RNA–Protein interactions for RNA: ENST00000465966.4

DDR1-242, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 1 (best)

Gene DDR1, Length 268 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-242ENST00000465966 PPP1R12CQ9BZL4 782 aa10.22□□□□□ -0.77
DDR1-242ENST00000465966 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.22□□□□□ -0.77
DDR1-242ENST00000465966 ABHD16BQ9H3Z7 469 aa10.22□□□□□ -0.77
DDR1-242ENST00000465966 ARMT1Q9H993 441 aa10.22□□□□□ -0.77
DDR1-242ENST00000465966 ECHDC1Q9NTX5 307 aa10.22□□□□□ -0.77
DDR1-242ENST00000465966 RLFQ13129 1914 aa10.22□□□□□ -0.77
DDR1-242ENST00000465966 TCRBV5S4A2TA0A5A2 114 aa10.21□□□□□ -0.77
DDR1-242ENST00000465966 USP17L12C9JPN9 530 aa10.21□□□□□ -0.77
DDR1-242ENST00000465966 USP17L21D6R901 530 aa10.21□□□□□ -0.77
DDR1-242ENST00000465966 ZBED4O75132 1171 aa10.21□□□□□ -0.77
DDR1-242ENST00000465966 SLC4A3P48751 1232 aa10.21□□□□□ -0.77
DDR1-242ENST00000465966 GJA9P57773 515 aa10.21□□□□□ -0.77
DDR1-242ENST00000465966 C12orf60Q5U649 245 aa10.21□□□□□ -0.77
DDR1-242ENST00000465966 C16orf86Q6ZW13 317 aa10.21□□□□□ -0.77
DDR1-242ENST00000465966 FAM126BQ8IXS8 530 aa10.21□□□□□ -0.77
DDR1-242ENST00000465966 ANKRD35Q8N283 1001 aa10.21□□□□□ -0.77
DDR1-242ENST00000465966 PRPF38AQ8NAV1 312 aaKnown RBP10.21□□□□□ -0.77
DDR1-242ENST00000465966 REPS2Q8NFH8 660 aa10.21□□□□□ -0.77
DDR1-242ENST00000465966 HERVK_113Q902F9 699 aa10.21□□□□□ -0.77
DDR1-242ENST00000465966 GPATCH3Q96I76 525 aa10.21□□□□□ -0.77
DDR1-242ENST00000465966 IL23AQ9NPF7 189 aa10.21□□□□□ -0.77
DDR1-242ENST00000465966 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.21□□□□□ -0.77
DDR1-242ENST00000465966 RAPGEFL1Q9UHV5 662 aa10.21□□□□□ -0.77
DDR1-242ENST00000465966 FOCADQ5VW36 1801 aa10.21□□□□□ -0.78
DDR1-242ENST00000465966 SPTBN5Q9NRC6 3674 aaKnown RBP10.2□□□□□ -0.78
DDR1-242ENST00000465966 MYADML2A6NDP7 307 aa10.2□□□□□ -0.78
DDR1-242ENST00000465966 PRKAB2O43741 272 aa10.2□□□□□ -0.78
DDR1-242ENST00000465966 ZEB2O60315 1214 aa10.2□□□□□ -0.78
DDR1-242ENST00000465966 CABYRO75952 493 aa10.2□□□□□ -0.78
DDR1-242ENST00000465966 MBD4O95243 580 aa10.2□□□□□ -0.78
DDR1-242ENST00000465966 ADGRE1Q14246 886 aa10.2□□□□□ -0.78
DDR1-242ENST00000465966 CCDC144BQ3MJ40 725 aa10.2□□□□□ -0.78
DDR1-242ENST00000465966 NOL8Q76FK4 1167 aaKnown RBP10.2□□□□□ -0.78
DDR1-242ENST00000465966 SEZ6LQ9BYH1 1024 aa10.2□□□□□ -0.78
DDR1-242ENST00000465966 UPF3AQ9H1J1 476 aaKnown RBP10.2□□□□□ -0.78
DDR1-242ENST00000465966 NKX2-4Q9H2Z4 354 aa10.2□□□□□ -0.78
DDR1-242ENST00000465966 HIPK3Q9H422 1215 aa10.2□□□□□ -0.78
DDR1-242ENST00000465966 CXXC1Q9P0U4 656 aaPredicted RBP10.2□□□□□ -0.78
DDR1-242ENST00000465966 FBXO40Q9UH90 709 aa10.2□□□□□ -0.78
DDR1-242ENST00000465966 DNAH12Q6ZR08 3092 aa10.2□□□□□ -0.78
DDR1-242ENST00000465966 DNAJC25-GNG10A0A024R161 153 aa10.19□□□□□ -0.78
DDR1-242ENST00000465966 TRIM6-TRIM34B2RNG4 842 aa10.19□□□□□ -0.78
DDR1-242ENST00000465966 ATP2A1O14983 1001 aa10.19□□□□□ -0.78
DDR1-242ENST00000465966 ERC2O15083 957 aa10.19□□□□□ -0.78
DDR1-242ENST00000465966 CYP2C18P33260 490 aa10.19□□□□□ -0.78
DDR1-242ENST00000465966 ADD2P35612 726 aa10.19□□□□□ -0.78
DDR1-242ENST00000465966 MFAP1P55081 439 aaKnown RBP10.19□□□□□ -0.78
DDR1-242ENST00000465966 SKIV2LQ15477 1246 aaKnown RBP10.19□□□□□ -0.78
DDR1-242ENST00000465966 PPP2R2DQ66LE6 453 aa10.19□□□□□ -0.78
DDR1-242ENST00000465966 ARMCX2Q7L311 632 aa10.19□□□□□ -0.78
DDR1-242ENST00000465966 OTOP2Q7RTS6 562 aa10.19□□□□□ -0.78
DDR1-242ENST00000465966 RPUSD2Q8IZ73 545 aaKnown RBP10.19□□□□□ -0.78
DDR1-242ENST00000465966 CPXCR1Q8N123 301 aa10.19□□□□□ -0.78
DDR1-242ENST00000465966 MICALL1Q8N3F8 863 aa10.19□□□□□ -0.78
DDR1-242ENST00000465966 CHST13Q8NET6 341 aa10.19□□□□□ -0.78
DDR1-242ENST00000465966 SLC4A7Q9Y6M7 1214 aa10.19□□□□□ -0.78
DDR1-242ENST00000465966 SLC4A4Q9Y6R1 1079 aa10.19□□□□□ -0.78
DDR1-242ENST00000465966 LAMA2P24043 3122 aaKnown RBP10.19□□□□□ -0.78
DDR1-242ENST00000465966 MYH1P12882 1939 aa10.18□□□□□ -0.78
DDR1-242ENST00000465966 CYP2D7A0A087X1C5 515 aa10.18□□□□□ -0.78
DDR1-242ENST00000465966 F5H6K3 240 aa10.18□□□□□ -0.78
DDR1-242ENST00000465966 CD4P01730 458 aa10.18□□□□□ -0.78
DDR1-242ENST00000465966 ATP5JP18859 108 aa10.18□□□□□ -0.78
DDR1-242ENST00000465966 TNFAIP2Q03169 654 aa10.18□□□□□ -0.78
DDR1-242ENST00000465966 KLRC3Q07444 240 aa10.18□□□□□ -0.78
DDR1-242ENST00000465966 ZSCAN25Q6NSZ9 544 aa10.18□□□□□ -0.78
DDR1-242ENST00000465966 CTR9Q6PD62 1173 aa10.18□□□□□ -0.78
DDR1-242ENST00000465966 RILPL2Q969X0 211 aa10.18□□□□□ -0.78
DDR1-242ENST00000465966 KIFC2Q96AC6 838 aa10.18□□□□□ -0.78
DDR1-242ENST00000465966 NUP88Q99567 741 aaPredicted RBP10.18□□□□□ -0.78
DDR1-242ENST00000465966 AP5M1Q9H0R1 490 aa10.18□□□□□ -0.78
DDR1-242ENST00000465966 MKNK2Q9HBH9 465 aa10.18□□□□□ -0.78
DDR1-242ENST00000465966 PAG1Q9NWQ8 432 aa10.18□□□□□ -0.78
DDR1-242ENST00000465966 NYAP2Q9P242 653 aa10.18□□□□□ -0.78
DDR1-242ENST00000465966 ARPP21Q9UBL0 812 aaPredicted RBP10.18□□□□□ -0.78
DDR1-242ENST00000465966 RIPK3Q9Y572 518 aa10.18□□□□□ -0.78
DDR1-242ENST00000465966 TTC28Q96AY4 2481 aa10.18□□□□□ -0.78
DDR1-242ENST00000465966 A0A0G2JMZ2 1700 aa10.18□□□□□ -0.78
DDR1-242ENST00000465966 MYH7P12883 1935 aa10.17□□□□□ -0.78
DDR1-242ENST00000465966 EYSQ5T1H1 3165 aa10.17□□□□□ -0.78
DDR1-242ENST00000465966 ASB14A6NK59 587 aa10.17□□□□□ -0.78
DDR1-242ENST00000465966 ZBBXA8MT70 800 aa10.17□□□□□ -0.78
DDR1-242ENST00000465966 GTPBP6O43824 516 aaPredicted RBP10.17□□□□□ -0.78
DDR1-242ENST00000465966 NDUFB10O96000 172 aa10.17□□□□□ -0.78
DDR1-242ENST00000465966 BMP1P13497 986 aa10.17□□□□□ -0.78
DDR1-242ENST00000465966 OAZ1P54368 228 aa10.17□□□□□ -0.78
DDR1-242ENST00000465966 CCL23P55773 120 aa10.17□□□□□ -0.78
DDR1-242ENST00000465966 NKX3-2P78367 333 aa10.17□□□□□ -0.78
DDR1-242ENST00000465966 IRX5P78411 483 aaPredicted RBP10.17□□□□□ -0.78
DDR1-242ENST00000465966 ITGA7Q13683 1181 aa10.17□□□□□ -0.78
DDR1-242ENST00000465966 UBE3CQ15386 1083 aa10.17□□□□□ -0.78
DDR1-242ENST00000465966 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.17□□□□□ -0.78
DDR1-242ENST00000465966 CCDC144CPQ8IYA2 1237 aa10.17□□□□□ -0.78
DDR1-242ENST00000465966 BOLA2Q9H3K6 86 aa10.17□□□□□ -0.78
DDR1-242ENST00000465966 SLC38A10Q9HBR0 1119 aa10.17□□□□□ -0.78
DDR1-242ENST00000465966 ZNF287Q9HBT7 754 aa10.17□□□□□ -0.78
DDR1-242ENST00000465966 RAVER2Q9HCJ3 691 aaKnown RBP10.17□□□□□ -0.78
DDR1-242ENST00000465966 FEM1BQ9UK73 627 aa10.17□□□□□ -0.78
DDR1-242ENST00000465966 YBX2Q9Y2T7 364 aaKnown RBP10.17□□□□□ -0.78
DDR1-242ENST00000465966 HCN4Q9Y3Q4 1203 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms