RNA–Protein interactions for RNA: ENST00000468996.2

TGFBR3-205, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 4

Gene TGFBR3, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-205ENST00000468996 ZNF213O14771 459 aa12.55□□□□□ -0.4
TGFBR3-205ENST00000468996 TOP1P11387 765 aaKnown RBP12.55□□□□□ -0.4
TGFBR3-205ENST00000468996 AKR1A1P14550 325 aa12.55□□□□□ -0.4
TGFBR3-205ENST00000468996 SLC16A2P36021 539 aa12.55□□□□□ -0.4
TGFBR3-205ENST00000468996 CNTN2Q02246 1040 aa12.55□□□□□ -0.4
TGFBR3-205ENST00000468996 TTBK2Q6IQ55 1244 aa12.55□□□□□ -0.4
TGFBR3-205ENST00000468996 RASGRP2Q7LDG7 609 aa12.55□□□□□ -0.4
TGFBR3-205ENST00000468996 MSL3Q8N5Y2 521 aaKnown RBP12.55□□□□□ -0.4
TGFBR3-205ENST00000468996 LRCH3Q96II8 777 aa12.55□□□□□ -0.4
TGFBR3-205ENST00000468996 TRERF1Q96PN7 1200 aa12.55□□□□□ -0.4
TGFBR3-205ENST00000468996 TMEM47Q9BQJ4 181 aa12.55□□□□□ -0.4
TGFBR3-205ENST00000468996 OSBPL3Q9H4L5 887 aa12.55□□□□□ -0.4
TGFBR3-205ENST00000468996 GPCPD1Q9NPB8 672 aa12.55□□□□□ -0.4
TGFBR3-205ENST00000468996 PRDM5Q9NQX1 630 aaPredicted RBP12.55□□□□□ -0.4
TGFBR3-205ENST00000468996 RNF146Q9NTX7 359 aa12.55□□□□□ -0.4
TGFBR3-205ENST00000468996 PRR12Q9ULL5 1215 aa12.55□□□□□ -0.4
TGFBR3-205ENST00000468996 GREB1LQ9C091 1923 aaPredicted RBP12.54□□□□□ -0.4
TGFBR3-205ENST00000468996 COL11A1P12107 1806 aaPredicted RBP12.54□□□□□ -0.4
TGFBR3-205ENST00000468996 PLA2G6O60733 806 aa12.54□□□□□ -0.4
TGFBR3-205ENST00000468996 ACVR2BQ13705 512 aa12.54□□□□□ -0.4
TGFBR3-205ENST00000468996 AKNAD1Q5T1N1 836 aa12.54□□□□□ -0.4
TGFBR3-205ENST00000468996 MAMDC4Q6UXC1 1216 aa12.54□□□□□ -0.4
TGFBR3-205ENST00000468996 DCAF4Q8WV16 495 aa12.54□□□□□ -0.4
TGFBR3-205ENST00000468996 ZKSCAN3Q9BRR0 538 aa12.54□□□□□ -0.4
TGFBR3-205ENST00000468996 RNF41Q9H4P4 317 aaPredicted RBP12.54□□□□□ -0.4
TGFBR3-205ENST00000468996 ACAD9Q9H845 621 aa12.54□□□□□ -0.4
TGFBR3-205ENST00000468996 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.54□□□□□ -0.4
TGFBR3-205ENST00000468996 ZNF536O15090 1300 aa12.54□□□□□ -0.4
TGFBR3-205ENST00000468996 FRMPD2Q68DX3 1309 aaPredicted RBP12.54□□□□□ -0.4
TGFBR3-205ENST00000468996 SYNGAP1Q96PV0 1343 aa12.54□□□□□ -0.4
TGFBR3-205ENST00000468996 ZNFX1Q9P2E3 1918 aaKnown RBP12.54□□□□□ -0.4
TGFBR3-205ENST00000468996 HIP1O00291 1037 aa12.53□□□□□ -0.4
TGFBR3-205ENST00000468996 TRIM60Q495X7 471 aa12.53□□□□□ -0.4
TGFBR3-205ENST00000468996 NSMFQ6X4W1 530 aa12.53□□□□□ -0.4
TGFBR3-205ENST00000468996 NOL8Q76FK4 1167 aaKnown RBP12.53□□□□□ -0.4
TGFBR3-205ENST00000468996 ARMCX2Q7L311 632 aa12.53□□□□□ -0.4
TGFBR3-205ENST00000468996 ZNF467Q7Z7K2 595 aaPredicted RBP12.53□□□□□ -0.4
TGFBR3-205ENST00000468996 TBC1D10CQ8IV04 446 aa12.53□□□□□ -0.4
TGFBR3-205ENST00000468996 CCDC144CPQ8IYA2 1237 aa12.53□□□□□ -0.4
TGFBR3-205ENST00000468996 TDHQ8IZJ6 230 aa12.53□□□□□ -0.4
TGFBR3-205ENST00000468996 VTI1AQ96AJ9 217 aa12.53□□□□□ -0.4
TGFBR3-205ENST00000468996 ABHD16BQ9H3Z7 469 aa12.53□□□□□ -0.4
TGFBR3-205ENST00000468996 A1CFQ9NQ94 594 aaKnown RBP12.53□□□□□ -0.4
TGFBR3-205ENST00000468996 TCP11L1Q9NUJ3 509 aa12.53□□□□□ -0.4
TGFBR3-205ENST00000468996 CCPG1Q9ULG6 757 aa12.53□□□□□ -0.4
TGFBR3-205ENST00000468996 PARP14Q460N5 1801 aa12.53□□□□□ -0.4
TGFBR3-205ENST00000468996 ZNF236Q9UL36 1845 aa12.53□□□□□ -0.4
TGFBR3-205ENST00000468996 ALPK3Q96L96 1907 aa12.52□□□□□ -0.4
TGFBR3-205ENST00000468996 MYH4Q9Y623 1939 aa12.52□□□□□ -0.4
TGFBR3-205ENST00000468996 NOVP48745 357 aa12.52□□□□□ -0.41
TGFBR3-205ENST00000468996 TLE2Q04725 743 aa12.52□□□□□ -0.41
TGFBR3-205ENST00000468996 KCNA10Q16322 511 aa12.52□□□□□ -0.41
TGFBR3-205ENST00000468996 TKFCQ3LXA3 575 aa12.52□□□□□ -0.41
TGFBR3-205ENST00000468996 CCDC144BQ3MJ40 725 aa12.52□□□□□ -0.41
TGFBR3-205ENST00000468996 MUM1L1Q5H9M0 696 aa12.52□□□□□ -0.41
TGFBR3-205ENST00000468996 SYDE2Q5VT97 1194 aa12.52□□□□□ -0.41
TGFBR3-205ENST00000468996 ESR2Q92731 530 aa12.52□□□□□ -0.41
TGFBR3-205ENST00000468996 TTC14Q96N46 770 aa12.52□□□□□ -0.41
TGFBR3-205ENST00000468996 PHF24Q9UPV7 400 aa12.52□□□□□ -0.41
TGFBR3-205ENST00000468996 SMCHD1A6NHR9 2005 aa12.51□□□□□ -0.41
TGFBR3-205ENST00000468996 A0A1W2PQ45 241 aaPredicted RBP12.51□□□□□ -0.41
TGFBR3-205ENST00000468996 A0A1W2PQY0 241 aa12.51□□□□□ -0.41
TGFBR3-205ENST00000468996 SOWAHBA6NEL2 793 aa12.51□□□□□ -0.41
TGFBR3-205ENST00000468996 DUSP11O75319 330 aaKnown RBP12.51□□□□□ -0.41
TGFBR3-205ENST00000468996 ICAM1P05362 532 aa12.51□□□□□ -0.41
TGFBR3-205ENST00000468996 C6orf222P0C671 652 aaPredicted RBP12.51□□□□□ -0.41
TGFBR3-205ENST00000468996 PCP11498 1178 aaKnown RBP12.51□□□□□ -0.41
TGFBR3-205ENST00000468996 IRX5P78411 483 aaPredicted RBP12.51□□□□□ -0.41
TGFBR3-205ENST00000468996 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.51□□□□□ -0.41
TGFBR3-205ENST00000468996 SH3RF1Q7Z6J0 888 aa12.51□□□□□ -0.41
TGFBR3-205ENST00000468996 FAM133AQ8N9E0 248 aa12.51□□□□□ -0.41
TGFBR3-205ENST00000468996 FGD4Q96M96 766 aa12.51□□□□□ -0.41
TGFBR3-205ENST00000468996 PURBQ96QR8 312 aaKnown RBP12.51□□□□□ -0.41
TGFBR3-205ENST00000468996 SPC25Q9HBM1 224 aa12.51□□□□□ -0.41
TGFBR3-205ENST00000468996 DDX49Q9Y6V7 483 aaKnown RBP12.51□□□□□ -0.41
TGFBR3-205ENST00000468996 ZMYM6O95789 1325 aa12.51□□□□□ -0.41
TGFBR3-205ENST00000468996 ASB14A6NK59 587 aa12.5□□□□□ -0.41
TGFBR3-205ENST00000468996 PQBP1O60828 265 aaKnown RBP12.5□□□□□ -0.41
TGFBR3-205ENST00000468996 KDM4AO75164 1064 aa12.5□□□□□ -0.41
TGFBR3-205ENST00000468996 ADAMTS4O75173 837 aa12.5□□□□□ -0.41
TGFBR3-205ENST00000468996 GOLGA8HP0CJ92 632 aa12.5□□□□□ -0.41
TGFBR3-205ENST00000468996 PDHBP11177 359 aa12.5□□□□□ -0.41
TGFBR3-205ENST00000468996 PDE4AP27815 886 aa12.5□□□□□ -0.41
TGFBR3-205ENST00000468996 ACLYP53396 1101 aa12.5□□□□□ -0.41
TGFBR3-205ENST00000468996 TNFAIP2Q03169 654 aa12.5□□□□□ -0.41
TGFBR3-205ENST00000468996 BAATQ14032 418 aaPredicted RBP12.5□□□□□ -0.41
TGFBR3-205ENST00000468996 IMMTQ16891 758 aaKnown RBP12.5□□□□□ -0.41
TGFBR3-205ENST00000468996 GNASQ5JWF2 1037 aa12.5□□□□□ -0.41
TGFBR3-205ENST00000468996 BTNL9Q6UXG8 535 aa12.5□□□□□ -0.41
TGFBR3-205ENST00000468996 EEPD1Q7L9B9 569 aa12.5□□□□□ -0.41
TGFBR3-205ENST00000468996 NUP133Q8WUM0 1156 aa12.5□□□□□ -0.41
TGFBR3-205ENST00000468996 BADQ92934 168 aa12.5□□□□□ -0.41
TGFBR3-205ENST00000468996 TSEN34Q9BSV6 310 aaKnown RBP12.5□□□□□ -0.41
TGFBR3-205ENST00000468996 STARD7Q9NQZ5 370 aa12.5□□□□□ -0.41
TGFBR3-205ENST00000468996 CTNNA3Q9UI47 895 aa12.5□□□□□ -0.41
TGFBR3-205ENST00000468996 NEDD4P46934 1319 aa12.5□□□□□ -0.41
TGFBR3-205ENST00000468996 SYNRGQ9UMZ2 1314 aa12.5□□□□□ -0.41
TGFBR3-205ENST00000468996 SZT2Q5T011 3432 aa12.5□□□□□ -0.41
TGFBR3-205ENST00000468996 PTPDC1A2A3K4 754 aa12.49□□□□□ -0.41
TGFBR3-205ENST00000468996 TRIM43BA6NCK2 446 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms