RNA–Protein interactions for RNA: ENST00000472397.5

SCAMP3-205, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 3

Gene SCAMP3, Length 1,030 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-205ENST00000472397 ARMCX2Q7L311 632 aa12.07□□□□□ -0.48
SCAMP3-205ENST00000472397 CCDC144CPQ8IYA2 1237 aa12.07□□□□□ -0.48
SCAMP3-205ENST00000472397 AGBL1Q96MI9 1066 aa12.07□□□□□ -0.48
SCAMP3-205ENST00000472397 PDGFCQ9NRA1 345 aa12.07□□□□□ -0.48
SCAMP3-205ENST00000472397 ECHDC1Q9NTX5 307 aa12.07□□□□□ -0.48
SCAMP3-205ENST00000472397 ARPP21Q9UBL0 812 aaPredicted RBP12.07□□□□□ -0.48
SCAMP3-205ENST00000472397 DNAJC25-GNG10A0A024R161 153 aa12.06□□□□□ -0.48
SCAMP3-205ENST00000472397 SOWAHBA6NEL2 793 aa12.06□□□□□ -0.48
SCAMP3-205ENST00000472397 TMEM232C9JQI7 657 aa12.06□□□□□ -0.48
SCAMP3-205ENST00000472397 RNF113AO15541 343 aaKnown RBP12.06□□□□□ -0.48
SCAMP3-205ENST00000472397 GPAA1O43292 621 aa12.06□□□□□ -0.48
SCAMP3-205ENST00000472397 IGFBP4P22692 258 aa12.06□□□□□ -0.48
SCAMP3-205ENST00000472397 PSMC6P62333 389 aa12.06□□□□□ -0.48
SCAMP3-205ENST00000472397 TMEM240Q5SV17 173 aa12.06□□□□□ -0.48
SCAMP3-205ENST00000472397 CCSAPQ6IQ19 270 aaPredicted RBP12.06□□□□□ -0.48
SCAMP3-205ENST00000472397 ZSCAN25Q6NSZ9 544 aa12.06□□□□□ -0.48
SCAMP3-205ENST00000472397 MICALL1Q8N3F8 863 aa12.06□□□□□ -0.48
SCAMP3-205ENST00000472397 PRPF38AQ8NAV1 312 aaKnown RBP12.06□□□□□ -0.48
SCAMP3-205ENST00000472397 OTUD7AQ8TE49 926 aaPredicted RBP12.06□□□□□ -0.48
SCAMP3-205ENST00000472397 NUP133Q8WUM0 1156 aa12.06□□□□□ -0.48
SCAMP3-205ENST00000472397 GLT1D1Q96MS3 346 aa12.06□□□□□ -0.48
SCAMP3-205ENST00000472397 TSEN34Q9BSV6 310 aaKnown RBP12.06□□□□□ -0.48
SCAMP3-205ENST00000472397 PBX4Q9BYU1 374 aa12.06□□□□□ -0.48
SCAMP3-205ENST00000472397 NKX2-4Q9H2Z4 354 aa12.06□□□□□ -0.48
SCAMP3-205ENST00000472397 NYAP2Q9P242 653 aa12.06□□□□□ -0.48
SCAMP3-205ENST00000472397 NRBP1Q9UHY1 535 aa12.06□□□□□ -0.48
SCAMP3-205ENST00000472397 TBX21Q9UL17 535 aa12.06□□□□□ -0.48
SCAMP3-205ENST00000472397 MCM3APO60318 1980 aa12.05□□□□□ -0.48
SCAMP3-205ENST00000472397 IGKV6D-41A0A0C4DH26 115 aa12.05□□□□□ -0.48
SCAMP3-205ENST00000472397 DYNC1LI2O43237 492 aaPredicted RBP12.05□□□□□ -0.48
SCAMP3-205ENST00000472397 NMT2O60551 498 aa12.05□□□□□ -0.48
SCAMP3-205ENST00000472397 DUSP11O75319 330 aaKnown RBP12.05□□□□□ -0.48
SCAMP3-205ENST00000472397 ALAS1P13196 640 aa12.05□□□□□ -0.48
SCAMP3-205ENST00000472397 MYOGP15173 224 aa12.05□□□□□ -0.48
SCAMP3-205ENST00000472397 MCCP23508 829 aa12.05□□□□□ -0.48
SCAMP3-205ENST00000472397 RABGGTBP53611 331 aa12.05□□□□□ -0.48
SCAMP3-205ENST00000472397 TFAP4Q01664 338 aa12.05□□□□□ -0.48
SCAMP3-205ENST00000472397 CTDSPL2Q05D32 466 aa12.05□□□□□ -0.48
SCAMP3-205ENST00000472397 SBK1Q52WX2 424 aa12.05□□□□□ -0.48
SCAMP3-205ENST00000472397 DIEXFQ68CQ4 756 aaKnown RBP12.05□□□□□ -0.48
SCAMP3-205ENST00000472397 MFSD5Q6N075 450 aa12.05□□□□□ -0.48
SCAMP3-205ENST00000472397 KCTD1Q719H9 257 aa12.05□□□□□ -0.48
SCAMP3-205ENST00000472397 OTOP2Q7RTS6 562 aa12.05□□□□□ -0.48
SCAMP3-205ENST00000472397 ANKRD33Q7Z3H0 272 aa12.05□□□□□ -0.48
SCAMP3-205ENST00000472397 APPBP2Q92624 585 aa12.05□□□□□ -0.48
SCAMP3-205ENST00000472397 TRPV6Q9H1D0 765 aa12.05□□□□□ -0.48
SCAMP3-205ENST00000472397 SLC38A10Q9HBR0 1119 aa12.05□□□□□ -0.48
SCAMP3-205ENST00000472397 CXXC1Q9P0U4 656 aaPredicted RBP12.05□□□□□ -0.48
SCAMP3-205ENST00000472397 ASTN1O14525 1302 aa12.05□□□□□ -0.48
SCAMP3-205ENST00000472397 MYH7P12883 1935 aa12.04□□□□□ -0.48
SCAMP3-205ENST00000472397 MOXD2PA6NHM9 499 aa12.04□□□□□ -0.48
SCAMP3-205ENST00000472397 ARVCFO00192 962 aa12.04□□□□□ -0.48
SCAMP3-205ENST00000472397 CTAGE5O15320 804 aa12.04□□□□□ -0.48
SCAMP3-205ENST00000472397 MS4A1P11836 297 aa12.04□□□□□ -0.48
SCAMP3-205ENST00000472397 BMP3P12645 472 aa12.04□□□□□ -0.48
SCAMP3-205ENST00000472397 COPB2P35606 906 aa12.04□□□□□ -0.48
SCAMP3-205ENST00000472397 CDK7P50613 346 aa12.04□□□□□ -0.48
SCAMP3-205ENST00000472397 TNFAIP2Q03169 654 aa12.04□□□□□ -0.48
SCAMP3-205ENST00000472397 ADGRE1Q14246 886 aa12.04□□□□□ -0.48
SCAMP3-205ENST00000472397 MUM1L1Q5H9M0 696 aa12.04□□□□□ -0.48
SCAMP3-205ENST00000472397 FBXO16Q8IX29 292 aaPredicted RBP12.04□□□□□ -0.48
SCAMP3-205ENST00000472397 IFNL3Q8IZI9 196 aa12.04□□□□□ -0.48
SCAMP3-205ENST00000472397 KBTBD3Q8NAB2 608 aa12.04□□□□□ -0.48
SCAMP3-205ENST00000472397 SCLYQ96I15 445 aa12.04□□□□□ -0.48
SCAMP3-205ENST00000472397 RNF146Q9NTX7 359 aa12.04□□□□□ -0.48
SCAMP3-205ENST00000472397 MTMR4Q9NYA4 1195 aa12.04□□□□□ -0.48
SCAMP3-205ENST00000472397 FEM1BQ9UK73 627 aa12.04□□□□□ -0.48
SCAMP3-205ENST00000472397 RCAN3Q9UKA8 241 aa12.04□□□□□ -0.48
SCAMP3-205ENST00000472397 SYNGAP1Q96PV0 1343 aa12.04□□□□□ -0.48
SCAMP3-205ENST00000472397 A0A0U1RQG5 324 aaPredicted RBP12.03□□□□□ -0.48
SCAMP3-205ENST00000472397 RFXAPO00287 272 aa12.03□□□□□ -0.48
SCAMP3-205ENST00000472397 TSPY3P0CV98 308 aa12.03□□□□□ -0.48
SCAMP3-205ENST00000472397 TSPY8P0CW00 308 aa12.03□□□□□ -0.48
SCAMP3-205ENST00000472397 GJA9P57773 515 aa12.03□□□□□ -0.48
SCAMP3-205ENST00000472397 CHMP4BP1P59074 171 aa12.03□□□□□ -0.48
SCAMP3-205ENST00000472397 PPIGQ13427 754 aaKnown RBP eCLIP12.03□□□□□ -0.48
SCAMP3-205ENST00000472397 MAMDC4Q6UXC1 1216 aa12.03□□□□□ -0.48
SCAMP3-205ENST00000472397 FAM126BQ8IXS8 530 aa12.03□□□□□ -0.48
SCAMP3-205ENST00000472397 NECAB3Q96P71 396 aaPredicted RBP12.03□□□□□ -0.48
SCAMP3-205ENST00000472397 TRERF1Q96PN7 1200 aa12.03□□□□□ -0.48
SCAMP3-205ENST00000472397 KATNBL1Q9H079 304 aa12.03□□□□□ -0.48
SCAMP3-205ENST00000472397 ABHD16BQ9H3Z7 469 aa12.03□□□□□ -0.48
SCAMP3-205ENST00000472397 CERS4Q9HA82 394 aa12.03□□□□□ -0.48
SCAMP3-205ENST00000472397 SPC25Q9HBM1 224 aa12.03□□□□□ -0.48
SCAMP3-205ENST00000472397 A1CFQ9NQ94 594 aaKnown RBP12.03□□□□□ -0.48
SCAMP3-205ENST00000472397 YBX2Q9Y2T7 364 aaKnown RBP12.03□□□□□ -0.48
SCAMP3-205ENST00000472397 PRUNE2Q8WUY3 3088 aa12.03□□□□□ -0.48
SCAMP3-205ENST00000472397 PATL2C9JE40 543 aaKnown RBP12.02□□□□□ -0.49
SCAMP3-205ENST00000472397 TLR3O15455 904 aaKnown RBP12.02□□□□□ -0.49
SCAMP3-205ENST00000472397 TTLL1O95922 423 aa12.02□□□□□ -0.49
SCAMP3-205ENST00000472397 SMPD1P17405 629 aa12.02□□□□□ -0.49
SCAMP3-205ENST00000472397 SLC16A2P36021 539 aa12.02□□□□□ -0.49
SCAMP3-205ENST00000472397 TTBK2Q6IQ55 1244 aa12.02□□□□□ -0.49
SCAMP3-205ENST00000472397 NSMFQ6X4W1 530 aa12.02□□□□□ -0.49
SCAMP3-205ENST00000472397 TLK2Q86UE8 772 aa12.02□□□□□ -0.49
SCAMP3-205ENST00000472397 TMEM199Q8N511 208 aa12.02□□□□□ -0.49
SCAMP3-205ENST00000472397 PCSK9Q8NBP7 692 aaKnown RBP12.02□□□□□ -0.49
SCAMP3-205ENST00000472397 TOX2Q96NM4 488 aa12.02□□□□□ -0.49
SCAMP3-205ENST00000472397 GAS2L1Q99501 681 aaPredicted RBP12.02□□□□□ -0.49
SCAMP3-205ENST00000472397 UPF3AQ9H1J1 476 aaKnown RBP12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms