RNA–Protein interactions for RNA: ENST00000469154.5

SMARCD3-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 5

Gene SMARCD3, Length 2,415 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-205ENST00000469154 CRNKL1Q9BZJ0 848 aaKnown RBP16■□□□□ 0.15
SMARCD3-205ENST00000469154 TMX4Q9H1E5 349 aaPredicted RBP16■□□□□ 0.15
SMARCD3-205ENST00000469154 CTAGE9A4FU28 777 aa16■□□□□ 0.15
SMARCD3-205ENST00000469154 LONP1P36776 959 aaKnown RBP16■□□□□ 0.15
SMARCD3-205ENST00000469154 CCT6AP40227 531 aaKnown RBP16■□□□□ 0.15
SMARCD3-205ENST00000469154 CYP26C1Q6V0L0 522 aa16■□□□□ 0.15
SMARCD3-205ENST00000469154 BLZF1Q9H2G9 400 aa16■□□□□ 0.15
SMARCD3-205ENST00000469154 ZKSCAN7Q9P0L1 754 aaPredicted RBP16■□□□□ 0.15
SMARCD3-205ENST00000469154 MYO1AQ9UBC5 1043 aa16■□□□□ 0.15
SMARCD3-205ENST00000469154 POLLQ9UGP5 575 aa16■□□□□ 0.15
SMARCD3-205ENST00000469154 MYH1P12882 1939 aa16■□□□□ 0.15
SMARCD3-205ENST00000469154 C6orf229H3BNL8 230 aa15.99■□□□□ 0.15
SMARCD3-205ENST00000469154 OAS2P29728 719 aaKnown RBP15.99■□□□□ 0.15
SMARCD3-205ENST00000469154 ZNF384Q8TF68 577 aa15.99■□□□□ 0.15
SMARCD3-205ENST00000469154 NELFBQ8WX92 580 aa15.99■□□□□ 0.15
SMARCD3-205ENST00000469154 STAMQ92783 540 aa15.99■□□□□ 0.15
SMARCD3-205ENST00000469154 ABHD10Q9NUJ1 306 aa15.99■□□□□ 0.15
SMARCD3-205ENST00000469154 ARPP21Q9UBL0 812 aaPredicted RBP15.99■□□□□ 0.15
SMARCD3-205ENST00000469154 KCNJ18B7U540 433 aa15.99■□□□□ 0.15
SMARCD3-205ENST00000469154 KCNA3P22001 575 aa15.99■□□□□ 0.15
SMARCD3-205ENST00000469154 ATP2B4P23634 1241 aa15.99■□□□□ 0.15
SMARCD3-205ENST00000469154 HIBADHP31937 336 aaKnown RBP15.99■□□□□ 0.15
SMARCD3-205ENST00000469154 KIF5BP33176 963 aa15.99■□□□□ 0.15
SMARCD3-205ENST00000469154 MCM7P33993 719 aa15.99■□□□□ 0.15
SMARCD3-205ENST00000469154 KCNJ12Q14500 433 aa15.99■□□□□ 0.15
SMARCD3-205ENST00000469154 SMC1AQ14683 1233 aaKnown RBP15.99■□□□□ 0.15
SMARCD3-205ENST00000469154 KIF4BQ2VIQ3 1234 aa15.99■□□□□ 0.15
SMARCD3-205ENST00000469154 TCP11X2Q5H9J9 407 aa15.99■□□□□ 0.15
SMARCD3-205ENST00000469154 TBC1D16Q8TBP0 767 aa15.99■□□□□ 0.15
SMARCD3-205ENST00000469154 NSUN4Q96CB9 384 aaKnown RBP15.99■□□□□ 0.15
SMARCD3-205ENST00000469154 FUT8Q9BYC5 575 aa15.99■□□□□ 0.15
SMARCD3-205ENST00000469154 ATP8A2Q9NTI2 1148 aa15.99■□□□□ 0.15
SMARCD3-205ENST00000469154 CALCOCO1Q9P1Z2 691 aa15.99■□□□□ 0.15
SMARCD3-205ENST00000469154 RPN1P04843 607 aaKnown RBP15.98■□□□□ 0.15
SMARCD3-205ENST00000469154 SBK1Q52WX2 424 aa15.98■□□□□ 0.15
SMARCD3-205ENST00000469154 FBXO33Q7Z6M2 555 aa15.98■□□□□ 0.15
SMARCD3-205ENST00000469154 HNRNPLLQ8WVV9 542 aaKnown RBP15.98■□□□□ 0.15
SMARCD3-205ENST00000469154 SH3GLB2Q9NR46 395 aa15.98■□□□□ 0.15
SMARCD3-205ENST00000469154 SLX4Q8IY92 1834 aa15.98■□□□□ 0.15
SMARCD3-205ENST00000469154 ERICH4A6NGS2 130 aa15.98■□□□□ 0.15
SMARCD3-205ENST00000469154 POLR3GO15318 223 aaPredicted RBP15.98■□□□□ 0.15
SMARCD3-205ENST00000469154 NT5C2P49902 561 aa15.98■□□□□ 0.15
SMARCD3-205ENST00000469154 IL17AQ16552 155 aa15.98■□□□□ 0.15
SMARCD3-205ENST00000469154 LONRF2Q1L5Z9 754 aa15.98■□□□□ 0.15
SMARCD3-205ENST00000469154 DPP8Q6V1X1 898 aaPredicted RBP15.98■□□□□ 0.15
SMARCD3-205ENST00000469154 SLC35F6Q8N357 371 aa15.98■□□□□ 0.15
SMARCD3-205ENST00000469154 TTLL6Q8N841 843 aa15.98■□□□□ 0.15
SMARCD3-205ENST00000469154 MSANTD4Q8NCY6 345 aa15.98■□□□□ 0.15
SMARCD3-205ENST00000469154 NUP88Q99567 741 aaPredicted RBP15.98■□□□□ 0.15
SMARCD3-205ENST00000469154 NAPGQ99747 312 aaPredicted RBP15.98■□□□□ 0.15
SMARCD3-205ENST00000469154 VPS16Q9H269 839 aa15.98■□□□□ 0.15
SMARCD3-205ENST00000469154 DCP1AQ9NPI6 582 aaPredicted RBP15.98■□□□□ 0.15
SMARCD3-205ENST00000469154 TAB2Q9NYJ8 693 aa15.98■□□□□ 0.15
SMARCD3-205ENST00000469154 IRS2Q9Y4H2 1338 aa15.98■□□□□ 0.15
SMARCD3-205ENST00000469154 ERVK-24P63145 666 aa15.97■□□□□ 0.15
SMARCD3-205ENST00000469154 WHAMMP3Q1A5X7 153 aa15.97■□□□□ 0.15
SMARCD3-205ENST00000469154 ACRBPQ8NEB7 543 aa15.97■□□□□ 0.15
SMARCD3-205ENST00000469154 MTRQ99707 1265 aa15.97■□□□□ 0.15
SMARCD3-205ENST00000469154 A0A0U1RQJ8 604 aa15.97■□□□□ 0.15
SMARCD3-205ENST00000469154 H7C1D1 291 aa15.97■□□□□ 0.15
SMARCD3-205ENST00000469154 STAT6P42226 847 aa15.97■□□□□ 0.15
SMARCD3-205ENST00000469154 TGFB2P61812 414 aa15.97■□□□□ 0.15
SMARCD3-205ENST00000469154 MECOMQ03112 1051 aa15.97■□□□□ 0.15
SMARCD3-205ENST00000469154 BLIDQ8IZY5 108 aa15.97■□□□□ 0.15
SMARCD3-205ENST00000469154 ATRIPQ8WXE1 791 aa15.97■□□□□ 0.15
SMARCD3-205ENST00000469154 RAB21Q9UL25 225 aa15.97■□□□□ 0.15
SMARCD3-205ENST00000469154 C21orf2O43822 256 aa15.96■□□□□ 0.15
SMARCD3-205ENST00000469154 NMT2O60551 498 aa15.96■□□□□ 0.15
SMARCD3-205ENST00000469154 ERLIN1O75477 346 aa15.96■□□□□ 0.15
SMARCD3-205ENST00000469154 USP5P45974 858 aa15.96■□□□□ 0.15
SMARCD3-205ENST00000469154 SEMA3FQ13275 785 aa15.96■□□□□ 0.15
SMARCD3-205ENST00000469154 FAM47AQ5JRC9 791 aa15.96■□□□□ 0.15
SMARCD3-205ENST00000469154 WWC2Q6AWC2 1192 aa15.96■□□□□ 0.15
SMARCD3-205ENST00000469154 C7orf43Q8WVR3 580 aa15.96■□□□□ 0.15
SMARCD3-205ENST00000469154 ZSWIM4Q9H7M6 989 aa15.96■□□□□ 0.15
SMARCD3-205ENST00000469154 ANKZF1Q9H8Y5 726 aa15.96■□□□□ 0.15
SMARCD3-205ENST00000469154 SPON1Q9HCB6 807 aa15.96■□□□□ 0.15
SMARCD3-205ENST00000469154 PUF60Q9UHX1 559 aaKnown RBP15.96■□□□□ 0.15
SMARCD3-205ENST00000469154 BAZ2BQ9UIF8 2168 aaKnown RBP15.96■□□□□ 0.15
SMARCD3-205ENST00000469154 LRRC37AA6NMS7 1700 aa15.96■□□□□ 0.15
SMARCD3-205ENST00000469154 TSPY2A6NKD2 308 aa15.96■□□□□ 0.15
SMARCD3-205ENST00000469154 GPS2Q13227 327 aa15.96■□□□□ 0.15
SMARCD3-205ENST00000469154 TXLNBQ8N3L3 684 aa15.96■□□□□ 0.15
SMARCD3-205ENST00000469154 C4orf32Q8N8J7 132 aa15.96■□□□□ 0.15
SMARCD3-205ENST00000469154 PCDHA4Q9UN74 947 aa15.96■□□□□ 0.15
SMARCD3-205ENST00000469154 MAP2K7O14733 419 aa15.95■□□□□ 0.14
SMARCD3-205ENST00000469154 RIMBP2O15034 1052 aa15.95■□□□□ 0.14
SMARCD3-205ENST00000469154 COBLO75128 1261 aa15.95■□□□□ 0.14
SMARCD3-205ENST00000469154 ARHGAP25P42331 645 aa15.95■□□□□ 0.14
SMARCD3-205ENST00000469154 KAT14Q9H8E8 782 aa15.95■□□□□ 0.14
SMARCD3-205ENST00000469154 DISC1Q9NRI5 854 aa15.95■□□□□ 0.14
SMARCD3-205ENST00000469154 MYL1P05976 194 aa15.95■□□□□ 0.14
SMARCD3-205ENST00000469154 KRT9P35527 623 aa15.95■□□□□ 0.14
SMARCD3-205ENST00000469154 UBXN1Q04323 297 aa15.95■□□□□ 0.14
SMARCD3-205ENST00000469154 KCNB1Q14721 858 aa15.95■□□□□ 0.14
SMARCD3-205ENST00000469154 MSL3Q8N5Y2 521 aaKnown RBP15.95■□□□□ 0.14
SMARCD3-205ENST00000469154 GDAQ9Y2T3 454 aa15.95■□□□□ 0.14
SMARCD3-205ENST00000469154 CTAGE15A4D2H0 777 aa15.94■□□□□ 0.14
SMARCD3-205ENST00000469154 TUBBP07437 444 aa15.94■□□□□ 0.14
SMARCD3-205ENST00000469154 CTAGE8P0CG41 777 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms