RNA–Protein interactions for RNA: ENST00000470338.1

TOP3B-215, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-215ENST00000470338 CDC45O75419 566 aa16.59■□□□□ 0.25
TOP3B-215ENST00000470338 PGK2P07205 417 aa16.59■□□□□ 0.25
TOP3B-215ENST00000470338 CCND3P30281 292 aaPredicted RBP16.59■□□□□ 0.25
TOP3B-215ENST00000470338 CYP2C19P33261 490 aa16.59■□□□□ 0.25
TOP3B-215ENST00000470338 SLC16A2P36021 539 aa16.59■□□□□ 0.25
TOP3B-215ENST00000470338 TKFCQ3LXA3 575 aa16.59■□□□□ 0.25
TOP3B-215ENST00000470338 GPATCH4Q5T3I0 446 aaKnown RBP16.59■□□□□ 0.25
TOP3B-215ENST00000470338 SYDE2Q5VT97 1194 aa16.59■□□□□ 0.25
TOP3B-215ENST00000470338 STOX1Q6ZVD7 989 aa16.59■□□□□ 0.25
TOP3B-215ENST00000470338 NCOA7Q8NI08 942 aa16.59■□□□□ 0.25
TOP3B-215ENST00000470338 AGBL1Q96MI9 1066 aa16.59■□□□□ 0.25
TOP3B-215ENST00000470338 RANBP17Q9H2T7 1088 aaKnown RBP16.59■□□□□ 0.25
TOP3B-215ENST00000470338 SLC4A3P48751 1232 aa16.58■□□□□ 0.24
TOP3B-215ENST00000470338 SNAP25P60880 206 aa16.58■□□□□ 0.24
TOP3B-215ENST00000470338 NECTIN1Q15223 517 aa16.58■□□□□ 0.24
TOP3B-215ENST00000470338 LHX8Q68G74 356 aa16.58■□□□□ 0.24
TOP3B-215ENST00000470338 TRPV1Q8NER1 839 aa16.58■□□□□ 0.24
TOP3B-215ENST00000470338 OGDHLQ9ULD0 1010 aa16.58■□□□□ 0.24
TOP3B-215ENST00000470338 MCM3APO60318 1980 aa16.58■□□□□ 0.24
TOP3B-215ENST00000470338 ICAM1P05362 532 aa16.57■□□□□ 0.24
TOP3B-215ENST00000470338 CYBAP13498 195 aa16.57■□□□□ 0.24
TOP3B-215ENST00000470338 IFIT1BQ5T764 474 aaKnown RBP16.57■□□□□ 0.24
TOP3B-215ENST00000470338 CCDC174Q6PII3 467 aa16.57■□□□□ 0.24
TOP3B-215ENST00000470338 CASC1Q6TDU7 716 aa16.57■□□□□ 0.24
TOP3B-215ENST00000470338 RALYLQ86SE5 291 aaKnown RBP16.57■□□□□ 0.24
TOP3B-215ENST00000470338 ANKLE1Q8NAG6 615 aa16.57■□□□□ 0.24
TOP3B-215ENST00000470338 DDX11Q96FC9 970 aa16.57■□□□□ 0.24
TOP3B-215ENST00000470338 TRERF1Q96PN7 1200 aa16.57■□□□□ 0.24
TOP3B-215ENST00000470338 ACAD9Q9H845 621 aa16.57■□□□□ 0.24
TOP3B-215ENST00000470338 ANO2Q9NQ90 1003 aa16.57■□□□□ 0.24
TOP3B-215ENST00000470338 SLC27A2O14975 620 aa16.56■□□□□ 0.24
TOP3B-215ENST00000470338 FARP2O94887 1054 aaPredicted RBP16.56■□□□□ 0.24
TOP3B-215ENST00000470338 GOLGA8HP0CJ92 632 aa16.56■□□□□ 0.24
TOP3B-215ENST00000470338 ALAS1P13196 640 aa16.56■□□□□ 0.24
TOP3B-215ENST00000470338 MB21D2Q8IYB1 491 aaPredicted RBP16.56■□□□□ 0.24
TOP3B-215ENST00000470338 ANKRD35Q8N283 1001 aa16.56■□□□□ 0.24
TOP3B-215ENST00000470338 MSL3Q8N5Y2 521 aaKnown RBP16.56■□□□□ 0.24
TOP3B-215ENST00000470338 TINF2Q9BSI4 451 aa16.56■□□□□ 0.24
TOP3B-215ENST00000470338 HOMER2Q9NSB8 354 aa16.56■□□□□ 0.24
TOP3B-215ENST00000470338 RNF146Q9NTX7 359 aa16.56■□□□□ 0.24
TOP3B-215ENST00000470338 LCTP09848 1927 aa16.55■□□□□ 0.24
TOP3B-215ENST00000470338 IFIT3O14879 490 aaKnown RBP16.55■□□□□ 0.24
TOP3B-215ENST00000470338 MNX1P50219 401 aaPredicted RBP16.55■□□□□ 0.24
TOP3B-215ENST00000470338 ANTXR2P58335 489 aa16.55■□□□□ 0.24
TOP3B-215ENST00000470338 ASPRV1Q53RT3 343 aa16.55■□□□□ 0.24
TOP3B-215ENST00000470338 CREB3L3Q68CJ9 461 aa16.55■□□□□ 0.24
TOP3B-215ENST00000470338 MAMDC4Q6UXC1 1216 aa16.55■□□□□ 0.24
TOP3B-215ENST00000470338 ZNF467Q7Z7K2 595 aaPredicted RBP16.55■□□□□ 0.24
TOP3B-215ENST00000470338 IGDCC4Q8TDY8 1250 aa16.55■□□□□ 0.24
TOP3B-215ENST00000470338 NRBP1Q9UHY1 535 aa16.55■□□□□ 0.24
TOP3B-215ENST00000470338 CCPG1Q9ULG6 757 aa16.55■□□□□ 0.24
TOP3B-215ENST00000470338 MSCO60682 206 aa16.54■□□□□ 0.24
TOP3B-215ENST00000470338 PARP1P09874 1014 aaKnown RBP16.54■□□□□ 0.24
TOP3B-215ENST00000470338 CNGA1P29973 690 aa16.54■□□□□ 0.24
TOP3B-215ENST00000470338 SART3Q15020 963 aaKnown RBP16.54■□□□□ 0.24
TOP3B-215ENST00000470338 MUM1L1Q5H9M0 696 aa16.54■□□□□ 0.24
TOP3B-215ENST00000470338 PRAMEF19Q5SWL8 479 aa16.54■□□□□ 0.24
TOP3B-215ENST00000470338 CHST3Q7LGC8 479 aa16.54■□□□□ 0.24
TOP3B-215ENST00000470338 FGD4Q96M96 766 aa16.54■□□□□ 0.24
TOP3B-215ENST00000470338 MTA3Q9BTC8 594 aa16.54■□□□□ 0.24
TOP3B-215ENST00000470338 UBA5Q9GZZ9 404 aa16.54■□□□□ 0.24
TOP3B-215ENST00000470338 A1CFQ9NQ94 594 aaKnown RBP16.54■□□□□ 0.24
TOP3B-215ENST00000470338 DDX20Q9UHI6 824 aaKnown RBP16.54■□□□□ 0.24
TOP3B-215ENST00000470338 PNMA2Q9UL42 364 aa16.54■□□□□ 0.24
TOP3B-215ENST00000470338 ALPK3Q96L96 1907 aa16.53■□□□□ 0.24
TOP3B-215ENST00000470338 PFASO15067 1338 aa16.53■□□□□ 0.24
TOP3B-215ENST00000470338 WDR19Q8NEZ3 1342 aa16.53■□□□□ 0.24
TOP3B-215ENST00000470338 SYNGAP1Q96PV0 1343 aa16.53■□□□□ 0.24
TOP3B-215ENST00000470338 BAZ2BQ9UIF8 2168 aaKnown RBP16.53■□□□□ 0.24
TOP3B-215ENST00000470338 ERICH2A1L162 156 aa16.53■□□□□ 0.24
TOP3B-215ENST00000470338 SEPT4O43236 478 aa16.53■□□□□ 0.24
TOP3B-215ENST00000470338 WTAPQ15007 396 aa16.53■□□□□ 0.24
TOP3B-215ENST00000470338 FAM133AQ8N9E0 248 aa16.53■□□□□ 0.24
TOP3B-215ENST00000470338 PAWRQ96IZ0 340 aaKnown RBP16.53■□□□□ 0.24
TOP3B-215ENST00000470338 CPVLQ9H3G5 476 aa16.53■□□□□ 0.24
TOP3B-215ENST00000470338 SENP2Q9HC62 589 aa16.53■□□□□ 0.24
TOP3B-215ENST00000470338 PALM3A6NDB9 673 aaPredicted RBP16.52■□□□□ 0.24
TOP3B-215ENST00000470338 SNAI1O95863 264 aaPredicted RBP16.52■□□□□ 0.24
TOP3B-215ENST00000470338 CNTN2Q02246 1040 aa16.52■□□□□ 0.24
TOP3B-215ENST00000470338 TSGA10IPQ3SY00 556 aa16.52■□□□□ 0.24
TOP3B-215ENST00000470338 TMEM67Q5HYA8 995 aa16.52■□□□□ 0.24
TOP3B-215ENST00000470338 NECAB2Q7Z6G3 386 aa16.52■□□□□ 0.24
TOP3B-215ENST00000470338 ADGRF4Q8IZF3 695 aa16.52■□□□□ 0.24
TOP3B-215ENST00000470338 STAG2Q8N3U4 1231 aa16.52■□□□□ 0.24
TOP3B-215ENST00000470338 DIS3LQ8TF46 1054 aaKnown RBP16.52■□□□□ 0.24
TOP3B-215ENST00000470338 CYP39A1Q9NYL5 469 aa16.52■□□□□ 0.24
TOP3B-215ENST00000470338 MAD2L2Q9UI95 211 aa16.52■□□□□ 0.24
TOP3B-215ENST00000470338 POTEB2H3BUK9 544 aa16.51■□□□□ 0.23
TOP3B-215ENST00000470338 ZNF865P0CJ78 1059 aaPredicted RBP16.51■□□□□ 0.23
TOP3B-215ENST00000470338 TAL1P17542 331 aaPredicted RBP16.51■□□□□ 0.23
TOP3B-215ENST00000470338 MCM5P33992 734 aa16.51■□□□□ 0.23
TOP3B-215ENST00000470338 TROAPQ12815 778 aa16.51■□□□□ 0.23
TOP3B-215ENST00000470338 COL9A3Q14050 684 aaPredicted RBP16.51■□□□□ 0.23
TOP3B-215ENST00000470338 RNF20Q5VTR2 975 aa16.51■□□□□ 0.23
TOP3B-215ENST00000470338 CLEC4DQ8WXI8 215 aa16.51■□□□□ 0.23
TOP3B-215ENST00000470338 HTATIP2Q9BUP3 242 aa16.51■□□□□ 0.23
TOP3B-215ENST00000470338 DNAH12Q6ZR08 3092 aa16.51■□□□□ 0.23
TOP3B-215ENST00000470338 SOWAHBA6NEL2 793 aa16.5■□□□□ 0.23
TOP3B-215ENST00000470338 KLRF2D3W0D1 207 aa16.5■□□□□ 0.23
TOP3B-215ENST00000470338 PRC1O43663 620 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms