RNA–Protein interactions for RNA: ENST00000469744.1

MRPL28-208, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,467 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-208ENST00000469744 DDX20Q9UHI6 824 aaKnown RBP20.61■□□□□ 0.89
MRPL28-208ENST00000469744 DNAH12Q6ZR08 3092 aa20.61■□□□□ 0.89
MRPL28-208ENST00000469744 PTMSP20962 102 aa20.6■□□□□ 0.89
MRPL28-208ENST00000469744 COPB2P35606 906 aa20.6■□□□□ 0.89
MRPL28-208ENST00000469744 SNAP25P60880 206 aa20.6■□□□□ 0.89
MRPL28-208ENST00000469744 STAG1Q8WVM7 1258 aa20.6■□□□□ 0.89
MRPL28-208ENST00000469744 C11orf49Q9H6J7 331 aa20.6■□□□□ 0.89
MRPL28-208ENST00000469744 RANBP2P49792 3224 aaKnown RBP20.59■□□□□ 0.89
MRPL28-208ENST00000469744 EVI5O60447 810 aa20.59■□□□□ 0.89
MRPL28-208ENST00000469744 CCDC96Q2M329 555 aa20.59■□□□□ 0.89
MRPL28-208ENST00000469744 HOMER2Q9NSB8 354 aa20.59■□□□□ 0.89
MRPL28-208ENST00000469744 TRIOBPQ9H2D6 2365 aa20.59■□□□□ 0.89
MRPL28-208ENST00000469744 PFASO15067 1338 aa20.59■□□□□ 0.89
MRPL28-208ENST00000469744 ZNF213O14771 459 aa20.58■□□□□ 0.89
MRPL28-208ENST00000469744 ATP2A1O14983 1001 aa20.58■□□□□ 0.89
MRPL28-208ENST00000469744 NOVP48745 357 aa20.58■□□□□ 0.89
MRPL28-208ENST00000469744 NEK4P51957 841 aa20.58■□□□□ 0.89
MRPL28-208ENST00000469744 GSE1Q14687 1217 aa20.58■□□□□ 0.89
MRPL28-208ENST00000469744 ZNF792Q3KQV3 632 aa20.58■□□□□ 0.89
MRPL28-208ENST00000469744 CLEC17AQ6ZS10 378 aa20.58■□□□□ 0.89
MRPL28-208ENST00000469744 KCNB2Q92953 911 aa20.58■□□□□ 0.89
MRPL28-208ENST00000469744 TMEM47Q9BQJ4 181 aa20.58■□□□□ 0.89
MRPL28-208ENST00000469744 SMCHD1A6NHR9 2005 aa20.58■□□□□ 0.88
MRPL28-208ENST00000469744 DDX11L8A8MPP1 907 aa20.57■□□□□ 0.88
MRPL28-208ENST00000469744 NUCB2P80303 420 aa20.57■□□□□ 0.88
MRPL28-208ENST00000469744 RCSD1Q6JBY9 416 aa20.57■□□□□ 0.88
MRPL28-208ENST00000469744 FAM160B2Q86V87 743 aa20.57■□□□□ 0.88
MRPL28-208ENST00000469744 CHURC1Q8WUH1 139 aa20.57■□□□□ 0.88
MRPL28-208ENST00000469744 GBP4Q96PP9 640 aa20.57■□□□□ 0.88
MRPL28-208ENST00000469744 ZKSCAN3Q9BRR0 538 aa20.57■□□□□ 0.88
MRPL28-208ENST00000469744 COLQQ9Y215 455 aaPredicted RBP20.57■□□□□ 0.88
MRPL28-208ENST00000469744 FRMPD2Q68DX3 1309 aaPredicted RBP20.57■□□□□ 0.88
MRPL28-208ENST00000469744 TOP1P11387 765 aaKnown RBP20.56■□□□□ 0.88
MRPL28-208ENST00000469744 TAL1P17542 331 aaPredicted RBP20.56■□□□□ 0.88
MRPL28-208ENST00000469744 TTBK2Q6IQ55 1244 aa20.56■□□□□ 0.88
MRPL28-208ENST00000469744 CCDC174Q6PII3 467 aa20.56■□□□□ 0.88
MRPL28-208ENST00000469744 C7orf61Q8IZ16 206 aa20.56■□□□□ 0.88
MRPL28-208ENST00000469744 DDX11Q96FC9 970 aa20.56■□□□□ 0.88
MRPL28-208ENST00000469744 AGBL1Q96MI9 1066 aa20.56■□□□□ 0.88
MRPL28-208ENST00000469744 DSCC1Q9BVC3 393 aa20.56■□□□□ 0.88
MRPL28-208ENST00000469744 RNF41Q9H4P4 317 aaPredicted RBP20.56■□□□□ 0.88
MRPL28-208ENST00000469744 TCP11L1Q9NUJ3 509 aa20.56■□□□□ 0.88
MRPL28-208ENST00000469744 NR2E3Q9Y5X4 410 aa20.56■□□□□ 0.88
MRPL28-208ENST00000469744 MCM3APO60318 1980 aa20.56■□□□□ 0.88
MRPL28-208ENST00000469744 MSCO60682 206 aa20.56■□□□□ 0.88
MRPL28-208ENST00000469744 SLC16A2P36021 539 aa20.56■□□□□ 0.88
MRPL28-208ENST00000469744 CUL4AQ13619 759 aa20.56■□□□□ 0.88
MRPL28-208ENST00000469744 HABP4Q5JVS0 413 aaKnown RBP20.56■□□□□ 0.88
MRPL28-208ENST00000469744 CHRDL2Q6WN34 429 aa20.56■□□□□ 0.88
MRPL28-208ENST00000469744 TINF2Q9BSI4 451 aa20.56■□□□□ 0.88
MRPL28-208ENST00000469744 PCDH10Q9P2E7 1040 aa20.56■□□□□ 0.88
MRPL28-208ENST00000469744 PRR12Q9ULL5 1215 aa20.56■□□□□ 0.88
MRPL28-208ENST00000469744 ZNF536O15090 1300 aa20.55■□□□□ 0.88
MRPL28-208ENST00000469744 MYCNP04198 464 aaPredicted RBP20.55■□□□□ 0.88
MRPL28-208ENST00000469744 PCP11498 1178 aaKnown RBP20.55■□□□□ 0.88
MRPL28-208ENST00000469744 COL6A1P12109 1028 aa20.55■□□□□ 0.88
MRPL28-208ENST00000469744 OAZ1P54368 228 aa20.55■□□□□ 0.88
MRPL28-208ENST00000469744 DCAF4Q8WV16 495 aa20.55■□□□□ 0.88
MRPL28-208ENST00000469744 ESR2Q92731 530 aa20.55■□□□□ 0.88
MRPL28-208ENST00000469744 TNPO1Q92973 898 aaKnown RBP20.55■□□□□ 0.88
MRPL28-208ENST00000469744 INTS4Q96HW7 963 aaKnown RBP20.55■□□□□ 0.88
MRPL28-208ENST00000469744 GPCPD1Q9NPB8 672 aa20.55■□□□□ 0.88
MRPL28-208ENST00000469744 DIS3Q9Y2L1 958 aaKnown RBP20.55■□□□□ 0.88
MRPL28-208ENST00000469744 DNAJC25-GNG10A0A024R161 153 aa20.54■□□□□ 0.88
MRPL28-208ENST00000469744 B4E1Z4 1266 aa20.54■□□□□ 0.88
MRPL28-208ENST00000469744 SEPT4O43236 478 aa20.54■□□□□ 0.88
MRPL28-208ENST00000469744 KDM4AO75164 1064 aa20.54■□□□□ 0.88
MRPL28-208ENST00000469744 ANKRD35Q8N283 1001 aa20.54■□□□□ 0.88
MRPL28-208ENST00000469744 TM6SF1Q9BZW5 370 aa20.54■□□□□ 0.88
MRPL28-208ENST00000469744 PLA2G6O60733 806 aa20.53■□□□□ 0.88
MRPL28-208ENST00000469744 FDX1P10109 184 aa20.53■□□□□ 0.88
MRPL28-208ENST00000469744 ALAS1P13196 640 aa20.53■□□□□ 0.88
MRPL28-208ENST00000469744 IMMTQ16891 758 aaKnown RBP20.53■□□□□ 0.88
MRPL28-208ENST00000469744 GJC2Q5T442 439 aaPredicted RBP20.53■□□□□ 0.88
MRPL28-208ENST00000469744 CHST13Q8NET6 341 aa20.53■□□□□ 0.88
MRPL28-208ENST00000469744 RNF146Q9NTX7 359 aa20.53■□□□□ 0.88
MRPL28-208ENST00000469744 ZMYND8Q9ULU4 1186 aaPredicted RBP20.53■□□□□ 0.88
MRPL28-208ENST00000469744 SNX14Q9Y5W7 946 aa20.53■□□□□ 0.88
MRPL28-208ENST00000469744 PDHBP11177 359 aa20.52■□□□□ 0.88
MRPL28-208ENST00000469744 LRRC26Q2I0M4 334 aa20.52■□□□□ 0.88
MRPL28-208ENST00000469744 LENG1Q96BZ8 264 aaPredicted RBP20.52■□□□□ 0.88
MRPL28-208ENST00000469744 FGD4Q96M96 766 aa20.52■□□□□ 0.88
MRPL28-208ENST00000469744 SENP6Q9GZR1 1112 aaPredicted RBP20.52■□□□□ 0.88
MRPL28-208ENST00000469744 ACAD9Q9H845 621 aa20.52■□□□□ 0.88
MRPL28-208ENST00000469744 FBXO40Q9UH90 709 aa20.52■□□□□ 0.88
MRPL28-208ENST00000469744 SYDE2Q5VT97 1194 aa20.51■□□□□ 0.87
MRPL28-208ENST00000469744 TMX3Q96JJ7 454 aa20.51■□□□□ 0.87
MRPL28-208ENST00000469744 TRERF1Q96PN7 1200 aa20.51■□□□□ 0.87
MRPL28-208ENST00000469744 CTNNA3Q9UI47 895 aa20.51■□□□□ 0.87
MRPL28-208ENST00000469744 DNM1LO00429 736 aa20.5■□□□□ 0.87
MRPL28-208ENST00000469744 SLC34A2O95436 690 aa20.5■□□□□ 0.87
MRPL28-208ENST00000469744 ZNF865P0CJ78 1059 aaPredicted RBP20.5■□□□□ 0.87
MRPL28-208ENST00000469744 SYN1P17600 705 aa20.5■□□□□ 0.87
MRPL28-208ENST00000469744 CNTN2Q02246 1040 aa20.5■□□□□ 0.87
MRPL28-208ENST00000469744 PTH1RQ03431 593 aa20.5■□□□□ 0.87
MRPL28-208ENST00000469744 MUM1L1Q5H9M0 696 aa20.5■□□□□ 0.87
MRPL28-208ENST00000469744 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.5■□□□□ 0.87
MRPL28-208ENST00000469744 MAP4K1Q92918 833 aa20.5■□□□□ 0.87
MRPL28-208ENST00000469744 TTC14Q96N46 770 aa20.5■□□□□ 0.87
MRPL28-208ENST00000469744 A1CFQ9NQ94 594 aaKnown RBP20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms