RNA–Protein interactions for RNA: ENST00000471701.1

PRPF40A-207, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 293 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-207ENST00000471701 N4BP3O15049 544 aa5.98□□□□□ -1.45
PRPF40A-207ENST00000471701 EFEMP2O95967 443 aa5.98□□□□□ -1.45
PRPF40A-207ENST00000471701 TP53P04637 393 aaPredicted RBP5.98□□□□□ -1.45
PRPF40A-207ENST00000471701 ACRP10323 421 aa5.98□□□□□ -1.45
PRPF40A-207ENST00000471701 CTSKP43235 329 aa5.98□□□□□ -1.45
PRPF40A-207ENST00000471701 CTSWP56202 376 aa5.98□□□□□ -1.45
PRPF40A-207ENST00000471701 RAB3GAP1Q15042 981 aa5.98□□□□□ -1.45
PRPF40A-207ENST00000471701 LDLRAD1Q5T700 205 aa5.98□□□□□ -1.45
PRPF40A-207ENST00000471701 CRTC3Q6UUV7 619 aa5.98□□□□□ -1.45
PRPF40A-207ENST00000471701 JAMLQ86YT9 394 aa5.98□□□□□ -1.45
PRPF40A-207ENST00000471701 TAB3Q8N5C8 712 aaPredicted RBP5.98□□□□□ -1.45
PRPF40A-207ENST00000471701 ACSL6Q9UKU0 697 aa5.98□□□□□ -1.45
PRPF40A-207ENST00000471701 KIR3DS1Q14943 382 aa5.97□□□□□ -1.45
PRPF40A-207ENST00000471701 TCEAL1Q15170 157 aa5.97□□□□□ -1.45
PRPF40A-207ENST00000471701 ZNF394Q53GI3 561 aa5.97□□□□□ -1.45
PRPF40A-207ENST00000471701 TDRD10Q5VZ19 366 aaKnown RBP5.97□□□□□ -1.45
PRPF40A-207ENST00000471701 SLCO6A1Q86UG4 719 aa5.97□□□□□ -1.45
PRPF40A-207ENST00000471701 CNTD2Q9H8S5 307 aa5.97□□□□□ -1.45
PRPF40A-207ENST00000471701 PARD6AQ9NPB6 346 aa5.97□□□□□ -1.45
PRPF40A-207ENST00000471701 KLHL14Q9P2G3 628 aa5.97□□□□□ -1.45
PRPF40A-207ENST00000471701 PI3P19957 117 aa5.96□□□□□ -1.46
PRPF40A-207ENST00000471701 HOXA5P20719 270 aa5.96□□□□□ -1.46
PRPF40A-207ENST00000471701 GUCY2CP25092 1073 aa5.96□□□□□ -1.46
PRPF40A-207ENST00000471701 FANCCQ00597 558 aa5.96□□□□□ -1.46
PRPF40A-207ENST00000471701 SSPNQ14714 243 aa5.96□□□□□ -1.46
PRPF40A-207ENST00000471701 UNC5AQ6ZN44 842 aa5.96□□□□□ -1.46
PRPF40A-207ENST00000471701 TMEM52Q8NDY8 209 aa5.96□□□□□ -1.46
PRPF40A-207ENST00000471701 PANK1Q8TE04 598 aa5.96□□□□□ -1.46
PRPF40A-207ENST00000471701 MZB1Q8WU39 189 aa5.96□□□□□ -1.46
PRPF40A-207ENST00000471701 BRF1Q92994 677 aa5.96□□□□□ -1.46
PRPF40A-207ENST00000471701 SF3B6Q9Y3B4 125 aaKnown RBP5.96□□□□□ -1.46
PRPF40A-207ENST00000471701 PCDHGB7Q9Y5F8 929 aa5.96□□□□□ -1.46
PRPF40A-207ENST00000471701 NUDT19A8MXV4 375 aa5.95□□□□□ -1.46
PRPF40A-207ENST00000471701 B8ZZF3 427 aa5.95□□□□□ -1.46
PRPF40A-207ENST00000471701 SASH1O94885 1247 aa5.95□□□□□ -1.46
PRPF40A-207ENST00000471701 CD247P20963 164 aa5.95□□□□□ -1.46
PRPF40A-207ENST00000471701 AFF3P51826 1226 aaKnown RBP5.95□□□□□ -1.46
PRPF40A-207ENST00000471701 EPHB3P54753 998 aa5.95□□□□□ -1.46
PRPF40A-207ENST00000471701 ZNF445P59923 1031 aa5.95□□□□□ -1.46
PRPF40A-207ENST00000471701 POU4F1Q01851 419 aa5.95□□□□□ -1.46
PRPF40A-207ENST00000471701 COL9A2Q14055 689 aaPredicted RBP5.95□□□□□ -1.46
PRPF40A-207ENST00000471701 NR1I3Q14994 352 aa5.95□□□□□ -1.46
PRPF40A-207ENST00000471701 AXDND1Q5T1B0 1012 aaPredicted RBP5.95□□□□□ -1.46
PRPF40A-207ENST00000471701 DCAF15Q66K64 600 aa5.95□□□□□ -1.46
PRPF40A-207ENST00000471701 CNKSR3Q6P9H4 555 aa5.95□□□□□ -1.46
PRPF40A-207ENST00000471701 TMC6Q7Z403 805 aa5.95□□□□□ -1.46
PRPF40A-207ENST00000471701 LDHDQ86WU2 507 aa5.95□□□□□ -1.46
PRPF40A-207ENST00000471701 RBBP8NLQ8NC74 664 aaPredicted RBP5.95□□□□□ -1.46
PRPF40A-207ENST00000471701 JMJD8Q96S16 334 aa5.95□□□□□ -1.46
PRPF40A-207ENST00000471701 SLC12A9Q9BXP2 914 aa5.95□□□□□ -1.46
PRPF40A-207ENST00000471701 GP6Q9HCN6 339 aa5.95□□□□□ -1.46
PRPF40A-207ENST00000471701 IMPACTQ9P2X3 320 aa5.95□□□□□ -1.46
PRPF40A-207ENST00000471701 PPT2Q9UMR5 302 aa5.95□□□□□ -1.46
PRPF40A-207ENST00000471701 PRRG2O14669 202 aa5.94□□□□□ -1.46
PRPF40A-207ENST00000471701 TBC1D8O95759 1140 aa5.94□□□□□ -1.46
PRPF40A-207ENST00000471701 ITGA4P13612 1032 aa5.94□□□□□ -1.46
PRPF40A-207ENST00000471701 CBX2Q14781 532 aaPredicted RBP5.94□□□□□ -1.46
PRPF40A-207ENST00000471701 RTP2Q5QGT7 225 aa5.94□□□□□ -1.46
PRPF40A-207ENST00000471701 ZNF654Q8IZM8 581 aa5.94□□□□□ -1.46
PRPF40A-207ENST00000471701 MARCH10Q8NA82 808 aaPredicted RBP5.94□□□□□ -1.46
PRPF40A-207ENST00000471701 RELTQ969Z4 430 aa5.94□□□□□ -1.46
PRPF40A-207ENST00000471701 SPATA32Q96LK8 384 aa5.94□□□□□ -1.46
PRPF40A-207ENST00000471701 FAM86C1Q9NVL1 165 aa5.94□□□□□ -1.46
PRPF40A-207ENST00000471701 DDX41Q9UJV9 622 aaKnown RBP5.94□□□□□ -1.46
PRPF40A-207ENST00000471701 DIS3Q9Y2L1 958 aaKnown RBP5.94□□□□□ -1.46
PRPF40A-207ENST00000471701 FHOD1Q9Y613 1164 aa5.94□□□□□ -1.46
PRPF40A-207ENST00000471701 SLC12A7Q9Y666 1083 aa5.94□□□□□ -1.46
PRPF40A-207ENST00000471701 ADAMTS20P59510 1910 aa5.93□□□□□ -1.46
PRPF40A-207ENST00000471701 A0A087WZG4 1122 aa5.93□□□□□ -1.46
PRPF40A-207ENST00000471701 H0Y8X5 98 aa5.93□□□□□ -1.46
PRPF40A-207ENST00000471701 SCAMP3O14828 347 aaKnown RBP5.93□□□□□ -1.46
PRPF40A-207ENST00000471701 SHOXO15266 292 aa5.93□□□□□ -1.46
PRPF40A-207ENST00000471701 CDR1P51861 262 aa5.93□□□□□ -1.46
PRPF40A-207ENST00000471701 MFAP1P55081 439 aaKnown RBP5.93□□□□□ -1.46
PRPF40A-207ENST00000471701 RACK1P63244 317 aaKnown RBP5.93□□□□□ -1.46
PRPF40A-207ENST00000471701 CYP2R1Q6VVX0 501 aa5.93□□□□□ -1.46
PRPF40A-207ENST00000471701 RUFY4Q6ZNE9 571 aa5.93□□□□□ -1.46
PRPF40A-207ENST00000471701 FIBCD1Q8N539 461 aa5.93□□□□□ -1.46
PRPF40A-207ENST00000471701 DACT3Q96B18 629 aaPredicted RBP5.93□□□□□ -1.46
PRPF40A-207ENST00000471701 ZNF451Q9Y4E5 1061 aa5.93□□□□□ -1.46
PRPF40A-207ENST00000471701 BUB1BO60566 1050 aaPredicted RBP5.92□□□□□ -1.46
PRPF40A-207ENST00000471701 PFKLP17858 780 aa5.92□□□□□ -1.46
PRPF40A-207ENST00000471701 MVKQ03426 396 aa5.92□□□□□ -1.46
PRPF40A-207ENST00000471701 ZYXQ15942 572 aaKnown RBP5.92□□□□□ -1.46
PRPF40A-207ENST00000471701 GNPTABQ3T906 1256 aa5.92□□□□□ -1.46
PRPF40A-207ENST00000471701 ZC3H14Q6PJT7 736 aaKnown RBP5.92□□□□□ -1.46
PRPF40A-207ENST00000471701 PPFIBP1Q86W92 1011 aa5.92□□□□□ -1.46
PRPF40A-207ENST00000471701 NLGN1Q8N2Q7 840 aa5.92□□□□□ -1.46
PRPF40A-207ENST00000471701 FCRL3Q96P31 734 aaPredicted RBP5.92□□□□□ -1.46
PRPF40A-207ENST00000471701 KRTAP4-9Q9BYQ8 210 aa5.92□□□□□ -1.46
PRPF40A-207ENST00000471701 NOL6Q9H6R4 1146 aaKnown RBP5.92□□□□□ -1.46
PRPF40A-207ENST00000471701 TNFRSF12AQ9NP84 129 aa5.92□□□□□ -1.46
PRPF40A-207ENST00000471701 ZNF214Q9UL59 606 aaPredicted RBP5.92□□□□□ -1.46
PRPF40A-207ENST00000471701 KRTAP9-7A8MTY7 169 aa5.91□□□□□ -1.46
PRPF40A-207ENST00000471701 FGF10O15520 208 aaPredicted RBP5.91□□□□□ -1.46
PRPF40A-207ENST00000471701 MAPKAPK2P49137 400 aa5.91□□□□□ -1.46
PRPF40A-207ENST00000471701 EIF6P56537 245 aaKnown RBP5.91□□□□□ -1.46
PRPF40A-207ENST00000471701 PPP2R5DQ14738 602 aa5.91□□□□□ -1.46
PRPF40A-207ENST00000471701 BICRALQ6AI39 1079 aa5.91□□□□□ -1.46
PRPF40A-207ENST00000471701 PAQR3Q6TCH7 311 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms