RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 SPATA5Q8NB90 893 aa14.49□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 BAIAP2L1Q9UHR4 511 aa14.49□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 AMFRQ9UKV5 643 aa14.49□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 A6NJR5 290 aa14.49□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 SLC27A2O14975 620 aa14.49□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 TLR3O15455 904 aaKnown RBP14.49□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 TNFAIP1Q13829 316 aa14.49□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 BRD3Q15059 726 aa14.49□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 CFAP221Q4G0U5 840 aa14.49□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 TNNI3KQ59H18 835 aa14.49□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 CHURC1Q8WUH1 139 aa14.49□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 GLT8D2Q9H1C3 349 aa14.49□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 PSTPIP2Q9H939 334 aa14.49□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 VCX3AQ9NNX9 186 aa14.49□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 FPGT-TNNI3KV9GXZ4 949 aa14.49□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 PTPN23Q9H3S7 1636 aa14.49□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 GIGYF1O75420 1035 aaPredicted RBP14.49□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 TSNAXIP1Q2TAA8 658 aa14.49□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 CCDC93Q567U6 631 aa14.49□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 SDCCAG3Q96C92 435 aa14.49□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 S100BP04271 92 aaPredicted RBP14.49□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 CLNS1AP54105 237 aaKnown RBP14.49□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 YWHAEP62258 255 aaKnown RBP14.49□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 FANCCQ00597 558 aa14.49□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 FAM178BQ8IXR5 827 aa14.49□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 PRPF38AQ8NAV1 312 aaKnown RBP14.49□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 C1orf112Q9NSG2 853 aa14.49□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 RGS16O15492 202 aaPredicted RBP14.49□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 KHDRBS2Q5VWX1 349 aaKnown RBP14.49□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 SYCE1Q8N0S2 351 aa14.49□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 SCHIP1Q9P0W5 487 aaPredicted RBP14.49□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 MAP10Q9P2G4 905 aa14.49□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 IPO11Q9UI26 975 aaKnown RBP14.49□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 SETSIPP0DME0 302 aa14.48□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 CHMLP26374 656 aa14.48□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 APPBP2Q92624 585 aa14.48□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 ADKP55263 362 aaKnown RBP14.48□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 HAUS1Q96CS2 278 aa14.48□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 PRDM5Q9NQX1 630 aaPredicted RBP14.48□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 SLC13A4Q9UKG4 626 aa14.48□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 CCPG1Q9ULG6 757 aa14.48□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 CC2D2AQ9P2K1 1620 aa14.48□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 INPP5BP32019 993 aa14.48□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 PPP1R2P41236 205 aa14.48□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 ZAP70P43403 619 aa14.48□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 OSTNP61366 133 aa14.48□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 HADHQ16836 314 aaKnown RBP14.48□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 CCNYQ8ND76 341 aa14.48□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 RIC8AQ9NPQ8 531 aa14.48□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 MRC2Q9UBG0 1479 aa14.48□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 INO80B-WBP1J3KQ70 363 aa14.48□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 INO80BQ9C086 356 aaPredicted RBP14.48□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 EYA2O00167 538 aa14.48□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 TUBB4BP68371 445 aa14.48□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 EYA1Q99502 592 aa14.48□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 SOS1Q07889 1333 aaPredicted RBP14.47□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 DISP3Q9P2K9 1392 aa14.47□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 GNGT2O14610 69 aa14.47□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 THAP12O43422 761 aa14.47□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 PARP10Q53GL7 1025 aa14.47□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 NUP58Q9BVL2 599 aa14.47□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 AP5M1Q9H0R1 490 aa14.47□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 RUFY4Q6ZNE9 571 aa14.47□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 C17orf53Q8N3J3 647 aaPredicted RBP14.47□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 NFE2L3Q9Y4A8 694 aa14.47□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 POC1B-GALNT4F8VUJ3 575 aa14.47□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 SGK1O00141 431 aa14.47□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 LMNB1P20700 586 aa14.47□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 MUM1Q2TAK8 710 aa14.47□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 SYNDIG1Q9H7V2 258 aa14.47□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 SUGT1Q9Y2Z0 365 aa14.47□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 PNOCQ13519 176 aa14.47□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 HDAC1Q13547 482 aaPredicted RBP14.47□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 KRT25Q7Z3Z0 450 aa14.47□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 PPWD1Q96BP3 646 aaKnown RBP14.47□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 PRPSAP1Q14558 356 aa14.47□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 CCDC38Q502W7 563 aa14.47□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 ARMCX5Q6P1M9 558 aa14.47□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 USP17L12C9JPN9 530 aa14.47□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 USP17L21D6R901 530 aa14.47□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 MARK3P27448 753 aa14.47□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 PHBP35232 272 aa14.47□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 ZNF148Q9UQR1 794 aa14.47□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 USH1CQ9Y6N9 552 aa14.47□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 TRIM14Q14142 442 aa14.46□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 ZNF467Q7Z7K2 595 aaPredicted RBP14.46□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.46□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 KRIT1O00522 736 aa14.46□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 COBLO75128 1261 aa14.46□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 ADCY1Q08828 1119 aa14.46□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 G2E3Q7L622 706 aa14.46□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 PANK4Q9NVE7 773 aa14.46□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 ZKSCAN5Q9Y2L8 839 aa14.46□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 PDE6CP51160 858 aa14.46□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 HABP4Q5JVS0 413 aaKnown RBP14.46□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 DNAAF3Q8N9W5 541 aa14.46□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 PLBD2Q8NHP8 589 aa14.46□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 DPH5Q9H2P9 285 aa14.46□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 PCDHB4Q9Y5E5 795 aa14.46□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 MAGI1Q96QZ7 1491 aaPredicted RBP14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms