RNA–Protein interactions for RNA: ENST00000470531.5

CHD3-208, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 3,744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-208ENST00000470531 FCER1AP12319 257 aa11.92□□□□□ -0.5
CHD3-208ENST00000470531 MAP3K9P80192 1104 aa11.92□□□□□ -0.5
CHD3-208ENST00000470531 EHHADHQ08426 723 aa11.92□□□□□ -0.5
CHD3-208ENST00000470531 TICAM2Q86XR7 235 aa11.92□□□□□ -0.5
CHD3-208ENST00000470531 COA7Q96BR5 231 aa11.92□□□□□ -0.5
CHD3-208ENST00000470531 SETDB2Q96T68 719 aa11.92□□□□□ -0.5
CHD3-208ENST00000470531 GOLPH3Q9H4A6 298 aa11.92□□□□□ -0.5
CHD3-208ENST00000470531 ZBTB21Q9ULJ3 1066 aa11.92□□□□□ -0.5
CHD3-208ENST00000470531 RIPOR2Q9Y4F9 1068 aa11.92□□□□□ -0.5
CHD3-208ENST00000470531 RGPD1P0DJD0 1748 aa11.92□□□□□ -0.5
CHD3-208ENST00000470531 A0A087X0B3 334 aa11.92□□□□□ -0.5
CHD3-208ENST00000470531 HIBADHP31937 336 aaKnown RBP11.92□□□□□ -0.5
CHD3-208ENST00000470531 SLC16A2P36021 539 aa11.92□□□□□ -0.5
CHD3-208ENST00000470531 PTPAQ15257 358 aa11.92□□□□□ -0.5
CHD3-208ENST00000470531 BLIDQ8IZY5 108 aa11.92□□□□□ -0.5
CHD3-208ENST00000470531 FNBP4Q8N3X1 1017 aaPredicted RBP11.92□□□□□ -0.5
CHD3-208ENST00000470531 CCDC155Q8N6L0 562 aa11.92□□□□□ -0.5
CHD3-208ENST00000470531 UBLCP1Q8WVY7 318 aaPredicted RBP11.92□□□□□ -0.5
CHD3-208ENST00000470531 TCEAL9Q9UHQ7 104 aa11.92□□□□□ -0.5
CHD3-208ENST00000470531 CDR1P51861 262 aa11.91□□□□□ -0.5
CHD3-208ENST00000470531 SNAP25P60880 206 aa11.91□□□□□ -0.5
CHD3-208ENST00000470531 IQCEQ6IPM2 695 aa11.91□□□□□ -0.5
CHD3-208ENST00000470531 SRLQ86TD4 932 aa11.91□□□□□ -0.5
CHD3-208ENST00000470531 MRRFQ96E11 262 aaKnown RBP11.91□□□□□ -0.5
CHD3-208ENST00000470531 MMS19Q96T76 1030 aa11.91□□□□□ -0.5
CHD3-208ENST00000470531 ZNF652Q9Y2D9 606 aa11.91□□□□□ -0.5
CHD3-208ENST00000470531 AKAP12Q02952 1782 aa11.91□□□□□ -0.5
CHD3-208ENST00000470531 SMCO2A6NFE2 343 aa11.91□□□□□ -0.5
CHD3-208ENST00000470531 POTEB2H3BUK9 544 aa11.91□□□□□ -0.5
CHD3-208ENST00000470531 PLEKP08567 350 aaPredicted RBP11.91□□□□□ -0.5
CHD3-208ENST00000470531 GNAT2P19087 354 aa11.91□□□□□ -0.5
CHD3-208ENST00000470531 ABCB4P21439 1286 aa11.91□□□□□ -0.5
CHD3-208ENST00000470531 ACTN2P35609 894 aa11.91□□□□□ -0.5
CHD3-208ENST00000470531 GUCY2DQ02846 1103 aa11.91□□□□□ -0.5
CHD3-208ENST00000470531 FCHSD1Q86WN1 690 aa11.91□□□□□ -0.5
CHD3-208ENST00000470531 SH2D3CQ8N5H7 860 aa11.91□□□□□ -0.5
CHD3-208ENST00000470531 SNX29Q8TEQ0 813 aa11.91□□□□□ -0.5
CHD3-208ENST00000470531 CTNNBL1Q8WYA6 563 aaPredicted RBP11.91□□□□□ -0.5
CHD3-208ENST00000470531 CNOT6LQ96LI5 555 aaKnown RBP11.91□□□□□ -0.5
CHD3-208ENST00000470531 ATG3Q9NT62 314 aa11.91□□□□□ -0.5
CHD3-208ENST00000470531 ABHD10Q9NUJ1 306 aa11.91□□□□□ -0.5
CHD3-208ENST00000470531 CIAO1O76071 339 aa11.91□□□□□ -0.5
CHD3-208ENST00000470531 GYPCP04921 128 aa11.91□□□□□ -0.5
CHD3-208ENST00000470531 LDHBP07195 334 aaKnown RBP11.91□□□□□ -0.5
CHD3-208ENST00000470531 ADCY1Q08828 1119 aa11.91□□□□□ -0.5
CHD3-208ENST00000470531 TMEM266Q2M3C6 531 aa11.91□□□□□ -0.5
CHD3-208ENST00000470531 ERFEQ4G0M1 354 aa11.91□□□□□ -0.5
CHD3-208ENST00000470531 HERC4Q5GLZ8 1057 aaPredicted RBP11.91□□□□□ -0.5
CHD3-208ENST00000470531 CFAP58Q5T655 872 aa11.91□□□□□ -0.5
CHD3-208ENST00000470531 LRCH2Q5VUJ6 765 aa11.91□□□□□ -0.5
CHD3-208ENST00000470531 TMEM139Q8IV31 216 aa11.91□□□□□ -0.5
CHD3-208ENST00000470531 SCLT1Q96NL6 688 aa11.91□□□□□ -0.5
CHD3-208ENST00000470531 FOXP1Q9H334 677 aaPredicted RBP11.91□□□□□ -0.5
CHD3-208ENST00000470531 HYOU1Q9Y4L1 999 aa11.91□□□□□ -0.5
CHD3-208ENST00000470531 SALL1Q9NSC2 1324 aa11.91□□□□□ -0.5
CHD3-208ENST00000470531 RTL9Q8NET4 1388 aa11.91□□□□□ -0.5
CHD3-208ENST00000470531 GOLGA6L7A0A1B0GV03 622 aa11.9□□□□□ -0.5
CHD3-208ENST00000470531 CCDC151A5D8V7 595 aa11.9□□□□□ -0.5
CHD3-208ENST00000470531 GNPATO15228 680 aa11.9□□□□□ -0.5
CHD3-208ENST00000470531 CEP104O60308 925 aa11.9□□□□□ -0.5
CHD3-208ENST00000470531 CCDC172P0C7W6 258 aa11.9□□□□□ -0.5
CHD3-208ENST00000470531 GJC1P36383 396 aa11.9□□□□□ -0.5
CHD3-208ENST00000470531 CYP4A11Q02928 519 aa11.9□□□□□ -0.5
CHD3-208ENST00000470531 ZYXQ15942 572 aaKnown RBP11.9□□□□□ -0.5
CHD3-208ENST00000470531 ICE2Q659A1 982 aa11.9□□□□□ -0.5
CHD3-208ENST00000470531 OTUD6BQ8N6M0 293 aa11.9□□□□□ -0.5
CHD3-208ENST00000470531 GOLGA5Q8TBA6 731 aa11.9□□□□□ -0.5
CHD3-208ENST00000470531 TSG101Q99816 390 aa11.9□□□□□ -0.5
CHD3-208ENST00000470531 NCAPGQ9BPX3 1015 aa11.9□□□□□ -0.5
CHD3-208ENST00000470531 EHD4Q9H223 541 aa11.9□□□□□ -0.5
CHD3-208ENST00000470531 SRP68Q9UHB9 627 aaKnown RBP11.9□□□□□ -0.5
CHD3-208ENST00000470531 SPATA31D1Q6ZQQ2 1576 aa11.9□□□□□ -0.5
CHD3-208ENST00000470531 KLRF2D3W0D1 207 aa11.9□□□□□ -0.5
CHD3-208ENST00000470531 KLRK1P26718 216 aa11.9□□□□□ -0.5
CHD3-208ENST00000470531 GGCXP38435 758 aa11.9□□□□□ -0.5
CHD3-208ENST00000470531 BIRC2Q13490 618 aa11.9□□□□□ -0.5
CHD3-208ENST00000470531 USH1GQ495M9 461 aa11.9□□□□□ -0.5
CHD3-208ENST00000470531 NFRKBQ6P4R8 1299 aa11.9□□□□□ -0.5
CHD3-208ENST00000470531 KCND1Q9NSA2 647 aa11.9□□□□□ -0.5
CHD3-208ENST00000470531 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.9□□□□□ -0.5
CHD3-208ENST00000470531 PDCLQ13371 301 aa11.9□□□□□ -0.5
CHD3-208ENST00000470531 BRD3Q15059 726 aa11.9□□□□□ -0.5
CHD3-208ENST00000470531 SRBD1Q8N5C6 995 aaKnown RBP11.9□□□□□ -0.5
CHD3-208ENST00000470531 CELF1Q92879 486 aaKnown RBP11.9□□□□□ -0.5
CHD3-208ENST00000470531 MS4A14Q96JA4 679 aa11.9□□□□□ -0.5
CHD3-208ENST00000470531 DPH5Q9H2P9 285 aa11.9□□□□□ -0.5
CHD3-208ENST00000470531 GPR108Q9NPR9 543 aa11.9□□□□□ -0.5
CHD3-208ENST00000470531 FRMD3A2A2Y4 597 aa11.89□□□□□ -0.51
CHD3-208ENST00000470531 ERVV-2B6SEH9 535 aa11.89□□□□□ -0.51
CHD3-208ENST00000470531 IVLP07476 585 aa11.89□□□□□ -0.51
CHD3-208ENST00000470531 PLCG1P19174 1290 aa11.89□□□□□ -0.51
CHD3-208ENST00000470531 CRKLP46109 303 aaKnown RBP11.89□□□□□ -0.51
CHD3-208ENST00000470531 POLR2FP61218 127 aaKnown RBP11.89□□□□□ -0.51
CHD3-208ENST00000470531 TCP11X2Q5H9J9 407 aa11.89□□□□□ -0.51
CHD3-208ENST00000470531 ADGRA1Q86SQ6 560 aa11.89□□□□□ -0.51
CHD3-208ENST00000470531 DYDC1Q8WWB3 177 aa11.89□□□□□ -0.51
CHD3-208ENST00000470531 KIFC2Q96AC6 838 aa11.89□□□□□ -0.51
CHD3-208ENST00000470531 BPIFA3Q9BQP9 254 aa11.89□□□□□ -0.51
CHD3-208ENST00000470531 AGLP35573 1532 aa11.89□□□□□ -0.51
CHD3-208ENST00000470531 MEIS1O00470 390 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms