RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 UBASH3BQ8TF42 649 aa7.2□□□□□ -1.26
PTCD3-207ENST00000467273 TUT1Q9H6E5 874 aaKnown RBP7.2□□□□□ -1.26
PTCD3-207ENST00000467273 PANK3Q9H999 370 aa7.2□□□□□ -1.26
PTCD3-207ENST00000467273 DDX60Q8IY21 1712 aaKnown RBP7.2□□□□□ -1.26
PTCD3-207ENST00000467273 ZNF609O15014 1411 aa7.19□□□□□ -1.26
PTCD3-207ENST00000467273 ANKRD36CQ5JPF3 1778 aa7.19□□□□□ -1.26
PTCD3-207ENST00000467273 FAM177BA6PVY3 158 aa7.19□□□□□ -1.26
PTCD3-207ENST00000467273 RAD17O75943 681 aa7.19□□□□□ -1.26
PTCD3-207ENST00000467273 BMP3P12645 472 aa7.19□□□□□ -1.26
PTCD3-207ENST00000467273 HOXD8P13378 290 aaPredicted RBP7.19□□□□□ -1.26
PTCD3-207ENST00000467273 ATP11AP98196 1134 aa7.19□□□□□ -1.26
PTCD3-207ENST00000467273 HLFQ16534 295 aa7.19□□□□□ -1.26
PTCD3-207ENST00000467273 CEP135Q66GS9 1140 aa7.19□□□□□ -1.26
PTCD3-207ENST00000467273 PPP1R42Q7Z4L9 355 aa7.19□□□□□ -1.26
PTCD3-207ENST00000467273 GLYCTKQ8IVS8 523 aa7.19□□□□□ -1.26
PTCD3-207ENST00000467273 COL26A1Q96A83 441 aa7.19□□□□□ -1.26
PTCD3-207ENST00000467273 FAM83CQ9BQN1 747 aa7.19□□□□□ -1.26
PTCD3-207ENST00000467273 KNSTRNQ9Y448 316 aa7.19□□□□□ -1.26
PTCD3-207ENST00000467273 KCNMB2Q9Y691 235 aa7.19□□□□□ -1.26
PTCD3-207ENST00000467273 BRCA2P51587 3418 aa7.19□□□□□ -1.26
PTCD3-207ENST00000467273 MAP3K15Q6ZN16 1313 aa7.19□□□□□ -1.26
PTCD3-207ENST00000467273 CUL9Q8IWT3 2517 aa7.19□□□□□ -1.26
PTCD3-207ENST00000467273 POLR2AP24928 1970 aaKnown RBP7.19□□□□□ -1.26
PTCD3-207ENST00000467273 LRRC37AA6NMS7 1700 aa7.18□□□□□ -1.26
PTCD3-207ENST00000467273 DDX3YO15523 660 aaKnown RBP7.18□□□□□ -1.26
PTCD3-207ENST00000467273 FKTNO75072 461 aa7.18□□□□□ -1.26
PTCD3-207ENST00000467273 NTSR2O95665 410 aa7.18□□□□□ -1.26
PTCD3-207ENST00000467273 C8AP07357 584 aa7.18□□□□□ -1.26
PTCD3-207ENST00000467273 CDC27P30260 824 aa7.18□□□□□ -1.26
PTCD3-207ENST00000467273 RBM25P49756 843 aaKnown RBP7.18□□□□□ -1.26
PTCD3-207ENST00000467273 SREBF2Q12772 1141 aa7.18□□□□□ -1.26
PTCD3-207ENST00000467273 ECM1Q16610 540 aa7.18□□□□□ -1.26
PTCD3-207ENST00000467273 PARP10Q53GL7 1025 aa7.18□□□□□ -1.26
PTCD3-207ENST00000467273 SLC10A5Q5PT55 438 aa7.18□□□□□ -1.26
PTCD3-207ENST00000467273 FAM117BQ6P1L5 589 aa7.18□□□□□ -1.26
PTCD3-207ENST00000467273 DNAJC14Q6Y2X3 702 aaPredicted RBP7.18□□□□□ -1.26
PTCD3-207ENST00000467273 MYO19Q96H55 970 aa7.18□□□□□ -1.26
PTCD3-207ENST00000467273 MFSD14AQ96MC6 490 aa7.18□□□□□ -1.26
PTCD3-207ENST00000467273 PITPNM2Q9BZ72 1349 aa7.18□□□□□ -1.26
PTCD3-207ENST00000467273 PRAMEF22A3QJZ6 481 aa7.17□□□□□ -1.26
PTCD3-207ENST00000467273 YDJCA8MPS7 323 aa7.17□□□□□ -1.26
PTCD3-207ENST00000467273 ADM5C9JUS6 153 aa7.17□□□□□ -1.26
PTCD3-207ENST00000467273 FSCN2O14926 492 aa7.17□□□□□ -1.26
PTCD3-207ENST00000467273 SMNDC1O75940 238 aaKnown RBP eCLIP7.17□□□□□ -1.26
PTCD3-207ENST00000467273 PIP4K2AP48426 406 aaPredicted RBP7.17□□□□□ -1.26
PTCD3-207ENST00000467273 TBC1D10BQ4KMP7 808 aaPredicted RBP7.17□□□□□ -1.26
PTCD3-207ENST00000467273 KIF6Q6ZMV9 814 aa7.17□□□□□ -1.26
PTCD3-207ENST00000467273 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.17□□□□□ -1.26
PTCD3-207ENST00000467273 ZNF34Q8IZ26 560 aa7.17□□□□□ -1.26
PTCD3-207ENST00000467273 CDCA5Q96FF9 252 aa7.17□□□□□ -1.26
PTCD3-207ENST00000467273 SPACA7Q96KW9 195 aa7.17□□□□□ -1.26
PTCD3-207ENST00000467273 SAP130Q9H0E3 1048 aa7.17□□□□□ -1.26
PTCD3-207ENST00000467273 LRFN2Q9ULH4 789 aa7.17□□□□□ -1.26
PTCD3-207ENST00000467273 ABCC4O15439 1325 aa7.17□□□□□ -1.26
PTCD3-207ENST00000467273 RANBP2P49792 3224 aaKnown RBP7.17□□□□□ -1.26
PTCD3-207ENST00000467273 DUOX1Q9NRD9 1551 aa7.16□□□□□ -1.26
PTCD3-207ENST00000467273 COL6A3P12111 3177 aa7.16□□□□□ -1.26
PTCD3-207ENST00000467273 PSMD14O00487 310 aa7.16□□□□□ -1.26
PTCD3-207ENST00000467273 KCNQ3O43525 872 aa7.16□□□□□ -1.26
PTCD3-207ENST00000467273 HTATSF1O43719 755 aaKnown RBP7.16□□□□□ -1.26
PTCD3-207ENST00000467273 TBC1D8O95759 1140 aa7.16□□□□□ -1.26
PTCD3-207ENST00000467273 PREPP48147 710 aa7.16□□□□□ -1.26
PTCD3-207ENST00000467273 INHBEP58166 350 aa7.16□□□□□ -1.26
PTCD3-207ENST00000467273 KIF4BQ2VIQ3 1234 aa7.16□□□□□ -1.26
PTCD3-207ENST00000467273 SUSD4Q5VX71 490 aa7.16□□□□□ -1.26
PTCD3-207ENST00000467273 KLHL23Q8NBE8 558 aa7.16□□□□□ -1.26
PTCD3-207ENST00000467273 SLC17A8Q8NDX2 589 aa7.16□□□□□ -1.26
PTCD3-207ENST00000467273 ARMC5Q96C12 935 aa7.16□□□□□ -1.26
PTCD3-207ENST00000467273 GGA3Q9NZ52 723 aa7.16□□□□□ -1.26
PTCD3-207ENST00000467273 UBN2Q6ZU65 1347 aa7.16□□□□□ -1.26
PTCD3-207ENST00000467273 LAMB1P07942 1786 aa7.15□□□□□ -1.26
PTCD3-207ENST00000467273 SHTN1A0MZ66 631 aa7.15□□□□□ -1.26
PTCD3-207ENST00000467273 TCERG1O14776 1098 aaKnown RBP7.15□□□□□ -1.26
PTCD3-207ENST00000467273 ADAM11O75078 769 aa7.15□□□□□ -1.26
PTCD3-207ENST00000467273 HSP90B1P14625 803 aaKnown RBP7.15□□□□□ -1.26
PTCD3-207ENST00000467273 GRAPQ13588 217 aa7.15□□□□□ -1.26
PTCD3-207ENST00000467273 TRIP4Q15650 581 aaPredicted RBP7.15□□□□□ -1.26
PTCD3-207ENST00000467273 ANKRD34AQ69YU3 496 aa7.15□□□□□ -1.26
PTCD3-207ENST00000467273 DDX46Q7L014 1031 aaKnown RBP7.15□□□□□ -1.26
PTCD3-207ENST00000467273 FBXL6Q8N531 539 aa7.15□□□□□ -1.26
PTCD3-207ENST00000467273 GIMAP7Q8NHV1 300 aa7.15□□□□□ -1.26
PTCD3-207ENST00000467273 GRAPLQ8TC17 118 aaPredicted RBP7.15□□□□□ -1.26
PTCD3-207ENST00000467273 HELQQ8TDG4 1101 aa7.15□□□□□ -1.26
PTCD3-207ENST00000467273 RTF1Q92541 710 aaKnown RBP7.15□□□□□ -1.26
PTCD3-207ENST00000467273 ASIC4Q96FT7 647 aa7.15□□□□□ -1.26
PTCD3-207ENST00000467273 POLR3GLQ9BT43 218 aa7.15□□□□□ -1.26
PTCD3-207ENST00000467273 LEMD3Q9Y2U8 911 aa7.15□□□□□ -1.26
PTCD3-207ENST00000467273 COL3A1P02461 1466 aaPredicted RBP7.15□□□□□ -1.27
PTCD3-207ENST00000467273 LAMB2P55268 1798 aa7.15□□□□□ -1.27
PTCD3-207ENST00000467273 CEP290O15078 2479 aa7.14□□□□□ -1.27
PTCD3-207ENST00000467273 GAS2O43903 313 aaKnown RBP7.14□□□□□ -1.27
PTCD3-207ENST00000467273 IGSF3O75054 1194 aa7.14□□□□□ -1.27
PTCD3-207ENST00000467273 VIL1P09327 827 aaKnown RBP7.14□□□□□ -1.27
PTCD3-207ENST00000467273 EPHA1P21709 976 aa7.14□□□□□ -1.27
PTCD3-207ENST00000467273 ZNF280AP59817 542 aaPredicted RBP7.14□□□□□ -1.27
PTCD3-207ENST00000467273 ARHGAP4P98171 946 aa7.14□□□□□ -1.27
PTCD3-207ENST00000467273 HYAL2Q12891 473 aa7.14□□□□□ -1.27
PTCD3-207ENST00000467273 C16orf46Q6P387 395 aa7.14□□□□□ -1.27
PTCD3-207ENST00000467273 FDX2Q6P4F2 183 aa7.14□□□□□ -1.27
PTCD3-207ENST00000467273 DLK2Q6UY11 383 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms