RNA–Protein interactions for RNA: ENST00000470799.5

COL16A1-209, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 826 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-209ENST00000470799 DSCC1Q9BVC3 393 aa18.78■□□□□ 0.6
COL16A1-209ENST00000470799 GPCPD1Q9NPB8 672 aa18.78■□□□□ 0.6
COL16A1-209ENST00000470799 FRMPD2Q68DX3 1309 aaPredicted RBP18.77■□□□□ 0.6
COL16A1-209ENST00000470799 MYH4Q9Y623 1939 aa18.77■□□□□ 0.6
COL16A1-209ENST00000470799 KBTBD13C9JR72 458 aa18.77■□□□□ 0.6
COL16A1-209ENST00000470799 IGHA2P01877 340 aa18.77■□□□□ 0.6
COL16A1-209ENST00000470799 ALAS1P13196 640 aa18.77■□□□□ 0.6
COL16A1-209ENST00000470799 GJC2Q5T442 439 aaPredicted RBP18.77■□□□□ 0.6
COL16A1-209ENST00000470799 RASGRP2Q7LDG7 609 aa18.77■□□□□ 0.6
COL16A1-209ENST00000470799 IQCA1Q86XH1 822 aa18.77■□□□□ 0.6
COL16A1-209ENST00000470799 TTC14Q96N46 770 aa18.77■□□□□ 0.6
COL16A1-209ENST00000470799 IPO9Q96P70 1041 aaKnown RBP18.77■□□□□ 0.6
COL16A1-209ENST00000470799 ZKSCAN3Q9BRR0 538 aa18.77■□□□□ 0.6
COL16A1-209ENST00000470799 ACAD9Q9H845 621 aa18.77■□□□□ 0.6
COL16A1-209ENST00000470799 PRR12Q9ULL5 1215 aa18.77■□□□□ 0.6
COL16A1-209ENST00000470799 ZMYND8Q9ULU4 1186 aaPredicted RBP18.77■□□□□ 0.6
COL16A1-209ENST00000470799 PFASO15067 1338 aa18.76■□□□□ 0.59
COL16A1-209ENST00000470799 NEDD4P46934 1319 aa18.76■□□□□ 0.59
COL16A1-209ENST00000470799 RAD50Q92878 1312 aa18.76■□□□□ 0.59
COL16A1-209ENST00000470799 DNM1LO00429 736 aa18.76■□□□□ 0.59
COL16A1-209ENST00000470799 PLA2G6O60733 806 aa18.76■□□□□ 0.59
COL16A1-209ENST00000470799 RARBP10826 455 aa18.76■□□□□ 0.59
COL16A1-209ENST00000470799 SLC16A2P36021 539 aa18.76■□□□□ 0.59
COL16A1-209ENST00000470799 TRERF1Q96PN7 1200 aa18.76■□□□□ 0.59
COL16A1-209ENST00000470799 RNF146Q9NTX7 359 aa18.76■□□□□ 0.59
COL16A1-209ENST00000470799 NRBP1Q9UHY1 535 aa18.76■□□□□ 0.59
COL16A1-209ENST00000470799 ZNF236Q9UL36 1845 aa18.75■□□□□ 0.59
COL16A1-209ENST00000470799 KDM4AO75164 1064 aa18.75■□□□□ 0.59
COL16A1-209ENST00000470799 NOVP48745 357 aa18.75■□□□□ 0.59
COL16A1-209ENST00000470799 ATN1P54259 1190 aaPredicted RBP18.75■□□□□ 0.59
COL16A1-209ENST00000470799 TKFCQ3LXA3 575 aa18.75■□□□□ 0.59
COL16A1-209ENST00000470799 CCDC178Q5BJE1 867 aa18.75■□□□□ 0.59
COL16A1-209ENST00000470799 TTBK2Q6IQ55 1244 aa18.75■□□□□ 0.59
COL16A1-209ENST00000470799 ZHX1Q9UKY1 873 aaPredicted RBP18.75■□□□□ 0.59
COL16A1-209ENST00000470799 CCPG1Q9ULG6 757 aa18.75■□□□□ 0.59
COL16A1-209ENST00000470799 COL11A1P12107 1806 aaPredicted RBP18.74■□□□□ 0.59
COL16A1-209ENST00000470799 B4E1Z4 1266 aa18.74■□□□□ 0.59
COL16A1-209ENST00000470799 POTEB2H3BUK9 544 aa18.74■□□□□ 0.59
COL16A1-209ENST00000470799 SLC34A2O95436 690 aa18.74■□□□□ 0.59
COL16A1-209ENST00000470799 COL6A1P12109 1028 aa18.74■□□□□ 0.59
COL16A1-209ENST00000470799 TAL1P17542 331 aaPredicted RBP18.74■□□□□ 0.59
COL16A1-209ENST00000470799 SYN1P17600 705 aa18.74■□□□□ 0.59
COL16A1-209ENST00000470799 SYDE2Q5VT97 1194 aa18.74■□□□□ 0.59
COL16A1-209ENST00000470799 KIAA1211Q6ZU35 1233 aa18.74■□□□□ 0.59
COL16A1-209ENST00000470799 MSL3Q8N5Y2 521 aaKnown RBP18.74■□□□□ 0.59
COL16A1-209ENST00000470799 KRT23Q9C075 422 aa18.74■□□□□ 0.59
COL16A1-209ENST00000470799 KAT14Q9H8E8 782 aa18.74■□□□□ 0.59
COL16A1-209ENST00000470799 XPNPEP3Q9NQH7 507 aa18.74■□□□□ 0.59
COL16A1-209ENST00000470799 PARP14Q460N5 1801 aa18.74■□□□□ 0.59
COL16A1-209ENST00000470799 CEP290O15078 2479 aa18.73■□□□□ 0.59
COL16A1-209ENST00000470799 DNAJC25-GNG10A0A024R161 153 aa18.73■□□□□ 0.59
COL16A1-209ENST00000470799 AKR1A1P14550 325 aa18.73■□□□□ 0.59
COL16A1-209ENST00000470799 NT5C2P49902 561 aa18.73■□□□□ 0.59
COL16A1-209ENST00000470799 LRRC26Q2I0M4 334 aa18.73■□□□□ 0.59
COL16A1-209ENST00000470799 UBAC1Q9BSL1 405 aa18.73■□□□□ 0.59
COL16A1-209ENST00000470799 CNNM2Q9H8M5 875 aa18.73■□□□□ 0.59
COL16A1-209ENST00000470799 RBM27Q9P2N5 1060 aaKnown RBP18.73■□□□□ 0.59
COL16A1-209ENST00000470799 ZNF536O15090 1300 aa18.73■□□□□ 0.59
COL16A1-209ENST00000470799 SYNGAP1Q96PV0 1343 aa18.73■□□□□ 0.59
COL16A1-209ENST00000470799 PDHBP11177 359 aa18.72■□□□□ 0.59
COL16A1-209ENST00000470799 CNTN2Q02246 1040 aa18.72■□□□□ 0.59
COL16A1-209ENST00000470799 NSMFQ6X4W1 530 aa18.72■□□□□ 0.59
COL16A1-209ENST00000470799 ZNF467Q7Z7K2 595 aaPredicted RBP18.72■□□□□ 0.59
COL16A1-209ENST00000470799 RNF180Q86T96 592 aa18.72■□□□□ 0.59
COL16A1-209ENST00000470799 DGKHQ86XP1 1220 aa18.72■□□□□ 0.59
COL16A1-209ENST00000470799 IL27Q8NEV9 243 aa18.72■□□□□ 0.59
COL16A1-209ENST00000470799 ZSCAN10Q96SZ4 725 aaPredicted RBP18.72■□□□□ 0.59
COL16A1-209ENST00000470799 ANO2Q9NQ90 1003 aa18.72■□□□□ 0.59
COL16A1-209ENST00000470799 FAM184BQ9ULE4 1060 aa18.72■□□□□ 0.59
COL16A1-209ENST00000470799 SNAI1O95863 264 aaPredicted RBP18.71■□□□□ 0.59
COL16A1-209ENST00000470799 PGK1P00558 417 aa18.71■□□□□ 0.59
COL16A1-209ENST00000470799 ICAM1P05362 532 aa18.71■□□□□ 0.59
COL16A1-209ENST00000470799 ZNF865P0CJ78 1059 aaPredicted RBP18.71■□□□□ 0.59
COL16A1-209ENST00000470799 TRDNQ13061 729 aa18.71■□□□□ 0.59
COL16A1-209ENST00000470799 LRRC41Q15345 812 aa18.71■□□□□ 0.59
COL16A1-209ENST00000470799 MAMDC4Q6UXC1 1216 aa18.71■□□□□ 0.59
COL16A1-209ENST00000470799 FERMT2Q96AC1 680 aa18.71■□□□□ 0.59
COL16A1-209ENST00000470799 IL25Q9H293 177 aa18.71■□□□□ 0.59
COL16A1-209ENST00000470799 A1CFQ9NQ94 594 aaKnown RBP18.71■□□□□ 0.59
COL16A1-209ENST00000470799 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.71■□□□□ 0.59
COL16A1-209ENST00000470799 ZSWIM5Q9P217 1185 aa18.71■□□□□ 0.59
COL16A1-209ENST00000470799 GOLGA8HP0CJ92 632 aa18.7■□□□□ 0.58
COL16A1-209ENST00000470799 ADCYAP1R1P41586 468 aa18.7■□□□□ 0.58
COL16A1-209ENST00000470799 ANAPC15P60006 121 aa18.7■□□□□ 0.58
COL16A1-209ENST00000470799 ZNF543Q08ER8 600 aa18.7■□□□□ 0.58
COL16A1-209ENST00000470799 ACVR2BQ13705 512 aa18.7■□□□□ 0.58
COL16A1-209ENST00000470799 MUM1L1Q5H9M0 696 aa18.7■□□□□ 0.58
COL16A1-209ENST00000470799 BTNL9Q6UXG8 535 aa18.7■□□□□ 0.58
COL16A1-209ENST00000470799 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.7■□□□□ 0.58
COL16A1-209ENST00000470799 ARMCX2Q7L311 632 aa18.7■□□□□ 0.58
COL16A1-209ENST00000470799 PNMA1Q8ND90 353 aa18.7■□□□□ 0.58
COL16A1-209ENST00000470799 LSG1Q9H089 658 aaKnown RBP18.7■□□□□ 0.58
COL16A1-209ENST00000470799 RANBP17Q9H2T7 1088 aaKnown RBP18.7■□□□□ 0.58
COL16A1-209ENST00000470799 PRKAG2Q9UGJ0 569 aa18.7■□□□□ 0.58
COL16A1-209ENST00000470799 ATP11BQ9Y2G3 1177 aa18.7■□□□□ 0.58
COL16A1-209ENST00000470799 U3KPZ7 1027 aaPredicted RBP18.7■□□□□ 0.58
COL16A1-209ENST00000470799 BECN1Q14457 450 aa18.69■□□□□ 0.58
COL16A1-209ENST00000470799 GPATCH4Q5T3I0 446 aaKnown RBP18.69■□□□□ 0.58
COL16A1-209ENST00000470799 NOL8Q76FK4 1167 aaKnown RBP18.69■□□□□ 0.58
COL16A1-209ENST00000470799 CCDC144CPQ8IYA2 1237 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms