RNA–Protein interactions for RNA: ENST00000471226.5

ABCF3-208, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 5

Gene ABCF3, Length 650 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-208ENST00000471226 BAZ2BQ9UIF8 2168 aaKnown RBP17.74■□□□□ 0.43
ABCF3-208ENST00000471226 BRCA2P51587 3418 aa17.74■□□□□ 0.43
ABCF3-208ENST00000471226 MYCP01106 439 aaPredicted RBP17.74■□□□□ 0.43
ABCF3-208ENST00000471226 PARP1P09874 1014 aaKnown RBP17.74■□□□□ 0.43
ABCF3-208ENST00000471226 ZKSCAN1P17029 563 aaPredicted RBP17.74■□□□□ 0.43
ABCF3-208ENST00000471226 TRIM32Q13049 653 aa17.74■□□□□ 0.43
ABCF3-208ENST00000471226 TKFCQ3LXA3 575 aa17.74■□□□□ 0.43
ABCF3-208ENST00000471226 DPP9Q86TI2 863 aa17.74■□□□□ 0.43
ABCF3-208ENST00000471226 TMEM87BQ96K49 555 aa17.74■□□□□ 0.43
ABCF3-208ENST00000471226 NEK1Q96PY6 1258 aa17.74■□□□□ 0.43
ABCF3-208ENST00000471226 LY9Q9HBG7 655 aa17.74■□□□□ 0.43
ABCF3-208ENST00000471226 FLRT1Q9NZU1 646 aa17.74■□□□□ 0.43
ABCF3-208ENST00000471226 FBXO40Q9UH90 709 aa17.74■□□□□ 0.43
ABCF3-208ENST00000471226 SH2B2O14492 632 aaPredicted RBP17.73■□□□□ 0.43
ABCF3-208ENST00000471226 ICAM1P05362 532 aa17.73■□□□□ 0.43
ABCF3-208ENST00000471226 SLC4A3P48751 1232 aa17.73■□□□□ 0.43
ABCF3-208ENST00000471226 TROAPQ12815 778 aa17.73■□□□□ 0.43
ABCF3-208ENST00000471226 KRT32Q14532 448 aa17.73■□□□□ 0.43
ABCF3-208ENST00000471226 KCTD2Q14681 263 aa17.73■□□□□ 0.43
ABCF3-208ENST00000471226 ADCK5Q3MIX3 580 aa17.73■□□□□ 0.43
ABCF3-208ENST00000471226 CCDC174Q6PII3 467 aa17.73■□□□□ 0.43
ABCF3-208ENST00000471226 UBA5Q9GZZ9 404 aa17.73■□□□□ 0.43
ABCF3-208ENST00000471226 UNC93B1Q9H1C4 597 aa17.73■□□□□ 0.43
ABCF3-208ENST00000471226 CPVLQ9H3G5 476 aa17.73■□□□□ 0.43
ABCF3-208ENST00000471226 GPHNQ9NQX3 736 aaPredicted RBP17.73■□□□□ 0.43
ABCF3-208ENST00000471226 SLC5A4Q9NY91 659 aa17.73■□□□□ 0.43
ABCF3-208ENST00000471226 MAD2L2Q9UI95 211 aa17.73■□□□□ 0.43
ABCF3-208ENST00000471226 DIS3Q9Y2L1 958 aaKnown RBP17.73■□□□□ 0.43
ABCF3-208ENST00000471226 RPTORQ8N122 1335 aa17.72■□□□□ 0.43
ABCF3-208ENST00000471226 MCM3APO60318 1980 aa17.72■□□□□ 0.43
ABCF3-208ENST00000471226 DNAJC25-GNG10A0A024R161 153 aa17.72■□□□□ 0.43
ABCF3-208ENST00000471226 PALM3A6NDB9 673 aaPredicted RBP17.72■□□□□ 0.43
ABCF3-208ENST00000471226 GJB1P08034 283 aa17.72■□□□□ 0.43
ABCF3-208ENST00000471226 EXOSC10Q01780 885 aaKnown RBP17.72■□□□□ 0.43
ABCF3-208ENST00000471226 GRM4Q14833 912 aa17.72■□□□□ 0.43
ABCF3-208ENST00000471226 ZNF792Q3KQV3 632 aa17.72■□□□□ 0.43
ABCF3-208ENST00000471226 OLFML2BQ68BL8 750 aa17.72■□□□□ 0.43
ABCF3-208ENST00000471226 TMTC2Q8N394 836 aa17.72■□□□□ 0.43
ABCF3-208ENST00000471226 STAG2Q8N3U4 1231 aa17.72■□□□□ 0.43
ABCF3-208ENST00000471226 RNF208Q9H0X6 261 aa17.72■□□□□ 0.43
ABCF3-208ENST00000471226 PAK6Q9NQU5 681 aaPredicted RBP17.72■□□□□ 0.43
ABCF3-208ENST00000471226 RNF146Q9NTX7 359 aa17.72■□□□□ 0.43
ABCF3-208ENST00000471226 SNX14Q9Y5W7 946 aa17.72■□□□□ 0.43
ABCF3-208ENST00000471226 LCTP09848 1927 aa17.72■□□□□ 0.43
ABCF3-208ENST00000471226 WDR19Q8NEZ3 1342 aa17.72■□□□□ 0.43
ABCF3-208ENST00000471226 FRMPD3Q5JV73 1810 aa17.71■□□□□ 0.43
ABCF3-208ENST00000471226 PGK2P07205 417 aa17.71■□□□□ 0.43
ABCF3-208ENST00000471226 ALAS1P13196 640 aa17.71■□□□□ 0.43
ABCF3-208ENST00000471226 LIFRP42702 1097 aa17.71■□□□□ 0.43
ABCF3-208ENST00000471226 CACNB2Q08289 660 aaPredicted RBP17.71■□□□□ 0.43
ABCF3-208ENST00000471226 ADGRF4Q8IZF3 695 aa17.71■□□□□ 0.43
ABCF3-208ENST00000471226 MAML3Q96JK9 1138 aa17.71■□□□□ 0.43
ABCF3-208ENST00000471226 TRERF1Q96PN7 1200 aa17.71■□□□□ 0.43
ABCF3-208ENST00000471226 USP26Q9BXU7 913 aa17.71■□□□□ 0.43
ABCF3-208ENST00000471226 ACAD9Q9H845 621 aa17.71■□□□□ 0.43
ABCF3-208ENST00000471226 HMX1Q9NP08 348 aaPredicted RBP17.71■□□□□ 0.43
ABCF3-208ENST00000471226 PNMA2Q9UL42 364 aa17.71■□□□□ 0.43
ABCF3-208ENST00000471226 CCPG1Q9ULG6 757 aa17.71■□□□□ 0.43
ABCF3-208ENST00000471226 PRKAR2AP13861 404 aaKnown RBP17.7■□□□□ 0.42
ABCF3-208ENST00000471226 MUM1L1Q5H9M0 696 aa17.7■□□□□ 0.42
ABCF3-208ENST00000471226 MFSD14CQ5VZR4 134 aa17.7■□□□□ 0.42
ABCF3-208ENST00000471226 DHX32Q7L7V1 743 aaKnown RBP17.7■□□□□ 0.42
ABCF3-208ENST00000471226 CATIPQ7Z7H3 387 aa17.7■□□□□ 0.42
ABCF3-208ENST00000471226 ZNF654Q8IZM8 581 aa17.7■□□□□ 0.42
ABCF3-208ENST00000471226 ANKRD35Q8N283 1001 aa17.7■□□□□ 0.42
ABCF3-208ENST00000471226 DDX11Q96FC9 970 aa17.7■□□□□ 0.42
ABCF3-208ENST00000471226 MAP3K14Q99558 947 aa17.7■□□□□ 0.42
ABCF3-208ENST00000471226 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.7■□□□□ 0.429e-6■■■■■ 32.4
ABCF3-208ENST00000471226 JMJD4Q9H9V9 463 aa17.7■□□□□ 0.42
ABCF3-208ENST00000471226 HOMER2Q9NSB8 354 aa17.7■□□□□ 0.42
ABCF3-208ENST00000471226 KLRF2D3W0D1 207 aa17.69■□□□□ 0.42
ABCF3-208ENST00000471226 DDAH1O94760 285 aa17.69■□□□□ 0.42
ABCF3-208ENST00000471226 HMGB1P09429 215 aaKnown RBP17.69■□□□□ 0.42
ABCF3-208ENST00000471226 EN2P19622 333 aaPredicted RBP17.69■□□□□ 0.42
ABCF3-208ENST00000471226 CYP2C19P33261 490 aa17.69■□□□□ 0.42
ABCF3-208ENST00000471226 GJA8P48165 433 aa17.69■□□□□ 0.42
ABCF3-208ENST00000471226 SGMS1Q86VZ5 419 aa17.69■□□□□ 0.42
ABCF3-208ENST00000471226 MTMR8Q96EF0 704 aa17.69■□□□□ 0.42
ABCF3-208ENST00000471226 LRRC2Q9BYS8 371 aa17.69■□□□□ 0.42
ABCF3-208ENST00000471226 A1CFQ9NQ94 594 aaKnown RBP17.69■□□□□ 0.42
ABCF3-208ENST00000471226 CCDC69A6NI79 296 aa17.68■□□□□ 0.42
ABCF3-208ENST00000471226 SGPL1O95470 568 aa17.68■□□□□ 0.42
ABCF3-208ENST00000471226 TAL1P17542 331 aaPredicted RBP17.68■□□□□ 0.42
ABCF3-208ENST00000471226 CAPN2P17655 700 aa17.68■□□□□ 0.42
ABCF3-208ENST00000471226 CDC37Q16543 378 aaPredicted RBP17.68■□□□□ 0.42
ABCF3-208ENST00000471226 SLC35G1Q2M3R5 365 aa17.68■□□□□ 0.42
ABCF3-208ENST00000471226 U2AF1L4Q8WU68 220 aaKnown RBP17.68■□□□□ 0.42
ABCF3-208ENST00000471226 SHISA4Q96DD7 197 aa17.68■□□□□ 0.42
ABCF3-208ENST00000471226 RIOX1Q9H6W3 641 aa17.68■□□□□ 0.42
ABCF3-208ENST00000471226 CYBAP13498 195 aa17.67■□□□□ 0.42
ABCF3-208ENST00000471226 CCND3P30281 292 aaPredicted RBP17.67■□□□□ 0.42
ABCF3-208ENST00000471226 QRICH1Q2TAL8 776 aa17.67■□□□□ 0.42
ABCF3-208ENST00000471226 MAMDC4Q6UXC1 1216 aa17.67■□□□□ 0.42
ABCF3-208ENST00000471226 NFXL1Q6ZNB6 911 aa17.67■□□□□ 0.42
ABCF3-208ENST00000471226 ZNF467Q7Z7K2 595 aaPredicted RBP17.67■□□□□ 0.42
ABCF3-208ENST00000471226 MSL3Q8N5Y2 521 aaKnown RBP17.67■□□□□ 0.42
ABCF3-208ENST00000471226 FAM133AQ8N9E0 248 aa17.67■□□□□ 0.42
ABCF3-208ENST00000471226 CLEC4DQ8WXI8 215 aa17.67■□□□□ 0.42
ABCF3-208ENST00000471226 FGD4Q96M96 766 aa17.67■□□□□ 0.42
ABCF3-208ENST00000471226 TCEANC2Q96MN5 208 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms