RNA–Protein interactions for RNA: ENST00000466032.1

CHMP3-206, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 436 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-206ENST00000466032 GMCL1Q96IK5 515 aa6.97□□□□□ -1.29
CHMP3-206ENST00000466032 TCEANC2Q96MN5 208 aa6.97□□□□□ -1.29
CHMP3-206ENST00000466032 TMEM47Q9BQJ4 181 aa6.97□□□□□ -1.29
CHMP3-206ENST00000466032 MAF1Q9H063 256 aa6.97□□□□□ -1.29
CHMP3-206ENST00000466032 GLT8D2Q9H1C3 349 aa6.97□□□□□ -1.29
CHMP3-206ENST00000466032 PICK1Q9NRD5 415 aa6.97□□□□□ -1.29
CHMP3-206ENST00000466032 IL17RBQ9NRM6 502 aa6.97□□□□□ -1.29
CHMP3-206ENST00000466032 TMX2Q9Y320 296 aa6.97□□□□□ -1.29
CHMP3-206ENST00000466032 PCDHAC2Q9Y5I4 1007 aa6.97□□□□□ -1.29
CHMP3-206ENST00000466032 CSADQ9Y600 493 aa6.97□□□□□ -1.29
CHMP3-206ENST00000466032 WDR33Q9C0J8 1336 aaKnown RBP6.97□□□□□ -1.29
CHMP3-206ENST00000466032 MYH8P13535 1937 aa6.96□□□□□ -1.3
CHMP3-206ENST00000466032 GOLGB1Q14789 3259 aaKnown RBP6.96□□□□□ -1.3
CHMP3-206ENST00000466032 PRPF3O43395 683 aaKnown RBP6.96□□□□□ -1.3
CHMP3-206ENST00000466032 SNHG28P0DPA3 235 aa6.96□□□□□ -1.3
CHMP3-206ENST00000466032 AKR1B1P15121 316 aa6.96□□□□□ -1.3
CHMP3-206ENST00000466032 SCRN1Q12765 414 aa6.96□□□□□ -1.3
CHMP3-206ENST00000466032 TRIM29Q14134 588 aa6.96□□□□□ -1.3
CHMP3-206ENST00000466032 GRM4Q14833 912 aa6.96□□□□□ -1.3
CHMP3-206ENST00000466032 LARP1BQ659C4 914 aaKnown RBP6.96□□□□□ -1.3
CHMP3-206ENST00000466032 ATL3Q6DD88 541 aa6.96□□□□□ -1.3
CHMP3-206ENST00000466032 MCTP2Q6DN12 878 aa6.96□□□□□ -1.3
CHMP3-206ENST00000466032 GALNT17Q6IS24 598 aa6.96□□□□□ -1.3
CHMP3-206ENST00000466032 MICU3Q86XE3 530 aa6.96□□□□□ -1.3
CHMP3-206ENST00000466032 ANKRD13AQ8IZ07 590 aa6.96□□□□□ -1.3
CHMP3-206ENST00000466032 SCYL3Q8IZE3 742 aa6.96□□□□□ -1.3
CHMP3-206ENST00000466032 STK11IPQ8N1F8 1099 aa6.96□□□□□ -1.3
CHMP3-206ENST00000466032 SLC44A5Q8NCS7 719 aa6.96□□□□□ -1.3
CHMP3-206ENST00000466032 CHURC1Q8WUH1 139 aa6.96□□□□□ -1.3
CHMP3-206ENST00000466032 NUP133Q8WUM0 1156 aa6.96□□□□□ -1.3
CHMP3-206ENST00000466032 KLRG1Q96E93 195 aa6.96□□□□□ -1.3
CHMP3-206ENST00000466032 ZKSCAN3Q9BRR0 538 aa6.96□□□□□ -1.3
CHMP3-206ENST00000466032 WDR18Q9BV38 432 aa6.96□□□□□ -1.3
CHMP3-206ENST00000466032 SPZ1Q9BXG8 430 aa6.96□□□□□ -1.3
CHMP3-206ENST00000466032 LRRC2Q9BYS8 371 aa6.96□□□□□ -1.3
CHMP3-206ENST00000466032 ZSCAN16Q9H4T2 348 aaPredicted RBP6.96□□□□□ -1.3
CHMP3-206ENST00000466032 DNAJC18Q9H819 358 aa6.96□□□□□ -1.3
CHMP3-206ENST00000466032 GOLGA2P5Q9HBQ8 144 aa6.96□□□□□ -1.3
CHMP3-206ENST00000466032 INCENPQ9NQS7 918 aa6.96□□□□□ -1.3
CHMP3-206ENST00000466032 SH3GLB2Q9NR46 395 aa6.96□□□□□ -1.3
CHMP3-206ENST00000466032 CLIP2Q9UDT6 1046 aa6.96□□□□□ -1.3
CHMP3-206ENST00000466032 BRPF3Q9ULD4 1205 aa6.96□□□□□ -1.3
CHMP3-206ENST00000466032 ZBTB21Q9ULJ3 1066 aa6.96□□□□□ -1.3
CHMP3-206ENST00000466032 TACC3Q9Y6A5 838 aa6.96□□□□□ -1.3
CHMP3-206ENST00000466032 SHTN1A0MZ66 631 aa6.95□□□□□ -1.3
CHMP3-206ENST00000466032 PTPDC1A2A3K4 754 aa6.95□□□□□ -1.3
CHMP3-206ENST00000466032 PALM3A6NDB9 673 aaPredicted RBP6.95□□□□□ -1.3
CHMP3-206ENST00000466032 PHF20L1A8MW92 1017 aa6.95□□□□□ -1.3
CHMP3-206ENST00000466032 USP17L10C9JJH3 530 aa6.95□□□□□ -1.3
CHMP3-206ENST00000466032 GOLGA6L22H0YM25 854 aa6.95□□□□□ -1.3
CHMP3-206ENST00000466032 STX6O43752 255 aa6.95□□□□□ -1.3
CHMP3-206ENST00000466032 FMNL1O95466 1100 aaPredicted RBP6.95□□□□□ -1.3
CHMP3-206ENST00000466032 EGFRP00533 1210 aa6.95□□□□□ -1.3
CHMP3-206ENST00000466032 GH2P01242 217 aa6.95□□□□□ -1.3
CHMP3-206ENST00000466032 ITGB2P05107 769 aa6.95□□□□□ -1.3
CHMP3-206ENST00000466032 EEF2P13639 858 aaKnown RBP6.95□□□□□ -1.3
CHMP3-206ENST00000466032 CALML3P27482 149 aa6.95□□□□□ -1.3
CHMP3-206ENST00000466032 GJB2P29033 226 aa6.95□□□□□ -1.3
CHMP3-206ENST00000466032 SLC1A4P43007 532 aa6.95□□□□□ -1.3
CHMP3-206ENST00000466032 STK3Q13188 491 aa6.95□□□□□ -1.3
CHMP3-206ENST00000466032 RAB3GAP1Q15042 981 aa6.95□□□□□ -1.3
CHMP3-206ENST00000466032 SAFBQ15424 915 aaKnown RBP eCLIP6.95□□□□□ -1.3
CHMP3-206ENST00000466032 CSPP1Q1MSJ5 1256 aa6.95□□□□□ -1.3
CHMP3-206ENST00000466032 SLC4A8Q2Y0W8 1093 aa6.95□□□□□ -1.3
CHMP3-206ENST00000466032 EAPPQ56P03 285 aaPredicted RBP6.95□□□□□ -1.3
CHMP3-206ENST00000466032 NBPF12Q5TAG4 269 aaPredicted RBP6.95□□□□□ -1.3
CHMP3-206ENST00000466032 TMTC3Q6ZXV5 915 aa6.95□□□□□ -1.3
CHMP3-206ENST00000466032 NOL8Q76FK4 1167 aaKnown RBP6.95□□□□□ -1.3
CHMP3-206ENST00000466032 FAM160B2Q86V87 743 aa6.95□□□□□ -1.3
CHMP3-206ENST00000466032 NSUN7Q8NE18 718 aaKnown RBP6.95□□□□□ -1.3
CHMP3-206ENST00000466032 CCDC148Q8NFR7 591 aa6.95□□□□□ -1.3
CHMP3-206ENST00000466032 HPS1Q92902 700 aa6.95□□□□□ -1.3
CHMP3-206ENST00000466032 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.95□□□□□ -1.3
CHMP3-206ENST00000466032 KIAA1683Q9H0B3 1180 aa6.95□□□□□ -1.3
CHMP3-206ENST00000466032 BRMS1Q9HCU9 246 aa6.95□□□□□ -1.3
CHMP3-206ENST00000466032 SEC63Q9UGP8 760 aaKnown RBP6.95□□□□□ -1.3
CHMP3-206ENST00000466032 ADAMTSL1Q8N6G6 1762 aa6.95□□□□□ -1.3
CHMP3-206ENST00000466032 GREB1LQ9C091 1923 aaPredicted RBP6.94□□□□□ -1.3
CHMP3-206ENST00000466032 KLRF2D3W0D1 207 aa6.94□□□□□ -1.3
CHMP3-206ENST00000466032 F5H6K3 240 aa6.94□□□□□ -1.3
CHMP3-206ENST00000466032 H3BQV1 296 aa6.94□□□□□ -1.3
CHMP3-206ENST00000466032 CXCL11O14625 94 aa6.94□□□□□ -1.3
CHMP3-206ENST00000466032 WDR46O15213 610 aaKnown RBP6.94□□□□□ -1.3
CHMP3-206ENST00000466032 PROCP04070 461 aa6.94□□□□□ -1.3
CHMP3-206ENST00000466032 PDHBP11177 359 aa6.94□□□□□ -1.3
CHMP3-206ENST00000466032 DDIT3P35638 169 aa6.94□□□□□ -1.3
CHMP3-206ENST00000466032 CCT2P78371 535 aaKnown RBP6.94□□□□□ -1.3
CHMP3-206ENST00000466032 PPATQ06203 517 aa6.94□□□□□ -1.3
CHMP3-206ENST00000466032 KLRC3Q07444 240 aa6.94□□□□□ -1.3
CHMP3-206ENST00000466032 PABPC4Q13310 644 aaKnown RBP eCLIP6.94□□□□□ -1.3
CHMP3-206ENST00000466032 SEPT2Q15019 361 aa6.94□□□□□ -1.3
CHMP3-206ENST00000466032 NTRK3Q16288 839 aa6.94□□□□□ -1.3
CHMP3-206ENST00000466032 USP17L2Q6R6M4 530 aa6.94□□□□□ -1.3
CHMP3-206ENST00000466032 CLEC17AQ6ZS10 378 aa6.94□□□□□ -1.3
CHMP3-206ENST00000466032 MIGA2Q7L4E1 593 aa6.94□□□□□ -1.3
CHMP3-206ENST00000466032 ERO1BQ86YB8 467 aa6.94□□□□□ -1.3
CHMP3-206ENST00000466032 SAMD3Q8N6K7 520 aa6.94□□□□□ -1.3
CHMP3-206ENST00000466032 ZNF280CQ8ND82 737 aa6.94□□□□□ -1.3
CHMP3-206ENST00000466032 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.94□□□□□ -1.3
CHMP3-206ENST00000466032 BICD2Q8TD16 824 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms