RNA–Protein interactions for RNA: ENST00000471862.1

COL4A3-205, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 5

Gene COL4A3, Length 755 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-205ENST00000471862 DSCC1Q9BVC3 393 aa13.6□□□□□ -0.23
COL4A3-205ENST00000471862 TOMM22Q9NS69 142 aa13.6□□□□□ -0.23
COL4A3-205ENST00000471862 NEDD4P46934 1319 aa13.6□□□□□ -0.23
COL4A3-205ENST00000471862 LRRC37A2A6NM11 1700 aa13.59□□□□□ -0.23
COL4A3-205ENST00000471862 ZNF213O14771 459 aa13.59□□□□□ -0.23
COL4A3-205ENST00000471862 SNHG28P0DPA3 235 aa13.59□□□□□ -0.23
COL4A3-205ENST00000471862 SYN1P17600 705 aa13.59□□□□□ -0.23
COL4A3-205ENST00000471862 BMP8BP34820 402 aa13.59□□□□□ -0.23
COL4A3-205ENST00000471862 SLC4A3P48751 1232 aa13.59□□□□□ -0.23
COL4A3-205ENST00000471862 NT5C2P49902 561 aa13.59□□□□□ -0.23
COL4A3-205ENST00000471862 IKQ13123 557 aaPredicted RBP13.59□□□□□ -0.23
COL4A3-205ENST00000471862 TKFCQ3LXA3 575 aa13.59□□□□□ -0.23
COL4A3-205ENST00000471862 TTC22Q5TAA0 569 aa13.59□□□□□ -0.23
COL4A3-205ENST00000471862 TTBK2Q6IQ55 1244 aa13.59□□□□□ -0.23
COL4A3-205ENST00000471862 MFSD6Q6ZSS7 791 aa13.59□□□□□ -0.23
COL4A3-205ENST00000471862 TTC14Q96N46 770 aa13.59□□□□□ -0.23
COL4A3-205ENST00000471862 RANBP17Q9H2T7 1088 aaKnown RBP13.59□□□□□ -0.23
COL4A3-205ENST00000471862 RNF41Q9H4P4 317 aaPredicted RBP13.59□□□□□ -0.23
COL4A3-205ENST00000471862 ACAD9Q9H845 621 aa13.59□□□□□ -0.23
COL4A3-205ENST00000471862 A1CFQ9NQ94 594 aaKnown RBP13.59□□□□□ -0.23
COL4A3-205ENST00000471862 RNF146Q9NTX7 359 aa13.59□□□□□ -0.23
COL4A3-205ENST00000471862 ISY1Q9ULR0 285 aaKnown RBP13.59□□□□□ -0.23
COL4A3-205ENST00000471862 SZT2Q5T011 3432 aa13.58□□□□□ -0.23
COL4A3-205ENST00000471862 LTBP2Q14767 1821 aa13.58□□□□□ -0.24
COL4A3-205ENST00000471862 KBTBD13C9JR72 458 aa13.58□□□□□ -0.24
COL4A3-205ENST00000471862 RARBP10826 455 aa13.58□□□□□ -0.24
COL4A3-205ENST00000471862 PDHBP11177 359 aa13.58□□□□□ -0.24
COL4A3-205ENST00000471862 AKR1A1P14550 325 aa13.58□□□□□ -0.24
COL4A3-205ENST00000471862 SNX17Q15036 470 aa13.58□□□□□ -0.24
COL4A3-205ENST00000471862 ANKRD35Q8N283 1001 aa13.58□□□□□ -0.24
COL4A3-205ENST00000471862 FAM133AQ8N9E0 248 aa13.58□□□□□ -0.24
COL4A3-205ENST00000471862 XPNPEP3Q9NQH7 507 aa13.58□□□□□ -0.24
COL4A3-205ENST00000471862 MTMR7Q9Y216 660 aa13.58□□□□□ -0.24
COL4A3-205ENST00000471862 LAMA3Q16787 3333 aa13.58□□□□□ -0.24
COL4A3-205ENST00000471862 ADAMTS4O75173 837 aa13.57□□□□□ -0.24
COL4A3-205ENST00000471862 MAGEA10P43363 369 aaPredicted RBP13.57□□□□□ -0.24
COL4A3-205ENST00000471862 ATN1P54259 1190 aaPredicted RBP13.57□□□□□ -0.24
COL4A3-205ENST00000471862 SNAP25P60880 206 aa13.57□□□□□ -0.24
COL4A3-205ENST00000471862 CNTN2Q02246 1040 aa13.57□□□□□ -0.24
COL4A3-205ENST00000471862 CCDC96Q2M329 555 aa13.57□□□□□ -0.24
COL4A3-205ENST00000471862 SYDE2Q5VT97 1194 aa13.57□□□□□ -0.24
COL4A3-205ENST00000471862 CCDC174Q6PII3 467 aa13.57□□□□□ -0.24
COL4A3-205ENST00000471862 SLC39A5Q6ZMH5 540 aa13.57□□□□□ -0.24
COL4A3-205ENST00000471862 ESR2Q92731 530 aa13.57□□□□□ -0.24
COL4A3-205ENST00000471862 LENG1Q96BZ8 264 aaPredicted RBP13.57□□□□□ -0.24
COL4A3-205ENST00000471862 TRERF1Q96PN7 1200 aa13.57□□□□□ -0.24
COL4A3-205ENST00000471862 KATNBL1Q9H079 304 aa13.57□□□□□ -0.24
COL4A3-205ENST00000471862 HOMER2Q9NSB8 354 aa13.57□□□□□ -0.24
COL4A3-205ENST00000471862 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.57□□□□□ -0.24
COL4A3-205ENST00000471862 PCDH10Q9P2E7 1040 aa13.57□□□□□ -0.24
COL4A3-205ENST00000471862 PHF24Q9UPV7 400 aa13.57□□□□□ -0.24
COL4A3-205ENST00000471862 CNPY2Q9Y2B0 182 aa13.57□□□□□ -0.24
COL4A3-205ENST00000471862 RAD50Q92878 1312 aa13.57□□□□□ -0.24
COL4A3-205ENST00000471862 SOWAHBA6NEL2 793 aa13.56□□□□□ -0.24
COL4A3-205ENST00000471862 POTEB2H3BUK9 544 aa13.56□□□□□ -0.24
COL4A3-205ENST00000471862 PGK1P00558 417 aa13.56□□□□□ -0.24
COL4A3-205ENST00000471862 ICAM1P05362 532 aa13.56□□□□□ -0.24
COL4A3-205ENST00000471862 ALAS1P13196 640 aa13.56□□□□□ -0.24
COL4A3-205ENST00000471862 SLC16A2P36021 539 aa13.56□□□□□ -0.24
COL4A3-205ENST00000471862 RTP1P59025 263 aa13.56□□□□□ -0.24
COL4A3-205ENST00000471862 ZNF543Q08ER8 600 aa13.56□□□□□ -0.24
COL4A3-205ENST00000471862 ACVR2BQ13705 512 aa13.56□□□□□ -0.24
COL4A3-205ENST00000471862 MUM1L1Q5H9M0 696 aa13.56□□□□□ -0.24
COL4A3-205ENST00000471862 C1orf53Q5VUE5 145 aa13.56□□□□□ -0.24
COL4A3-205ENST00000471862 ARMCX2Q7L311 632 aa13.56□□□□□ -0.24
COL4A3-205ENST00000471862 DGKHQ86XP1 1220 aa13.56□□□□□ -0.24
COL4A3-205ENST00000471862 ANKS1AQ92625 1134 aa13.56□□□□□ -0.24
COL4A3-205ENST00000471862 FAM184BQ9ULE4 1060 aa13.56□□□□□ -0.24
COL4A3-205ENST00000471862 ASTN1O14525 1302 aa13.56□□□□□ -0.24
COL4A3-205ENST00000471862 FRMPD2Q68DX3 1309 aaPredicted RBP13.56□□□□□ -0.24
COL4A3-205ENST00000471862 ADCY6O43306 1168 aa13.55□□□□□ -0.24
COL4A3-205ENST00000471862 KDM4AO75164 1064 aa13.55□□□□□ -0.24
COL4A3-205ENST00000471862 ADCYAP1R1P41586 468 aa13.55□□□□□ -0.24
COL4A3-205ENST00000471862 CCSAPQ6IQ19 270 aaPredicted RBP13.55□□□□□ -0.24
COL4A3-205ENST00000471862 RNF180Q86T96 592 aa13.55□□□□□ -0.24
COL4A3-205ENST00000471862 CCDC144CPQ8IYA2 1237 aa13.55□□□□□ -0.24
COL4A3-205ENST00000471862 KLHDC9Q8NEP7 349 aa13.55□□□□□ -0.24
COL4A3-205ENST00000471862 ZKSCAN3Q9BRR0 538 aa13.55□□□□□ -0.24
COL4A3-205ENST00000471862 ABHD16BQ9H3Z7 469 aa13.55□□□□□ -0.24
COL4A3-205ENST00000471862 GPCPD1Q9NPB8 672 aa13.55□□□□□ -0.24
COL4A3-205ENST00000471862 CYP39A1Q9NYL5 469 aa13.55□□□□□ -0.24
COL4A3-205ENST00000471862 CTNNA3Q9UI47 895 aa13.55□□□□□ -0.24
COL4A3-205ENST00000471862 ZHX1Q9UKY1 873 aaPredicted RBP13.55□□□□□ -0.24
COL4A3-205ENST00000471862 CCPG1Q9ULG6 757 aa13.55□□□□□ -0.24
COL4A3-205ENST00000471862 SYNRGQ9UMZ2 1314 aa13.55□□□□□ -0.24
COL4A3-205ENST00000471862 B4E1Z4 1266 aa13.54□□□□□ -0.24
COL4A3-205ENST00000471862 DUSP11O75319 330 aaKnown RBP13.54□□□□□ -0.24
COL4A3-205ENST00000471862 CHMLP26374 656 aa13.54□□□□□ -0.24
COL4A3-205ENST00000471862 CST5P28325 142 aaPredicted RBP13.54□□□□□ -0.24
COL4A3-205ENST00000471862 IMMTQ16891 758 aaKnown RBP13.54□□□□□ -0.24
COL4A3-205ENST00000471862 CCDC178Q5BJE1 867 aa13.54□□□□□ -0.24
COL4A3-205ENST00000471862 IQCA1Q86XH1 822 aa13.54□□□□□ -0.24
COL4A3-205ENST00000471862 TSEN34Q9BSV6 310 aaKnown RBP13.54□□□□□ -0.24
COL4A3-205ENST00000471862 UPF3AQ9H1J1 476 aaKnown RBP13.54□□□□□ -0.24
COL4A3-205ENST00000471862 ZSWIM5Q9P217 1185 aa13.54□□□□□ -0.24
COL4A3-205ENST00000471862 SOX1O00570 391 aaPredicted RBP13.53□□□□□ -0.24
COL4A3-205ENST00000471862 MYCNP04198 464 aaPredicted RBP13.53□□□□□ -0.24
COL4A3-205ENST00000471862 NKX3-2P78367 333 aa13.53□□□□□ -0.24
COL4A3-205ENST00000471862 CCDC144BQ3MJ40 725 aa13.53□□□□□ -0.24
COL4A3-205ENST00000471862 TRIM60Q495X7 471 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms