RNA–Protein interactions for RNA: ENST00000470994.1

GPNMB-208, Transcript of glycoprotein nmb, humanhuman

TSL 2

Gene GPNMB, Length 538 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-208ENST00000470994 ABL1P00519 1130 aa7.83□□□□□ -1.16
GPNMB-208ENST00000470994 ITIH2P19823 946 aa7.83□□□□□ -1.16
GPNMB-208ENST00000470994 KIF4BQ2VIQ3 1234 aa7.83□□□□□ -1.16
GPNMB-208ENST00000470994 KRTAP4-11Q9BYQ6 195 aa7.83□□□□□ -1.16
GPNMB-208ENST00000470994 SSU72Q9NP77 194 aaKnown RBP7.83□□□□□ -1.16
GPNMB-208ENST00000470994 ATP10DQ9P241 1426 aa7.83□□□□□ -1.16
GPNMB-208ENST00000470994 USP54Q70EL1 1684 aa7.83□□□□□ -1.16
GPNMB-208ENST00000470994 CLSPNQ9HAW4 1339 aa7.82□□□□□ -1.16
GPNMB-208ENST00000470994 DPEP1P16444 411 aa7.82□□□□□ -1.16
GPNMB-208ENST00000470994 IKZF1Q13422 519 aa7.82□□□□□ -1.16
GPNMB-208ENST00000470994 TTLL4Q14679 1199 aa7.82□□□□□ -1.16
GPNMB-208ENST00000470994 DISC1Q9NRI5 854 aa7.82□□□□□ -1.16
GPNMB-208ENST00000470994 BRPF3Q9ULD4 1205 aa7.82□□□□□ -1.16
GPNMB-208ENST00000470994 CPNE3O75131 537 aaKnown RBP7.81□□□□□ -1.16
GPNMB-208ENST00000470994 LEFTY1O75610 366 aa7.81□□□□□ -1.16
GPNMB-208ENST00000470994 HMOX1P09601 288 aa7.81□□□□□ -1.16
GPNMB-208ENST00000470994 GYS1P13807 737 aa7.81□□□□□ -1.16
GPNMB-208ENST00000470994 HCLS1P14317 486 aaPredicted RBP7.81□□□□□ -1.16
GPNMB-208ENST00000470994 CRKLP46109 303 aaKnown RBP7.81□□□□□ -1.16
GPNMB-208ENST00000470994 TGFB2P61812 414 aa7.81□□□□□ -1.16
GPNMB-208ENST00000470994 PRPF40BQ6NWY9 871 aaKnown RBP7.81□□□□□ -1.16
GPNMB-208ENST00000470994 WDR89Q96FK6 387 aaPredicted RBP7.81□□□□□ -1.16
GPNMB-208ENST00000470994 ZC3H12CQ9C0D7 883 aaKnown RBP7.81□□□□□ -1.16
GPNMB-208ENST00000470994 TNKS2Q9H2K2 1166 aa7.81□□□□□ -1.16
GPNMB-208ENST00000470994 SRP68Q9UHB9 627 aaKnown RBP7.81□□□□□ -1.16
GPNMB-208ENST00000470994 GTF2IRD1Q9UHL9 959 aa7.81□□□□□ -1.16
GPNMB-208ENST00000470994 FAM208AQ9UK61 1670 aaKnown RBP7.81□□□□□ -1.16
GPNMB-208ENST00000470994 GSTP1P09211 210 aaKnown RBP7.8□□□□□ -1.16
GPNMB-208ENST00000470994 IL13P35225 146 aa7.8□□□□□ -1.16
GPNMB-208ENST00000470994 AFMP43652 599 aa7.8□□□□□ -1.16
GPNMB-208ENST00000470994 ZP2Q05996 745 aa7.8□□□□□ -1.16
GPNMB-208ENST00000470994 PPP2R3AQ06190 1150 aa7.8□□□□□ -1.16
GPNMB-208ENST00000470994 CC2D1BQ5T0F9 858 aaKnown RBP7.8□□□□□ -1.16
GPNMB-208ENST00000470994 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.8□□□□□ -1.16
GPNMB-208ENST00000470994 DNAJC10Q8IXB1 793 aa7.8□□□□□ -1.16
GPNMB-208ENST00000470994 TOP6BLQ8N6T0 577 aa7.8□□□□□ -1.16
GPNMB-208ENST00000470994 NPHS2Q9NP85 383 aa7.8□□□□□ -1.16
GPNMB-208ENST00000470994 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.8□□□□□ -1.16
GPNMB-208ENST00000470994 PLAGL2Q9UPG8 496 aa7.8□□□□□ -1.16
GPNMB-208ENST00000470994 U3KQE9 123 aa7.8□□□□□ -1.16
GPNMB-208ENST00000470994 CNTNAP4Q9C0A0 1308 aa7.79□□□□□ -1.16
GPNMB-208ENST00000470994 DOT1LQ8TEK3 1739 aa7.79□□□□□ -1.16
GPNMB-208ENST00000470994 ZNF503-AS2A6NEH8 195 aa7.79□□□□□ -1.16
GPNMB-208ENST00000470994 ZNF862O60290 1169 aa7.79□□□□□ -1.16
GPNMB-208ENST00000470994 HSPA6P17066 643 aa7.79□□□□□ -1.16
GPNMB-208ENST00000470994 SLC39A6Q13433 755 aa7.79□□□□□ -1.16
GPNMB-208ENST00000470994 DALRD3Q5D0E6 543 aaKnown RBP7.79□□□□□ -1.16
GPNMB-208ENST00000470994 USPL1Q5W0Q7 1092 aa7.79□□□□□ -1.16
GPNMB-208ENST00000470994 SIAH1Q8IUQ4 282 aa7.79□□□□□ -1.16
GPNMB-208ENST00000470994 LRRC56Q8IYG6 542 aaPredicted RBP7.79□□□□□ -1.16
GPNMB-208ENST00000470994 ABCB6Q9NP58 842 aa7.79□□□□□ -1.16
GPNMB-208ENST00000470994 RNMTO43148 476 aaKnown RBP7.78□□□□□ -1.16
GPNMB-208ENST00000470994 GADD45BO75293 160 aaPredicted RBP7.78□□□□□ -1.16
GPNMB-208ENST00000470994 CHRNA5P30532 468 aa7.78□□□□□ -1.16
GPNMB-208ENST00000470994 ZNF211Q13398 564 aaPredicted RBP7.78□□□□□ -1.16
GPNMB-208ENST00000470994 C9orf131Q5VYM1 1079 aa7.78□□□□□ -1.16
GPNMB-208ENST00000470994 LILRA6Q6PI73 481 aa7.78□□□□□ -1.16
GPNMB-208ENST00000470994 MPZL3Q6UWV2 235 aa7.78□□□□□ -1.16
GPNMB-208ENST00000470994 C16orf71Q8IYS4 520 aaPredicted RBP7.78□□□□□ -1.16
GPNMB-208ENST00000470994 PCDHGC5Q9Y5F6 944 aa7.78□□□□□ -1.16
GPNMB-208ENST00000470994 NCAPD2Q15021 1401 aa7.78□□□□□ -1.16
GPNMB-208ENST00000470994 RGPD2P0DJD1 1756 aa7.77□□□□□ -1.17
GPNMB-208ENST00000470994 TMEM238LA0A1B0GVL6 79 aa7.77□□□□□ -1.17
GPNMB-208ENST00000470994 TMEM88BA6NKF7 163 aa7.77□□□□□ -1.17
GPNMB-208ENST00000470994 U2SURPO15042 1029 aaKnown RBP7.77□□□□□ -1.17
GPNMB-208ENST00000470994 NDUFB5O43674 189 aa7.77□□□□□ -1.17
GPNMB-208ENST00000470994 DIAPH1O60610 1272 aaKnown RBP7.77□□□□□ -1.17
GPNMB-208ENST00000470994 CANXP27824 592 aaKnown RBP7.77□□□□□ -1.17
GPNMB-208ENST00000470994 CFPP27918 469 aa7.77□□□□□ -1.17
GPNMB-208ENST00000470994 DDR1Q08345 913 aa7.77□□□□□ -1.17
GPNMB-208ENST00000470994 SLC52A2Q9HAB3 445 aa7.77□□□□□ -1.17
GPNMB-208ENST00000470994 ANO2Q9NQ90 1003 aa7.77□□□□□ -1.17
GPNMB-208ENST00000470994 PRDM7Q9NQW5 492 aa7.77□□□□□ -1.17
GPNMB-208ENST00000470994 CTNND2Q9UQB3 1225 aa7.77□□□□□ -1.17
GPNMB-208ENST00000470994 KDRP35968 1356 aa7.76□□□□□ -1.17
GPNMB-208ENST00000470994 IGF2BP3O00425 579 aaKnown RBP eCLIP7.76□□□□□ -1.17
GPNMB-208ENST00000470994 ZNF865P0CJ78 1059 aaPredicted RBP7.76□□□□□ -1.17
GPNMB-208ENST00000470994 ZNF157P51786 506 aaPredicted RBP7.76□□□□□ -1.17
GPNMB-208ENST00000470994 MTHFSDQ2M296 383 aaKnown RBP7.76□□□□□ -1.17
GPNMB-208ENST00000470994 SYDE1Q6ZW31 735 aaPredicted RBP7.76□□□□□ -1.17
GPNMB-208ENST00000470994 TTC5Q8N0Z6 440 aa7.76□□□□□ -1.17
GPNMB-208ENST00000470994 KCNB2Q92953 911 aa7.76□□□□□ -1.17
GPNMB-208ENST00000470994 ISL2Q96A47 359 aa7.76□□□□□ -1.17
GPNMB-208ENST00000470994 LIN37Q96GY3 246 aaPredicted RBP7.76□□□□□ -1.17
GPNMB-208ENST00000470994 NMRK2Q9NPI5 230 aa7.76□□□□□ -1.17
GPNMB-208ENST00000470994 RNF181Q9P0P0 153 aa7.76□□□□□ -1.17
GPNMB-208ENST00000470994 EGFL7Q9UHF1 273 aa7.76□□□□□ -1.17
GPNMB-208ENST00000470994 KDM6AO15550 1401 aaPredicted RBP7.76□□□□□ -1.17
GPNMB-208ENST00000470994 KIF7Q2M1P5 1343 aa7.76□□□□□ -1.17
GPNMB-208ENST00000470994 USP42Q9H9J4 1324 aaKnown RBP7.76□□□□□ -1.17
GPNMB-208ENST00000470994 C4BP0C0L5 1744 aa7.75□□□□□ -1.17
GPNMB-208ENST00000470994 GNAT3A8MTJ3 354 aa7.75□□□□□ -1.17
GPNMB-208ENST00000470994 TOMM70O94826 608 aa7.75□□□□□ -1.17
GPNMB-208ENST00000470994 GLI1P08151 1106 aa7.75□□□□□ -1.17
GPNMB-208ENST00000470994 CYP19A1P11511 503 aaPredicted RBP7.75□□□□□ -1.17
GPNMB-208ENST00000470994 KCNA3P22001 575 aa7.75□□□□□ -1.17
GPNMB-208ENST00000470994 CLCN7P51798 805 aa7.75□□□□□ -1.17
GPNMB-208ENST00000470994 NPM2Q86SE8 214 aaKnown RBP7.75□□□□□ -1.17
GPNMB-208ENST00000470994 CILP2Q8IUL8 1156 aa7.75□□□□□ -1.17
GPNMB-208ENST00000470994 RNF214Q8ND24 703 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms