa18.09■□□□□ 0.49
VTI1A-203ENST00000472892 ZMYM6O95789 1325 aa18.09■□□□□ 0.49
VTI1A-203ENST00000472892 MDM2Q00987 491 aaPredicted RBP18.09■□□□□ 0.49
VTI1A-203ENST00000472892 RNF180Q86T96 592 aa18.09■□□□□ 0.49
VTI1A-203ENST00000472892 ANKRD35Q8N283 1001 aa18.09■□□□□ 0.49
VTI1A-203ENST00000472892 RILPL2Q969X0 211 aa18.09■□□□□ 0.49
VTI1A-203ENST00000472892 TCP11L1Q9NUJ3 509 aa18.09■□□□□ 0.49
VTI1A-203ENST00000472892 PLXNA1Q9UIW2 1896 aa18.08■□□□□ 0.49
VTI1A-203ENST00000472892 PGK1P00558 417 aa18.08■□□□□ 0.48
VTI1A-203ENST00000472892 SDSP20132 328 aa18.08■□□□□ 0.48
VTI1A-203ENST00000472892 GPR153Q6NV75 609 aa18.08■□□□□ 0.48
VTI1A-203ENST00000472892 KCTD1Q719H9 257 aa18.08■□□□□ 0.48
VTI1A-203ENST00000472892 FERMT2Q96AC1 680 aa18.08■□□□□ 0.48
VTI1A-203ENST00000472892 CHMP4CQ96CF2 233 aa18.08■□□□□ 0.48
VTI1A-203ENST00000472892 FGD4Q96M96 766 aa18.08■□□□□ 0.48
VTI1A-203ENST00000472892 AGBL1Q96MI9 1066 aa18.08■□□□□ 0.48
VTI1A-203ENST00000472892 FAM184BQ9ULE4 1060 aa18.08■□□□□ 0.48
VTI1A-203ENST00000472892 ISY1Q9ULR0 285 aaKnown RBP18.08■□□□□ 0.48
VTI1A-203ENST00000472892 ATP11BQ9Y2G3 1177 aa18.08■□□□□ 0.48
VTI1A-203ENST00000472892 SMCHD1A6NHR9 2005 aa18.08■□□□□ 0.48
VTI1A-203ENST00000472892 CCDC171Q6TFL3 1326 aa18.07■□□□□ 0.48
VTI1A-203ENST00000472892 ADAMTS4O75173 837 aa18.07■□□□□ 0.48
VTI1A-203ENST00000472892 IKQ13123 557 aaPredicted RBP18.07■□□□□ 0.48
VTI1A-203ENST00000472892 TKFCQ3LXA3 575 aa18.07■□□□□ 0.48
VTI1A-203ENST00000472892 LBHD1Q9BQE6 289 aaPredicted RBP18.07■□□□□ 0.48
VTI1A-203ENST00000472892 ACAD9Q9H845 621 aa18.07■□□□□ 0.48
VTI1A-203ENST00000472892 PRKAG2Q9UGJ0 569 aa18.07■□□□□ 0.48
VTI1A-203ENST00000472892 PRR12Q9ULL5 1215 aa18.07■□□□□ 0.48
VTI1A-203ENST00000472892 PCP11498 1178 aaKnown RBP18.06■□□□□ 0.48
VTI1A-203ENST00000472892 ACVR2BQ13705 512 aa18.06■□□□□ 0.48
VTI1A-203ENST00000472892 TRIM60Q495X7 471 aa18.06■□□□□ 0.48
VTI1A-203ENST00000472892 FAM133AQ8N9E0 248 aa18.06■□□□□ 0.48
VTI1A-203ENST00000472892 DCAF4Q8WV16 495 aa18.06■□□□□ 0.48
VTI1A-203ENST00000472892 LENG1Q96BZ8 264 aaPredicted RBP18.06■□□□□ 0.48
VTI1A-203ENST00000472892 TSEN34Q9BSV6 310 aaKnown RBP18.06■□□□□ 0.48
VTI1A-203ENST00000472892 ABHD16BQ9H3Z7 469 aa18.06■□□□□ 0.48
VTI1A-203ENST00000472892 TOMM22Q9NS69 142 aa18.06■□□□□ 0.48
VTI1A-203ENST00000472892 HOMER2Q9NSB8 354 aa18.06■□□□□ 0.48
VTI1A-203ENST00000472892 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.06■□□□□ 0.48
VTI1A-203ENST00000472892 DUSP11O75319 330 aaKnown RBP18.05■□□□□ 0.48
VTI1A-203ENST00000472892 TOP1P11387 765 aaKnown RBP18.05■□□□□ 0.48
VTI1A-203ENST00000472892 MFAP1P55081 439 aaKnown RBP18.05■□□□□ 0.48
VTI1A-203ENST00000472892 RRP12Q5JTH9 1297 aaKnown RBP18.05■□□□□ 0.48
VTI1A-203ENST00000472892 AKNAD1Q5T1N1 836 aa18.05■□□□□ 0.48
VTI1A-203ENST00000472892 CCSAPQ6IQ19 270 aaPredicted RBP18.05■□□□□ 0.48
VTI1A-203ENST00000472892 BTNL9Q6UXG8 535 aa18.05■□□□□ 0.48
VTI1A-203ENST00000472892 MFSD6Q6ZSS7 791 aa18.05■□□□□ 0.48
VTI1A-203ENST00000472892 RASGRP2Q7LDG7 609 aa18.05■□□□□ 0.48
VTI1A-203ENST00000472892 KLHDC9Q8NEP7 349 aa18.05■□□□□ 0.48
VTI1A-203ENST00000472892 TTC14Q96N46 770 aa18.05■□□□□ 0.48
VTI1A-203ENST00000472892 TRERF1Q96PN7 1200 aa18.05■□□□□ 0.48
VTI1A-203ENST00000472892 TMEM47Q9BQJ4 181 aa18.05■□□□□ 0.48
VTI1A-203ENST00000472892 A1CFQ9NQ94 594 aaKnown RBP18.05■□□□□ 0.48
VTI1A-203ENST00000472892 RNF146Q9NTX7 359 aa18.05■□□□□ 0.48
VTI1A-203ENST00000472892 ZHX1Q9UKY1 873 aaPredicted RBP18.05■□□□□ 0.48
VTI1A-203ENST00000472892 POTEB2H3BUK9 544 aa18.04■□□□□ 0.48
VTI1A-203ENST00000472892 SNAP25P60880 206 aa18.04■□□□□ 0.48
VTI1A-203ENST00000472892 HAND2P61296 217 aa18.04■□□□□ 0.48
VTI1A-203ENST00000472892 CNTN2Q02246 1040 aa18.04■□□□□ 0.48
VTI1A-203ENST00000472892 ARMCX2Q7L311 632 aa18.04■□□□□ 0.48
VTI1A-203ENST00000472892 CCDC144CPQ8IYA2 1237 aa18.04■□□□□ 0.48
VTI1A-203ENST00000472892 KATNBL1Q9H079 304 aa18.04■□□□□ 0.48
VTI1A-203ENST00000472892 SYNRGQ9UMZ2 1314 aa18.03■□□□□ 0.48
VTI1A-203ENST00000472892 A0A1W2PQ45 241 aaPredicted RBP18.03■□□□□ 0.48
VTI1A-203ENST00000472892 A0A1W2PQY0 241 aa18.03■□□□□ 0.48
VTI1A-203ENST00000472892 SOWAHBA6NEL2 793 aa18.03■□□□□ 0.48
VTI1A-203ENST00000472892 ALAS1P13196 640 aa18.03■□□□□ 0.48
VTI1A-203ENST00000472892 TLE2Q04725 743 aa18.03■□□□□ 0.48
VTI1A-203ENST00000472892 CCDC144BQ3MJ40 725 aa18.03■□□□□ 0.48
VTI1A-203ENST00000472892 TTBK2Q6IQ55 1244 aa18.03■□□□□ 0.48
VTI1A-203ENST00000472892 CCDC174Q6PII3 467 aa18.03■□□□□ 0.48
VTI1A-203ENST00000472892 TBC1D10CQ8IV04 446 aa18.03■□□□□ 0.48
VTI1A-203ENST00000472892 RNF41Q9H4P4 317 aaPredicted RBP18.03■□□□□ 0.48
VTI1A-203ENST00000472892 PDLIM7Q9NR12 457 aa18.03■□□□□ 0.48
VTI1A-203ENST00000472892 MTMR7Q9Y216 660 aa18.03■□□□□ 0.48
VTI1A-203ENST00000472892 TRIM43BA6NCK2 446 aa18.02■□□□□ 0.48
VTI1A-203ENST00000472892 MOXD2PA6NHM9 499 aa18.02■□□□□ 0.48
VTI1A-203ENST00000472892 ADCY6O43306 1168 aa18.02■□□□□ 0.48
VTI1A-203ENST00000472892 ICAM1P05362 532 aa18.02■□□□□ 0.48
VTI1A-203ENST00000472892 ACLYP53396 1101 aa18.02■□□□□ 0.48
VTI1A-203ENST00000472892 KCNA10Q16322 511 aa18.02■□□□□ 0.48
VTI1A-203ENST00000472892 CCDC96Q2M329 555 aa18.02■□□□□ 0.48
VTI1A-203ENST00000472892 MUM1L1Q5H9M0 696 aa18.02■□□□□ 0.48
VTI1A-203ENST00000472892 CWC27Q6UX04 472 aaKnown RBP18.02■□□□□ 0.48
VTI1A-203ENST00000472892 SH3RF1Q7Z6J0 888 aa18.02■□□□□ 0.48
VTI1A-203ENST00000472892 TRIM43Q96BQ3 446 aaPredicted RBP18.02■□□□□ 0.48
VTI1A-203ENST00000472892 RANBP17Q9H2T7 1088 aaKnown RBP18.02■□□□□ 0.48
VTI1A-203ENST00000472892 ASB14A6NK59 587 aa18.01■□□□□ 0.47
VTI1A-203ENST00000472892 HIP1O00291 1037 aa18.01■□□□□ 0.47
VTI1A-203ENST00000472892 ZNF213O14771 459 aa18.01■□□□□ 0.47
VTI1A-203ENST00000472892 CST5P28325 142 aaPredicted RBP18.01■□□□□ 0.47
VTI1A-203ENST00000472892 SLC16A2P36021 539 aa18.01■□□□□ 0.47
VTI1A-203ENST00000472892 GJA9P57773 515 aa18.01■□□□□ 0.47
VTI1A-203ENST00000472892 NUP133Q8WUM0 1156 aa18.01■□□□□ 0.47
VTI1A-203ENST00000472892 TOX2Q96NM4 488 aa18.01■□□□□ 0.47
VTI1A-203ENST00000472892 UPF3AQ9H1J1 476 aaKnown RBP18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms