RNA–Protein interactions for RNA: ENST00000472608.5

ABCF3-209, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 657 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-209ENST00000472608 ORC4O43929 436 aa16.87■□□□□ 0.29
ABCF3-209ENST00000472608 PQBP1O60828 265 aaKnown RBP16.87■□□□□ 0.29
ABCF3-209ENST00000472608 SEPT2Q15019 361 aa16.87■□□□□ 0.29
ABCF3-209ENST00000472608 TMEM240Q5SV17 173 aa16.87■□□□□ 0.29
ABCF3-209ENST00000472608 MFSD5Q6N075 450 aa16.87■□□□□ 0.29
ABCF3-209ENST00000472608 CASC1Q6TDU7 716 aa16.87■□□□□ 0.29
ABCF3-209ENST00000472608 PPM1EQ8WY54 764 aa16.87■□□□□ 0.29
ABCF3-209ENST00000472608 C1QTNF1Q9BXJ1 281 aa16.87■□□□□ 0.29
ABCF3-209ENST00000472608 PRDM12Q9H4Q4 367 aa16.87■□□□□ 0.29
ABCF3-209ENST00000472608 KANSL2Q9H9L4 492 aa16.87■□□□□ 0.29
ABCF3-209ENST00000472608 TBX21Q9UL17 535 aa16.87■□□□□ 0.29
ABCF3-209ENST00000472608 MYH8P13535 1937 aa16.87■□□□□ 0.29
ABCF3-209ENST00000472608 CHD7Q9P2D1 2997 aa16.87■□□□□ 0.29
ABCF3-209ENST00000472608 A0A0G2JMZ2 1700 aa16.87■□□□□ 0.29
ABCF3-209ENST00000472608 A0A1W2PRG0 241 aa16.86■□□□□ 0.29
ABCF3-209ENST00000472608 ZNF213O14771 459 aa16.86■□□□□ 0.29
ABCF3-209ENST00000472608 ADAMTS4O75173 837 aa16.86■□□□□ 0.29
ABCF3-209ENST00000472608 CDC45O75419 566 aa16.86■□□□□ 0.29
ABCF3-209ENST00000472608 PGK1P00558 417 aa16.86■□□□□ 0.29
ABCF3-209ENST00000472608 DSG3P32926 999 aa16.86■□□□□ 0.29
ABCF3-209ENST00000472608 PBX2P40425 430 aa16.86■□□□□ 0.29
ABCF3-209ENST00000472608 ESYT1Q9BSJ8 1104 aa16.86■□□□□ 0.29
ABCF3-209ENST00000472608 PIEZO1Q92508 2521 aa16.85■□□□□ 0.29
ABCF3-209ENST00000472608 DCDC2CA8MYV0 355 aa16.85■□□□□ 0.29
ABCF3-209ENST00000472608 CTDSPL2Q05D32 466 aa16.85■□□□□ 0.29
ABCF3-209ENST00000472608 IMMTQ16891 758 aaKnown RBP16.85■□□□□ 0.29
ABCF3-209ENST00000472608 PPP4R3BQ5MIZ7 849 aa16.85■□□□□ 0.29
ABCF3-209ENST00000472608 NEDD1Q8NHV4 660 aa16.85■□□□□ 0.29
ABCF3-209ENST00000472608 STAG1Q8WVM7 1258 aa16.85■□□□□ 0.29
ABCF3-209ENST00000472608 MAP4K1Q92918 833 aa16.85■□□□□ 0.29
ABCF3-209ENST00000472608 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.85■□□□□ 0.29
ABCF3-209ENST00000472608 RNF41Q9H4P4 317 aaPredicted RBP16.85■□□□□ 0.29
ABCF3-209ENST00000472608 SH2D4AQ9H788 454 aa16.85■□□□□ 0.29
ABCF3-209ENST00000472608 DIS3Q9Y2L1 958 aaKnown RBP16.85■□□□□ 0.29
ABCF3-209ENST00000472608 U3KPZ7 1027 aaPredicted RBP16.85■□□□□ 0.29
ABCF3-209ENST00000472608 PLIN4Q96Q06 1357 aa16.85■□□□□ 0.29
ABCF3-209ENST00000472608 IGKV6D-41A0A0C4DH26 115 aa16.84■□□□□ 0.29
ABCF3-209ENST00000472608 GRXCR1A8MXD5 290 aa16.84■□□□□ 0.29
ABCF3-209ENST00000472608 ZNF865P0CJ78 1059 aaPredicted RBP16.84■□□□□ 0.29
ABCF3-209ENST00000472608 FCER1AP12319 257 aa16.84■□□□□ 0.29
ABCF3-209ENST00000472608 BMP1P13497 986 aa16.84■□□□□ 0.29
ABCF3-209ENST00000472608 ICA1Q05084 483 aa16.84■□□□□ 0.29
ABCF3-209ENST00000472608 PPIGQ13427 754 aaKnown RBP eCLIP16.84■□□□□ 0.291e-7■■■■□ 22.6
ABCF3-209ENST00000472608 CCSAPQ6IQ19 270 aaPredicted RBP16.84■□□□□ 0.29
ABCF3-209ENST00000472608 CCDC174Q6PII3 467 aa16.84■□□□□ 0.29
ABCF3-209ENST00000472608 KIAA1211Q6ZU35 1233 aa16.84■□□□□ 0.29
ABCF3-209ENST00000472608 SIAH1Q8IUQ4 282 aa16.84■□□□□ 0.29
ABCF3-209ENST00000472608 KLHDC9Q8NEP7 349 aa16.84■□□□□ 0.29
ABCF3-209ENST00000472608 TINF2Q9BSI4 451 aa16.84■□□□□ 0.29
ABCF3-209ENST00000472608 ARHGEF10LQ9HCE6 1279 aa16.84■□□□□ 0.29
ABCF3-209ENST00000472608 CXXC1Q9P0U4 656 aaPredicted RBP16.84■□□□□ 0.29
ABCF3-209ENST00000472608 NYAP2Q9P242 653 aa16.84■□□□□ 0.29
ABCF3-209ENST00000472608 SYNPO2Q9UMS6 1093 aa16.84■□□□□ 0.29
ABCF3-209ENST00000472608 TMX2Q9Y320 296 aa16.84■□□□□ 0.29
ABCF3-209ENST00000472608 MOXD2PA6NHM9 499 aa16.83■□□□□ 0.28
ABCF3-209ENST00000472608 PRDM1O75626 825 aa16.83■□□□□ 0.28
ABCF3-209ENST00000472608 AKR1A1P14550 325 aa16.83■□□□□ 0.28
ABCF3-209ENST00000472608 TAL1P17542 331 aaPredicted RBP16.83■□□□□ 0.28
ABCF3-209ENST00000472608 CDK7P50613 346 aa16.83■□□□□ 0.28
ABCF3-209ENST00000472608 ACLYP53396 1101 aa16.83■□□□□ 0.28
ABCF3-209ENST00000472608 PTH1RQ03431 593 aa16.83■□□□□ 0.28
ABCF3-209ENST00000472608 ZNF792Q3KQV3 632 aa16.83■□□□□ 0.28
ABCF3-209ENST00000472608 MFSD6Q6ZSS7 791 aa16.83■□□□□ 0.28
ABCF3-209ENST00000472608 NCAPG2Q86XI2 1143 aa16.83■□□□□ 0.28
ABCF3-209ENST00000472608 STK11IPQ8N1F8 1099 aa16.83■□□□□ 0.28
ABCF3-209ENST00000472608 NUP133Q8WUM0 1156 aa16.83■□□□□ 0.28
ABCF3-209ENST00000472608 MKL1Q969V6 931 aa16.83■□□□□ 0.28
ABCF3-209ENST00000472608 GREB1LQ9C091 1923 aaPredicted RBP16.83■□□□□ 0.28
ABCF3-209ENST00000472608 STARD7Q9NQZ5 370 aa16.83■□□□□ 0.28
ABCF3-209ENST00000472608 SLC25A27O95847 323 aa16.82■□□□□ 0.28
ABCF3-209ENST00000472608 TSPY3P0CV98 308 aa16.82■□□□□ 0.28
ABCF3-209ENST00000472608 TSPY8P0CW00 308 aa16.82■□□□□ 0.28
ABCF3-209ENST00000472608 HAND2P61296 217 aa16.82■□□□□ 0.28
ABCF3-209ENST00000472608 TFAP4Q01664 338 aa16.82■□□□□ 0.28
ABCF3-209ENST00000472608 RAB30Q15771 203 aa16.82■□□□□ 0.28
ABCF3-209ENST00000472608 KIAA1755Q5JYT7 1200 aa16.82■□□□□ 0.28
ABCF3-209ENST00000472608 TANGO6Q9C0B7 1094 aa16.82■□□□□ 0.28
ABCF3-209ENST00000472608 MTMR4Q9NYA4 1195 aa16.82■□□□□ 0.28
ABCF3-209ENST00000472608 ADAMTS5Q9UNA0 930 aa16.82■□□□□ 0.28
ABCF3-209ENST00000472608 PLXNA1Q9UIW2 1896 aa16.82■□□□□ 0.28
ABCF3-209ENST00000472608 REV3LO60673 3130 aa16.81■□□□□ 0.28
ABCF3-209ENST00000472608 ELP1O95163 1332 aa16.81■□□□□ 0.28
ABCF3-209ENST00000472608 MROH7Q68CQ1 1323 aa16.81■□□□□ 0.28
ABCF3-209ENST00000472608 ZNFX1Q9P2E3 1918 aaKnown RBP16.81■□□□□ 0.28
ABCF3-209ENST00000472608 TSPY2A6NKD2 308 aa16.81■□□□□ 0.28
ABCF3-209ENST00000472608 EEF2P13639 858 aaKnown RBP16.81■□□□□ 0.28
ABCF3-209ENST00000472608 NOVP48745 357 aa16.81■□□□□ 0.28
ABCF3-209ENST00000472608 CCDC85BQ15834 202 aaPredicted RBP16.81■□□□□ 0.28
ABCF3-209ENST00000472608 PSRC1Q6PGN9 363 aaPredicted RBP16.81■□□□□ 0.28
ABCF3-209ENST00000472608 IL27Q8NEV9 243 aa16.81■□□□□ 0.28
ABCF3-209ENST00000472608 ATG4CQ96DT6 458 aa16.81■□□□□ 0.28
ABCF3-209ENST00000472608 LSG1Q9H089 658 aaKnown RBP16.81■□□□□ 0.28
ABCF3-209ENST00000472608 TCP11L1Q9NUJ3 509 aa16.81■□□□□ 0.28
ABCF3-209ENST00000472608 SYNRGQ9UMZ2 1314 aa16.8■□□□□ 0.28
ABCF3-209ENST00000472608 RANBP6O60518 1105 aaKnown RBP16.8■□□□□ 0.28
ABCF3-209ENST00000472608 TTLL1O95922 423 aa16.8■□□□□ 0.28
ABCF3-209ENST00000472608 CSF2RAP15509 400 aa16.8■□□□□ 0.28
ABCF3-209ENST00000472608 CST5P28325 142 aaPredicted RBP16.8■□□□□ 0.28
ABCF3-209ENST00000472608 PLS1Q14651 629 aa16.8■□□□□ 0.28
ABCF3-209ENST00000472608 TMEM132BQ14DG7 1078 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms