RNA–Protein interactions for RNA: ENST00000467898.3

LCA5-203, Transcript of LCA5, lebercilin, humanhuman

TSL 5 BASIC

Gene LCA5, Length 2,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-203ENST00000467898 LMNTD2Q8IXW0 634 aa10.25□□□□□ -0.77
LCA5-203ENST00000467898 CABLES1Q8TDN4 633 aa10.25□□□□□ -0.77
LCA5-203ENST00000467898 NDNQ99608 321 aa10.25□□□□□ -0.77
LCA5-203ENST00000467898 RABEP2Q9H5N1 569 aa10.25□□□□□ -0.77
LCA5-203ENST00000467898 UBAP1Q9NZ09 502 aa10.25□□□□□ -0.77
LCA5-203ENST00000467898 CTNNAL1Q9UBT7 734 aa10.25□□□□□ -0.77
LCA5-203ENST00000467898 NHSL1Q5SYE7 1610 aa10.25□□□□□ -0.77
LCA5-203ENST00000467898 DPPA5A6NC42 116 aa10.24□□□□□ -0.77
LCA5-203ENST00000467898 WDR46O15213 610 aaKnown RBP10.24□□□□□ -0.77
LCA5-203ENST00000467898 GSTA1P08263 222 aa10.24□□□□□ -0.77
LCA5-203ENST00000467898 NAA16Q6N069 864 aaPredicted RBP10.24□□□□□ -0.77
LCA5-203ENST00000467898 MAMSTRQ6ZN01 415 aa10.24□□□□□ -0.77
LCA5-203ENST00000467898 TTC6Q86TZ1 520 aa10.24□□□□□ -0.77
LCA5-203ENST00000467898 HOOK3Q86VS8 718 aa10.24□□□□□ -0.77
LCA5-203ENST00000467898 NSUN7Q8NE18 718 aaKnown RBP10.24□□□□□ -0.77
LCA5-203ENST00000467898 OTUD7AQ8TE49 926 aaPredicted RBP10.24□□□□□ -0.77
LCA5-203ENST00000467898 USP33Q8TEY7 942 aa10.24□□□□□ -0.77
LCA5-203ENST00000467898 DDX21Q9NR30 783 aaKnown RBP eCLIP10.24□□□□□ -0.77
LCA5-203ENST00000467898 SHANK3Q9BYB0 1731 aa10.24□□□□□ -0.77
LCA5-203ENST00000467898 HOXD12P35452 270 aa10.24□□□□□ -0.77
LCA5-203ENST00000467898 PDE6BP35913 854 aa10.24□□□□□ -0.77
LCA5-203ENST00000467898 TEFQ10587 303 aa10.24□□□□□ -0.77
LCA5-203ENST00000467898 INAQ16352 499 aa10.24□□□□□ -0.77
LCA5-203ENST00000467898 C1orf141Q5JVX7 400 aa10.24□□□□□ -0.77
LCA5-203ENST00000467898 ARHGAP18Q8N392 663 aa10.24□□□□□ -0.77
LCA5-203ENST00000467898 CCDC148Q8NFR7 591 aa10.24□□□□□ -0.77
LCA5-203ENST00000467898 CCDC12Q8WUD4 166 aaPredicted RBP10.24□□□□□ -0.77
LCA5-203ENST00000467898 FAM192AQ9GZU8 254 aa10.24□□□□□ -0.77
LCA5-203ENST00000467898 USP44Q9H0E7 712 aa10.24□□□□□ -0.77
LCA5-203ENST00000467898 CHPF2Q9P2E5 772 aa10.24□□□□□ -0.77
LCA5-203ENST00000467898 TTLL3Q9Y4R7 772 aa10.24□□□□□ -0.77
LCA5-203ENST00000467898 GOLGA6L10A0A0M3HER8 536 aa10.24□□□□□ -0.77
LCA5-203ENST00000467898 AGPSO00116 658 aa10.24□□□□□ -0.77
LCA5-203ENST00000467898 PFKFB2O60825 505 aa10.24□□□□□ -0.77
LCA5-203ENST00000467898 GNAI2P04899 355 aa10.24□□□□□ -0.77
LCA5-203ENST00000467898 SSBP05455 408 aaKnown RBP eCLIP10.24□□□□□ -0.77
LCA5-203ENST00000467898 MSL3P1P0C860 447 aa10.24□□□□□ -0.77
LCA5-203ENST00000467898 TOP1P11387 765 aaKnown RBP10.24□□□□□ -0.77
LCA5-203ENST00000467898 CA8P35219 290 aa10.24□□□□□ -0.77
LCA5-203ENST00000467898 SCTRP47872 440 aa10.24□□□□□ -0.77
LCA5-203ENST00000467898 MAP7D1Q3KQU3 841 aa10.24□□□□□ -0.77
LCA5-203ENST00000467898 PI16Q6UXB8 463 aa10.24□□□□□ -0.77
LCA5-203ENST00000467898 NANOGNBQ7Z5D8 188 aa10.24□□□□□ -0.77
LCA5-203ENST00000467898 KRI1Q8N9T8 703 aaKnown RBP10.24□□□□□ -0.77
LCA5-203ENST00000467898 SREK1Q8WXA9 508 aaKnown RBP10.24□□□□□ -0.77
LCA5-203ENST00000467898 ZMAT2Q96NC0 199 aaKnown RBP10.24□□□□□ -0.77
LCA5-203ENST00000467898 OSBPL10Q9BXB5 764 aa10.24□□□□□ -0.77
LCA5-203ENST00000467898 VCXQ9H320 206 aa10.24□□□□□ -0.77
LCA5-203ENST00000467898 HOXC10Q9NYD6 342 aa10.24□□□□□ -0.77
LCA5-203ENST00000467898 MTMR6Q9Y217 621 aa10.24□□□□□ -0.77
LCA5-203ENST00000467898 ADCY9O60503 1353 aa10.24□□□□□ -0.77
LCA5-203ENST00000467898 SALL3Q9BXA9 1300 aa10.23□□□□□ -0.77
LCA5-203ENST00000467898 TMEM247A6NEH6 219 aa10.23□□□□□ -0.77
LCA5-203ENST00000467898 GFPT2O94808 682 aa10.23□□□□□ -0.77
LCA5-203ENST00000467898 AKAP17AQ02040 695 aaKnown RBP10.23□□□□□ -0.77
LCA5-203ENST00000467898 KDM7AQ6ZMT4 941 aa10.23□□□□□ -0.77
LCA5-203ENST00000467898 C11orf57Q6ZUT1 292 aaPredicted RBP10.23□□□□□ -0.77
LCA5-203ENST00000467898 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.23□□□□□ -0.77
LCA5-203ENST00000467898 KIFAP3Q92845 792 aa10.23□□□□□ -0.77
LCA5-203ENST00000467898 HVCN1Q96D96 273 aa10.23□□□□□ -0.77
LCA5-203ENST00000467898 BAIAP2L1Q9UHR4 511 aa10.23□□□□□ -0.77
LCA5-203ENST00000467898 ATP6V0A2Q9Y487 856 aa10.23□□□□□ -0.77
LCA5-203ENST00000467898 PNMA6EA0A0J9YXQ4 647 aa10.23□□□□□ -0.77
LCA5-203ENST00000467898 USO1O60763 962 aaKnown RBP10.23□□□□□ -0.77
LCA5-203ENST00000467898 PFDN1O60925 122 aa10.23□□□□□ -0.77
LCA5-203ENST00000467898 GIGYF1O75420 1035 aaPredicted RBP10.23□□□□□ -0.77
LCA5-203ENST00000467898 SDSP20132 328 aa10.23□□□□□ -0.77
LCA5-203ENST00000467898 LSP1P33241 339 aa10.23□□□□□ -0.77
LCA5-203ENST00000467898 ABL2P42684 1182 aa10.23□□□□□ -0.77
LCA5-203ENST00000467898 ATP8B2P98198 1209 aa10.23□□□□□ -0.77
LCA5-203ENST00000467898 ALS2CLQ60I27 953 aa10.23□□□□□ -0.77
LCA5-203ENST00000467898 EHBP1Q8NDI1 1231 aa10.23□□□□□ -0.77
LCA5-203ENST00000467898 TAOK3Q9H2K8 898 aa10.23□□□□□ -0.77
LCA5-203ENST00000467898 L3MBTL1Q9Y468 752 aa10.23□□□□□ -0.77
LCA5-203ENST00000467898 SOS2Q07890 1332 aaPredicted RBP10.22□□□□□ -0.77
LCA5-203ENST00000467898 ZNF335Q9H4Z2 1342 aaPredicted RBP10.22□□□□□ -0.77
LCA5-203ENST00000467898 A0A1B0GVL5 298 aa10.22□□□□□ -0.77
LCA5-203ENST00000467898 PRAMEF22A3QJZ6 481 aa10.22□□□□□ -0.77
LCA5-203ENST00000467898 STX10O60499 249 aa10.22□□□□□ -0.77
LCA5-203ENST00000467898 MTRF1O75570 445 aaKnown RBP10.22□□□□□ -0.77
LCA5-203ENST00000467898 PHKG2P15735 406 aa10.22□□□□□ -0.77
LCA5-203ENST00000467898 MLH1P40692 756 aa10.22□□□□□ -0.77
LCA5-203ENST00000467898 CD97P48960 835 aa10.22□□□□□ -0.77
LCA5-203ENST00000467898 PTK7Q13308 1070 aa10.22□□□□□ -0.77
LCA5-203ENST00000467898 ME3Q16798 604 aa10.22□□□□□ -0.77
LCA5-203ENST00000467898 ZMYM1Q5SVZ6 1142 aa10.22□□□□□ -0.77
LCA5-203ENST00000467898 CCDC70Q6NSX1 233 aa10.22□□□□□ -0.77
LCA5-203ENST00000467898 Q6ZUG5 572 aa10.22□□□□□ -0.77
LCA5-203ENST00000467898 ZNF365Q70YC5 407 aa10.22□□□□□ -0.77
LCA5-203ENST00000467898 C1orf131Q8NDD1 294 aaKnown RBP10.22□□□□□ -0.77
LCA5-203ENST00000467898 MYCBPAPQ8TBZ2 947 aa10.22□□□□□ -0.77
LCA5-203ENST00000467898 EIF2AQ9BY44 585 aaKnown RBP10.22□□□□□ -0.77
LCA5-203ENST00000467898 UPF3BQ9BZI7 483 aaKnown RBP10.22□□□□□ -0.77
LCA5-203ENST00000467898 JADE2Q9NQC1 790 aa10.22□□□□□ -0.77
LCA5-203ENST00000467898 PUF60Q9UHX1 559 aaKnown RBP10.22□□□□□ -0.77
LCA5-203ENST00000467898 SPO11Q9Y5K1 396 aa10.22□□□□□ -0.77
LCA5-203ENST00000467898 TMEM110-MUSTN1A8MSY1 372 aa10.22□□□□□ -0.77
LCA5-203ENST00000467898 EIF2S2P20042 333 aaKnown RBP10.22□□□□□ -0.77
LCA5-203ENST00000467898 TCF7P36402 384 aaPredicted RBP10.22□□□□□ -0.77
LCA5-203ENST00000467898 APBA1Q02410 837 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms