RNA–Protein interactions for RNA: ENST00000469163.1

NUP50-214, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 3,507 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-214ENST00000469163 UNC45AQ9H3U1 944 aa11.09□□□□□ -0.63
NUP50-214ENST00000469163 PNPLA7Q6ZV29 1317 aa11.09□□□□□ -0.63
NUP50-214ENST00000469163 BAG3O95817 575 aa11.09□□□□□ -0.63
NUP50-214ENST00000469163 TSPY3P0CV98 308 aa11.09□□□□□ -0.63
NUP50-214ENST00000469163 TSPY8P0CW00 308 aa11.09□□□□□ -0.63
NUP50-214ENST00000469163 PDHBP11177 359 aa11.09□□□□□ -0.63
NUP50-214ENST00000469163 ADD2P35612 726 aa11.09□□□□□ -0.63
NUP50-214ENST00000469163 SNCBQ16143 134 aa11.09□□□□□ -0.63
NUP50-214ENST00000469163 MAP3K11Q16584 847 aa11.09□□□□□ -0.63
NUP50-214ENST00000469163 RC3H1Q5TC82 1133 aaKnown RBP11.09□□□□□ -0.63
NUP50-214ENST00000469163 HOOK3Q86VS8 718 aa11.09□□□□□ -0.63
NUP50-214ENST00000469163 SDR16C5Q8N3Y7 309 aa11.09□□□□□ -0.63
NUP50-214ENST00000469163 PPP1R13BQ96KQ4 1090 aa11.09□□□□□ -0.63
NUP50-214ENST00000469163 TDRD3Q9H7E2 651 aaKnown RBP11.09□□□□□ -0.63
NUP50-214ENST00000469163 GOLGA6L10A6NI86 522 aa11.09□□□□□ -0.63
NUP50-214ENST00000469163 ALDH1B1P30837 517 aa11.09□□□□□ -0.63
NUP50-214ENST00000469163 PAPOLAP51003 745 aaKnown RBP11.09□□□□□ -0.63
NUP50-214ENST00000469163 RHBDL3P58872 404 aa11.09□□□□□ -0.63
NUP50-214ENST00000469163 PPP2R3AQ06190 1150 aa11.09□□□□□ -0.63
NUP50-214ENST00000469163 TRIM29Q14134 588 aa11.09□□□□□ -0.63
NUP50-214ENST00000469163 ZMYM1Q5SVZ6 1142 aa11.09□□□□□ -0.63
NUP50-214ENST00000469163 PLA2G4DQ86XP0 818 aa11.09□□□□□ -0.63
NUP50-214ENST00000469163 SUGCTQ9HAC7 445 aa11.09□□□□□ -0.63
NUP50-214ENST00000469163 CDHR2Q9BYE9 1310 aa11.09□□□□□ -0.63
NUP50-214ENST00000469163 ZNF609O15014 1411 aa11.08□□□□□ -0.64
NUP50-214ENST00000469163 BECN2A8MW95 431 aa11.08□□□□□ -0.64
NUP50-214ENST00000469163 ZNF165P49910 485 aa11.08□□□□□ -0.64
NUP50-214ENST00000469163 DNM1Q05193 864 aaKnown RBP11.08□□□□□ -0.64
NUP50-214ENST00000469163 UBE4AQ14139 1066 aa11.08□□□□□ -0.64
NUP50-214ENST00000469163 TBC1D10CQ8IV04 446 aa11.08□□□□□ -0.64
NUP50-214ENST00000469163 FAM71BQ8TC56 605 aa11.08□□□□□ -0.64
NUP50-214ENST00000469163 MAP4K1Q92918 833 aa11.08□□□□□ -0.64
NUP50-214ENST00000469163 FTOQ9C0B1 505 aaKnown RBP eCLIP11.08□□□□□ -0.64
NUP50-214ENST00000469163 CENPFP49454 3210 aa11.08□□□□□ -0.64
NUP50-214ENST00000469163 COL22A1Q8NFW1 1626 aaPredicted RBP11.08□□□□□ -0.64
NUP50-214ENST00000469163 WDR33Q9C0J8 1336 aaKnown RBP11.08□□□□□ -0.64
NUP50-214ENST00000469163 USP17L3A6NCW0 530 aa11.08□□□□□ -0.64
NUP50-214ENST00000469163 USP17L4A6NCW7 530 aa11.08□□□□□ -0.64
NUP50-214ENST00000469163 ZNF24P17028 368 aa11.08□□□□□ -0.64
NUP50-214ENST00000469163 METAP2P50579 478 aaKnown RBP eCLIP11.08□□□□□ -0.64
NUP50-214ENST00000469163 SLC8A3P57103 927 aa11.08□□□□□ -0.64
NUP50-214ENST00000469163 USP17L1Q7RTZ2 530 aa11.08□□□□□ -0.64
NUP50-214ENST00000469163 OR8K1Q8NGG5 319 aa11.08□□□□□ -0.64
NUP50-214ENST00000469163 PAPOLBQ9NRJ5 636 aaKnown RBP11.08□□□□□ -0.64
NUP50-214ENST00000469163 MAPK8IP1Q9UQF2 711 aa11.08□□□□□ -0.64
NUP50-214ENST00000469163 ERLIN1O75477 346 aa11.08□□□□□ -0.64
NUP50-214ENST00000469163 GDF11O95390 407 aa11.08□□□□□ -0.64
NUP50-214ENST00000469163 FOXD4Q12950 439 aaPredicted RBP11.08□□□□□ -0.64
NUP50-214ENST00000469163 WTAPQ15007 396 aa11.08□□□□□ -0.64
NUP50-214ENST00000469163 SFMBT2Q5VUG0 894 aa11.08□□□□□ -0.64
NUP50-214ENST00000469163 RASGRP2Q7LDG7 609 aa11.08□□□□□ -0.64
NUP50-214ENST00000469163 TTLL6Q8N841 843 aa11.08□□□□□ -0.64
NUP50-214ENST00000469163 TCP11Q8WWU5 503 aa11.08□□□□□ -0.64
NUP50-214ENST00000469163 CLEC11AQ9Y240 323 aa11.08□□□□□ -0.64
NUP50-214ENST00000469163 CCDC151A5D8V7 595 aa11.07□□□□□ -0.64
NUP50-214ENST00000469163 IPO5O00410 1097 aaKnown RBP11.07□□□□□ -0.64
NUP50-214ENST00000469163 EPB41L2O43491 1005 aaKnown RBP11.07□□□□□ -0.64
NUP50-214ENST00000469163 MARCH6O60337 910 aa11.07□□□□□ -0.64
NUP50-214ENST00000469163 ZFYP08048 801 aaPredicted RBP11.07□□□□□ -0.64
NUP50-214ENST00000469163 RPS6KB1P23443 525 aa11.07□□□□□ -0.64
NUP50-214ENST00000469163 ETF1P62495 437 aaKnown RBP11.07□□□□□ -0.64
NUP50-214ENST00000469163 MAP3K9P80192 1104 aa11.07□□□□□ -0.64
NUP50-214ENST00000469163 SLC7A5Q01650 507 aa11.07□□□□□ -0.64
NUP50-214ENST00000469163 TFAP4Q01664 338 aa11.07□□□□□ -0.64
NUP50-214ENST00000469163 TBC1D10BQ4KMP7 808 aaPredicted RBP11.07□□□□□ -0.64
NUP50-214ENST00000469163 SDCCAG8Q86SQ7 713 aaPredicted RBP11.07□□□□□ -0.64
NUP50-214ENST00000469163 MASTLQ96GX5 879 aa11.07□□□□□ -0.64
NUP50-214ENST00000469163 TRAIPQ9BWF2 469 aa11.07□□□□□ -0.64
NUP50-214ENST00000469163 NUP62CLQ9H1M0 184 aa11.07□□□□□ -0.64
NUP50-214ENST00000469163 HDAC6Q9UBN7 1215 aa11.07□□□□□ -0.64
NUP50-214ENST00000469163 RNF40O75150 1001 aa11.07□□□□□ -0.64
NUP50-214ENST00000469163 CYP11B2P19099 503 aa11.07□□□□□ -0.64
NUP50-214ENST00000469163 SNAP25P60880 206 aa11.07□□□□□ -0.64
NUP50-214ENST00000469163 CCDC40Q4G0X9 1142 aa11.07□□□□□ -0.64
NUP50-214ENST00000469163 EAPPQ56P03 285 aaPredicted RBP11.07□□□□□ -0.64
NUP50-214ENST00000469163 IFIT1BQ5T764 474 aaKnown RBP11.07□□□□□ -0.64
NUP50-214ENST00000469163 DHX32Q7L7V1 743 aaKnown RBP11.07□□□□□ -0.64
NUP50-214ENST00000469163 PARP9Q8IXQ6 854 aa11.07□□□□□ -0.64
NUP50-214ENST00000469163 LRRC47Q8N1G4 583 aaKnown RBP11.07□□□□□ -0.64
NUP50-214ENST00000469163 TRIML1Q8N9V2 468 aa11.07□□□□□ -0.64
NUP50-214ENST00000469163 RUFY1Q96T51 708 aa11.07□□□□□ -0.64
NUP50-214ENST00000469163 TSC22D3Q99576 134 aa11.07□□□□□ -0.64
NUP50-214ENST00000469163 FRMD4BQ9Y2L6 1034 aa11.07□□□□□ -0.64
NUP50-214ENST00000469163 MRC1P22897 1456 aa11.07□□□□□ -0.64
NUP50-214ENST00000469163 SMIM24O75264 130 aa11.06□□□□□ -0.64
NUP50-214ENST00000469163 XBP1P17861 261 aa11.06□□□□□ -0.64
NUP50-214ENST00000469163 ME1P48163 572 aa11.06□□□□□ -0.64
NUP50-214ENST00000469163 CCZ1BP86790 482 aa11.06□□□□□ -0.64
NUP50-214ENST00000469163 CCZ1P86791 482 aaPredicted RBP11.06□□□□□ -0.64
NUP50-214ENST00000469163 SF3B3Q15393 1217 aaKnown RBP11.06□□□□□ -0.64
NUP50-214ENST00000469163 TBC1D31Q96DN5 1066 aa11.06□□□□□ -0.64
NUP50-214ENST00000469163 BRIP1Q9BX63 1249 aa11.06□□□□□ -0.64
NUP50-214ENST00000469163 DNAJC25Q9H1X3 360 aa11.06□□□□□ -0.64
NUP50-214ENST00000469163 GPCPD1Q9NPB8 672 aa11.06□□□□□ -0.64
NUP50-214ENST00000469163 SPATA7Q9P0W8 599 aa11.06□□□□□ -0.64
NUP50-214ENST00000469163 KCNJ14Q9UNX9 436 aa11.06□□□□□ -0.64
NUP50-214ENST00000469163 MAP2K7O14733 419 aa11.06□□□□□ -0.64
NUP50-214ENST00000469163 SRGNP10124 158 aa11.06□□□□□ -0.64
NUP50-214ENST00000469163 GNAT1P11488 350 aa11.06□□□□□ -0.64
NUP50-214ENST00000469163 SYT1P21579 422 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms