RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 A0A0G2JLL6 359 aaPredicted RBP11.2□□□□□ -0.62
CCM2-204ENST00000470837 CCDC194A0A1B0GVG4 234 aa11.2□□□□□ -0.62
CCM2-204ENST00000470837 BAG4O95429 457 aaKnown RBP11.2□□□□□ -0.62
CCM2-204ENST00000470837 ITGBL1O95965 494 aaPredicted RBP11.2□□□□□ -0.62
CCM2-204ENST00000470837 CETPP11597 493 aa11.2□□□□□ -0.62
CCM2-204ENST00000470837 OSBPP22059 807 aa11.2□□□□□ -0.62
CCM2-204ENST00000470837 YY1P25490 414 aa11.2□□□□□ -0.62
CCM2-204ENST00000470837 GTF2A2P52657 109 aa11.2□□□□□ -0.62
CCM2-204ENST00000470837 HUNKP57058 714 aa11.2□□□□□ -0.62
CCM2-204ENST00000470837 FMR1Q06787 632 aaKnown RBP eCLIP11.2□□□□□ -0.62
CCM2-204ENST00000470837 RESTQ13127 1097 aa11.2□□□□□ -0.62
CCM2-204ENST00000470837 COG2Q14746 738 aa11.2□□□□□ -0.62
CCM2-204ENST00000470837 USH1GQ495M9 461 aa11.2□□□□□ -0.62
CCM2-204ENST00000470837 CCDC174Q6PII3 467 aa11.2□□□□□ -0.62
CCM2-204ENST00000470837 PRRT2Q7Z6L0 340 aaPredicted RBP11.2□□□□□ -0.62
CCM2-204ENST00000470837 NOSTRINQ8IVI9 506 aa11.2□□□□□ -0.62
CCM2-204ENST00000470837 BLIDQ8IZY5 108 aa11.2□□□□□ -0.62
CCM2-204ENST00000470837 MTMR8Q96EF0 704 aa11.2□□□□□ -0.62
CCM2-204ENST00000470837 GJB4Q9NTQ9 266 aa11.2□□□□□ -0.62
CCM2-204ENST00000470837 PPP1R9AQ9ULJ8 1098 aa11.2□□□□□ -0.62
CCM2-204ENST00000470837 PCDHA4Q9UN74 947 aa11.2□□□□□ -0.62
CCM2-204ENST00000470837 KCNH4Q9UQ05 1017 aa11.2□□□□□ -0.62
CCM2-204ENST00000470837 MRPL11Q9Y3B7 192 aaKnown RBP11.2□□□□□ -0.62
CCM2-204ENST00000470837 ESYT2A0FGR8 921 aa11.19□□□□□ -0.62
CCM2-204ENST00000470837 BTBD18B2RXH4 712 aa11.19□□□□□ -0.62
CCM2-204ENST00000470837 TOMM70O94826 608 aa11.19□□□□□ -0.62
CCM2-204ENST00000470837 U2AF2P26368 475 aaKnown RBP eCLIP11.19□□□□□ -0.62
CCM2-204ENST00000470837 SLC35G1Q2M3R5 365 aa11.19□□□□□ -0.62
CCM2-204ENST00000470837 MCTP2Q6DN12 878 aa11.19□□□□□ -0.62
CCM2-204ENST00000470837 CATSPERGQ6ZRH7 1159 aa11.19□□□□□ -0.62
CCM2-204ENST00000470837 REXO1Q8N1G1 1221 aaKnown RBP11.19□□□□□ -0.62
CCM2-204ENST00000470837 CNKSR2Q8WXI2 1034 aa11.19□□□□□ -0.62
CCM2-204ENST00000470837 COA7Q96BR5 231 aa11.19□□□□□ -0.62
CCM2-204ENST00000470837 SCAND2PQ9GZW5 306 aaPredicted RBP11.19□□□□□ -0.62
CCM2-204ENST00000470837 ZMYND12Q9H0C1 365 aa11.19□□□□□ -0.62
CCM2-204ENST00000470837 RANBP17Q9H2T7 1088 aaKnown RBP11.19□□□□□ -0.62
CCM2-204ENST00000470837 PSTPIP2Q9H939 334 aa11.19□□□□□ -0.62
CCM2-204ENST00000470837 FBXO28Q9NVF7 368 aa11.19□□□□□ -0.62
CCM2-204ENST00000470837 PNMA3Q9UL41 463 aa11.19□□□□□ -0.62
CCM2-204ENST00000470837 CCPG1Q9ULG6 757 aa11.19□□□□□ -0.62
CCM2-204ENST00000470837 ABT1Q9ULW3 272 aaKnown RBP11.19□□□□□ -0.62
CCM2-204ENST00000470837 DOCK1Q14185 1865 aa11.19□□□□□ -0.62
CCM2-204ENST00000470837 PAPPA2Q9BXP8 1791 aa11.18□□□□□ -0.62
CCM2-204ENST00000470837 ABCB11O95342 1321 aa11.18□□□□□ -0.62
CCM2-204ENST00000470837 MYPNQ86TC9 1320 aa11.18□□□□□ -0.62
CCM2-204ENST00000470837 GOLGA6L4A6NEF3 574 aa11.18□□□□□ -0.62
CCM2-204ENST00000470837 KIF3CO14782 793 aa11.18□□□□□ -0.62
CCM2-204ENST00000470837 ICAM1P05362 532 aa11.18□□□□□ -0.62
CCM2-204ENST00000470837 ZBTB48P10074 688 aaPredicted RBP11.18□□□□□ -0.62
CCM2-204ENST00000470837 DSG3P32926 999 aa11.18□□□□□ -0.62
CCM2-204ENST00000470837 ZNF157P51786 506 aaPredicted RBP11.18□□□□□ -0.62
CCM2-204ENST00000470837 SNAP25P60880 206 aa11.18□□□□□ -0.62
CCM2-204ENST00000470837 DNM1Q05193 864 aaKnown RBP11.18□□□□□ -0.62
CCM2-204ENST00000470837 SF3A1Q15459 793 aaKnown RBP11.18□□□□□ -0.62
CCM2-204ENST00000470837 RILPL1Q5EBL4 403 aa11.18□□□□□ -0.62
CCM2-204ENST00000470837 CLEC17AQ6ZS10 378 aa11.18□□□□□ -0.62
CCM2-204ENST00000470837 KRT25Q7Z3Z0 450 aa11.18□□□□□ -0.62
CCM2-204ENST00000470837 MCF2L2Q86YR7 1114 aa11.18□□□□□ -0.62
CCM2-204ENST00000470837 TEX2Q8IWB9 1127 aa11.18□□□□□ -0.62
CCM2-204ENST00000470837 MB21D1Q8N884 522 aa11.18□□□□□ -0.62
CCM2-204ENST00000470837 DAGLBQ8NCG7 672 aa11.18□□□□□ -0.62
CCM2-204ENST00000470837 WNK4Q96J92 1243 aa11.18□□□□□ -0.62
CCM2-204ENST00000470837 SPATA32Q96LK8 384 aa11.18□□□□□ -0.62
CCM2-204ENST00000470837 CEP131Q9UPN4 1083 aa11.18□□□□□ -0.62
CCM2-204ENST00000470837 AGTPBP1Q9UPW5 1226 aa11.18□□□□□ -0.62
CCM2-204ENST00000470837 MYH4Q9Y623 1939 aa11.17□□□□□ -0.62
CCM2-204ENST00000470837 VWA5AO00534 786 aa11.17□□□□□ -0.62
CCM2-204ENST00000470837 FIBPO43427 364 aa11.17□□□□□ -0.62
CCM2-204ENST00000470837 MCM4P33991 863 aa11.17□□□□□ -0.62
CCM2-204ENST00000470837 OAZ1P54368 228 aa11.17□□□□□ -0.62
CCM2-204ENST00000470837 FSTL1Q12841 308 aa11.17□□□□□ -0.62
CCM2-204ENST00000470837 MKRN3Q13064 507 aaKnown RBP11.17□□□□□ -0.62
CCM2-204ENST00000470837 NR5A1Q13285 461 aa11.17□□□□□ -0.62
CCM2-204ENST00000470837 DGKZQ13574 1117 aa11.17□□□□□ -0.62
CCM2-204ENST00000470837 PLS1Q14651 629 aa11.17□□□□□ -0.62
CCM2-204ENST00000470837 NONOQ15233 471 aaKnown RBP eCLIP11.17□□□□□ -0.62
CCM2-204ENST00000470837 MYSM1Q5VVJ2 828 aa11.17□□□□□ -0.62
CCM2-204ENST00000470837 CST9Q5W186 159 aa11.17□□□□□ -0.62
CCM2-204ENST00000470837 PIK3AP1Q6ZUJ8 805 aa11.17□□□□□ -0.62
CCM2-204ENST00000470837 CPXCR1Q8N123 301 aa11.17□□□□□ -0.62
CCM2-204ENST00000470837 JMYQ8N9B5 988 aa11.17□□□□□ -0.62
CCM2-204ENST00000470837 GTF3C2Q8WUA4 911 aaPredicted RBP11.17□□□□□ -0.62
CCM2-204ENST00000470837 EHMT1Q9H9B1 1298 aa11.17□□□□□ -0.62
CCM2-204ENST00000470837 SLC38A10Q9HBR0 1119 aa11.17□□□□□ -0.62
CCM2-204ENST00000470837 RIC8AQ9NPQ8 531 aa11.17□□□□□ -0.62
CCM2-204ENST00000470837 CCL15-CCL14A0A0B4J2E2 113 aa11.16□□□□□ -0.62
CCM2-204ENST00000470837 TMEM88BA6NKF7 163 aa11.16□□□□□ -0.62
CCM2-204ENST00000470837 SPDYE3A6NKU9 549 aa11.16□□□□□ -0.62
CCM2-204ENST00000470837 KIF28PB7ZC32 967 aa11.16□□□□□ -0.62
CCM2-204ENST00000470837 GCOM1H8Y6P7 765 aaPredicted RBP11.16□□□□□ -0.62
CCM2-204ENST00000470837 PPP1R11O60927 126 aaPredicted RBP11.16□□□□□ -0.62
CCM2-204ENST00000470837 BMP15O95972 392 aa11.16□□□□□ -0.62
CCM2-204ENST00000470837 POLR2MP0CAP2 368 aa11.16□□□□□ -0.62
CCM2-204ENST00000470837 ALAS1P13196 640 aa11.16□□□□□ -0.62
CCM2-204ENST00000470837 ATP2B1P20020 1258 aa11.16□□□□□ -0.62
CCM2-204ENST00000470837 HOXA7P31268 230 aaPredicted RBP11.16□□□□□ -0.62
CCM2-204ENST00000470837 TRAPPC10P48553 1259 aa11.16□□□□□ -0.62
CCM2-204ENST00000470837 CEBPZQ03701 1054 aaKnown RBP11.16□□□□□ -0.62
CCM2-204ENST00000470837 STK38Q15208 465 aa11.16□□□□□ -0.62
CCM2-204ENST00000470837 NFKBIBQ15653 356 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms