RNA–Protein interactions for RNA: ENST00000472789.1

SMARCD3-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 2

Gene SMARCD3, Length 863 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-208ENST00000472789 PLEKHH3Q7Z736 793 aa12.27□□□□□ -0.45
SMARCD3-208ENST00000472789 ZNF654Q8IZM8 581 aa12.27□□□□□ -0.45
SMARCD3-208ENST00000472789 RAET1EQ8TD07 263 aa12.27□□□□□ -0.45
SMARCD3-208ENST00000472789 BRF1Q92994 677 aa12.27□□□□□ -0.45
SMARCD3-208ENST00000472789 ZNF274Q96GC6 653 aaPredicted RBP12.27□□□□□ -0.45
SMARCD3-208ENST00000472789 AGXT2Q9BYV1 514 aa12.27□□□□□ -0.45
SMARCD3-208ENST00000472789 CPVLQ9H3G5 476 aa12.27□□□□□ -0.45
SMARCD3-208ENST00000472789 VAT1LQ9HCJ6 419 aa12.27□□□□□ -0.45
SMARCD3-208ENST00000472789 SLC12A7Q9Y666 1083 aa12.27□□□□□ -0.45
SMARCD3-208ENST00000472789 KIAA0100Q14667 2235 aaKnown RBP12.27□□□□□ -0.45
SMARCD3-208ENST00000472789 CEP290O15078 2479 aa12.27□□□□□ -0.45
SMARCD3-208ENST00000472789 PLA2G6O60733 806 aa12.26□□□□□ -0.45
SMARCD3-208ENST00000472789 DDAH1O94760 285 aa12.26□□□□□ -0.45
SMARCD3-208ENST00000472789 CD2BP2O95400 341 aaKnown RBP12.26□□□□□ -0.45
SMARCD3-208ENST00000472789 GNRH1P01148 92 aa12.26□□□□□ -0.45
SMARCD3-208ENST00000472789 SNHG28P0DPA3 235 aa12.26□□□□□ -0.45
SMARCD3-208ENST00000472789 FDX1P10109 184 aa12.26□□□□□ -0.45
SMARCD3-208ENST00000472789 ERCC3P19447 782 aa12.26□□□□□ -0.45
SMARCD3-208ENST00000472789 RXRAP19793 462 aa12.26□□□□□ -0.45
SMARCD3-208ENST00000472789 PRKCZQ05513 592 aa12.26□□□□□ -0.45
SMARCD3-208ENST00000472789 GRM4Q14833 912 aa12.26□□□□□ -0.45
SMARCD3-208ENST00000472789 PPP2R5BQ15173 497 aa12.26□□□□□ -0.45
SMARCD3-208ENST00000472789 NOL8Q76FK4 1167 aaKnown RBP12.26□□□□□ -0.45
SMARCD3-208ENST00000472789 GPR142Q7Z601 462 aa12.26□□□□□ -0.45
SMARCD3-208ENST00000472789 CCDC144CPQ8IYA2 1237 aa12.26□□□□□ -0.45
SMARCD3-208ENST00000472789 CTCFLQ8NI51 663 aaPredicted RBP12.26□□□□□ -0.45
SMARCD3-208ENST00000472789 TEX13BQ9BXU2 312 aa12.26□□□□□ -0.45
SMARCD3-208ENST00000472789 SLKQ9H2G2 1235 aaPredicted RBP12.26□□□□□ -0.45
SMARCD3-208ENST00000472789 SLC38A10Q9HBR0 1119 aa12.26□□□□□ -0.45
SMARCD3-208ENST00000472789 HOMER2Q9NSB8 354 aa12.26□□□□□ -0.45
SMARCD3-208ENST00000472789 SRRDQ9UH36 339 aa12.26□□□□□ -0.45
SMARCD3-208ENST00000472789 ADAMTS5Q9UNA0 930 aa12.26□□□□□ -0.45
SMARCD3-208ENST00000472789 ZSWIM8A7E2V4 1837 aa12.25□□□□□ -0.45
SMARCD3-208ENST00000472789 KLRF2D3W0D1 207 aa12.25□□□□□ -0.45
SMARCD3-208ENST00000472789 SLC25A27O95847 323 aa12.25□□□□□ -0.45
SMARCD3-208ENST00000472789 KIF5BP33176 963 aa12.25□□□□□ -0.45
SMARCD3-208ENST00000472789 EVCP57679 992 aa12.25□□□□□ -0.45
SMARCD3-208ENST00000472789 CUL4AQ13619 759 aa12.25□□□□□ -0.45
SMARCD3-208ENST00000472789 TOB2Q14106 344 aaPredicted RBP12.25□□□□□ -0.45
SMARCD3-208ENST00000472789 CPLX2Q6PUV4 134 aaKnown RBP12.25□□□□□ -0.45
SMARCD3-208ENST00000472789 BTNL9Q6UXG8 535 aa12.25□□□□□ -0.45
SMARCD3-208ENST00000472789 MICU3Q86XE3 530 aa12.25□□□□□ -0.45
SMARCD3-208ENST00000472789 RIOX2Q8IUF8 465 aa12.25□□□□□ -0.45
SMARCD3-208ENST00000472789 STAG2Q8N3U4 1231 aa12.25□□□□□ -0.45
SMARCD3-208ENST00000472789 SHCBP1Q8NEM2 672 aa12.25□□□□□ -0.45
SMARCD3-208ENST00000472789 REPS2Q8NFH8 660 aa12.25□□□□□ -0.45
SMARCD3-208ENST00000472789 MROH8Q9H579 483 aa12.25□□□□□ -0.45
SMARCD3-208ENST00000472789 BIN2Q9UBW5 565 aaPredicted RBP12.25□□□□□ -0.45
SMARCD3-208ENST00000472789 ZNF214Q9UL59 606 aaPredicted RBP12.25□□□□□ -0.45
SMARCD3-208ENST00000472789 CCPG1Q9ULG6 757 aa12.25□□□□□ -0.45
SMARCD3-208ENST00000472789 GABRQQ9UN88 632 aa12.25□□□□□ -0.45
SMARCD3-208ENST00000472789 PTPN22Q9Y2R2 807 aa12.25□□□□□ -0.45
SMARCD3-208ENST00000472789 KIF3AQ9Y496 699 aa12.25□□□□□ -0.45
SMARCD3-208ENST00000472789 PTCH2Q9Y6C5 1203 aa12.25□□□□□ -0.45
SMARCD3-208ENST00000472789 RLFQ13129 1914 aa12.25□□□□□ -0.45
SMARCD3-208ENST00000472789 KLF18A0A0U1RQI7 1052 aa12.24□□□□□ -0.45
SMARCD3-208ENST00000472789 CCDC196A0A1B0GTZ2 297 aa12.24□□□□□ -0.45
SMARCD3-208ENST00000472789 POTEFA5A3E0 1075 aa12.24□□□□□ -0.45
SMARCD3-208ENST00000472789 CALM1P0DP23 149 aa12.24□□□□□ -0.45
SMARCD3-208ENST00000472789 CALM2P0DP24 149 aa12.24□□□□□ -0.45
SMARCD3-208ENST00000472789 CALM3P0DP25 149 aa12.24□□□□□ -0.45
SMARCD3-208ENST00000472789 ALAS1P13196 640 aa12.24□□□□□ -0.45
SMARCD3-208ENST00000472789 CYP2B6P20813 491 aa12.24□□□□□ -0.45
SMARCD3-208ENST00000472789 COPB2P35606 906 aa12.24□□□□□ -0.45
SMARCD3-208ENST00000472789 FLT3LGP49771 235 aa12.24□□□□□ -0.45
SMARCD3-208ENST00000472789 RCAN1P53805 252 aa12.24□□□□□ -0.45
SMARCD3-208ENST00000472789 PRMT2P55345 433 aa12.24□□□□□ -0.45
SMARCD3-208ENST00000472789 APOBRQ0VD83 1088 aa12.24□□□□□ -0.45
SMARCD3-208ENST00000472789 TROAPQ12815 778 aa12.24□□□□□ -0.45
SMARCD3-208ENST00000472789 HABP4Q5JVS0 413 aaKnown RBP12.24□□□□□ -0.45
SMARCD3-208ENST00000472789 SGMS1Q86VZ5 419 aa12.24□□□□□ -0.45
SMARCD3-208ENST00000472789 ADGRF4Q8IZF3 695 aa12.24□□□□□ -0.45
SMARCD3-208ENST00000472789 PIBF1Q8WXW3 757 aa12.24□□□□□ -0.45
SMARCD3-208ENST00000472789 AGBL1Q96MI9 1066 aa12.24□□□□□ -0.45
SMARCD3-208ENST00000472789 NUDT12Q9BQG2 462 aa12.24□□□□□ -0.45
SMARCD3-208ENST00000472789 MAD2L2Q9UI95 211 aa12.24□□□□□ -0.45
SMARCD3-208ENST00000472789 TPCN1Q9ULQ1 816 aa12.24□□□□□ -0.45
SMARCD3-208ENST00000472789 GOLGA8AA7E2F4 631 aa12.23□□□□□ -0.45
SMARCD3-208ENST00000472789 GOLGA8BA8MQT2 603 aa12.23□□□□□ -0.45
SMARCD3-208ENST00000472789 ZBTB43O43298 467 aa12.23□□□□□ -0.45
SMARCD3-208ENST00000472789 PFKFB2O60825 505 aa12.23□□□□□ -0.45
SMARCD3-208ENST00000472789 CDKL5O76039 1030 aa12.23□□□□□ -0.45
SMARCD3-208ENST00000472789 MYCP01106 439 aaPredicted RBP12.23□□□□□ -0.45
SMARCD3-208ENST00000472789 FCER1AP12319 257 aa12.23□□□□□ -0.45
SMARCD3-208ENST00000472789 TAL1P17542 331 aaPredicted RBP12.23□□□□□ -0.45
SMARCD3-208ENST00000472789 PTPREP23469 700 aa12.23□□□□□ -0.45
SMARCD3-208ENST00000472789 OAZ1P54368 228 aa12.23□□□□□ -0.45
SMARCD3-208ENST00000472789 KCTD2Q14681 263 aa12.23□□□□□ -0.45
SMARCD3-208ENST00000472789 CDC37Q16543 378 aaPredicted RBP12.23□□□□□ -0.45
SMARCD3-208ENST00000472789 ME3Q16798 604 aa12.23□□□□□ -0.45
SMARCD3-208ENST00000472789 USH1GQ495M9 461 aa12.23□□□□□ -0.45
SMARCD3-208ENST00000472789 SLC9C1Q4G0N8 1177 aa12.23□□□□□ -0.45
SMARCD3-208ENST00000472789 HOMER1Q86YM7 354 aa12.23□□□□□ -0.45
SMARCD3-208ENST00000472789 SOCS4Q8WXH5 440 aa12.23□□□□□ -0.45
SMARCD3-208ENST00000472789 MMP19Q99542 508 aa12.23□□□□□ -0.45
SMARCD3-208ENST00000472789 LLPHQ9BRT6 129 aaKnown RBP12.23□□□□□ -0.45
SMARCD3-208ENST00000472789 RANBP17Q9H2T7 1088 aaKnown RBP12.23□□□□□ -0.45
SMARCD3-208ENST00000472789 RNF146Q9NTX7 359 aa12.23□□□□□ -0.45
SMARCD3-208ENST00000472789 BRPF3Q9ULD4 1205 aa12.23□□□□□ -0.45
SMARCD3-208ENST00000472789 CIZ1Q9ULV3 898 aaPredicted RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms