RNA–Protein interactions for RNA: ENST00000465659.5

ARHGEF3-204, Transcript of Rho guanine nucleotide exchange factor 3, humanhuman

TSL 1 (best)

Gene ARHGEF3, Length 2,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3-204ENST00000465659 CTAGE4Q8IX94 777 aa14.35□□□□□ -0.11
ARHGEF3-204ENST00000465659 TXLNBQ8N3L3 684 aa14.35□□□□□ -0.11
ARHGEF3-204ENST00000465659 STAG2Q8N3U4 1231 aa14.35□□□□□ -0.11
ARHGEF3-204ENST00000465659 NLRP3Q96P20 1036 aa14.35□□□□□ -0.11
ARHGEF3-204ENST00000465659 HAUS4Q9H6D7 363 aa14.35□□□□□ -0.11
ARHGEF3-204ENST00000465659 BARHL2Q9NY43 387 aa14.35□□□□□ -0.11
ARHGEF3-204ENST00000465659 PSD3Q9NYI0 1048 aa14.35□□□□□ -0.11
ARHGEF3-204ENST00000465659 TFCP2L1Q9NZI6 479 aa14.35□□□□□ -0.11
ARHGEF3-204ENST00000465659 L1RE1Q9UN81 338 aa14.35□□□□□ -0.11
ARHGEF3-204ENST00000465659 LUC7L2Q9Y383 392 aaKnown RBP14.35□□□□□ -0.11
ARHGEF3-204ENST00000465659 ERICH4A6NGS2 130 aa14.35□□□□□ -0.11
ARHGEF3-204ENST00000465659 PSMD14O00487 310 aa14.35□□□□□ -0.11
ARHGEF3-204ENST00000465659 PSMA7O14818 248 aa14.35□□□□□ -0.11
ARHGEF3-204ENST00000465659 GPS2Q13227 327 aa14.35□□□□□ -0.11
ARHGEF3-204ENST00000465659 MEA1Q16626 185 aa14.35□□□□□ -0.11
ARHGEF3-204ENST00000465659 TTI2Q6NXR4 508 aa14.35□□□□□ -0.11
ARHGEF3-204ENST00000465659 DHTKD1Q96HY7 919 aaPredicted RBP14.35□□□□□ -0.11
ARHGEF3-204ENST00000465659 CHP1Q99653 195 aa14.35□□□□□ -0.11
ARHGEF3-204ENST00000465659 TMEM60Q9H2L4 133 aa14.35□□□□□ -0.11
ARHGEF3-204ENST00000465659 MYO6Q9UM54 1294 aa14.35□□□□□ -0.11
ARHGEF3-204ENST00000465659 MAPK8IP1Q9UQF2 711 aa14.35□□□□□ -0.11
ARHGEF3-204ENST00000465659 TRIM49BA6NDI0 452 aa14.34□□□□□ -0.11
ARHGEF3-204ENST00000465659 STXBP3O00186 592 aa14.34□□□□□ -0.11
ARHGEF3-204ENST00000465659 DNM2P50570 870 aa14.34□□□□□ -0.11
ARHGEF3-204ENST00000465659 PMS1P54277 932 aaKnown RBP14.34□□□□□ -0.11
ARHGEF3-204ENST00000465659 SLC35G1Q2M3R5 365 aa14.34□□□□□ -0.11
ARHGEF3-204ENST00000465659 AK8Q96MA6 479 aa14.34□□□□□ -0.11
ARHGEF3-204ENST00000465659 LZTS2Q9BRK4 669 aa14.34□□□□□ -0.11
ARHGEF3-204ENST00000465659 ZCCHC17Q9NP64 241 aaKnown RBP14.34□□□□□ -0.11
ARHGEF3-204ENST00000465659 SRGNP10124 158 aa14.34□□□□□ -0.11
ARHGEF3-204ENST00000465659 UBA7P41226 1012 aa14.34□□□□□ -0.11
ARHGEF3-204ENST00000465659 TRAPPC11Q7Z392 1133 aa14.34□□□□□ -0.11
ARHGEF3-204ENST00000465659 DZIP1Q86YF9 867 aaKnown RBP14.34□□□□□ -0.11
ARHGEF3-204ENST00000465659 RETREG2Q8NC44 543 aa14.34□□□□□ -0.11
ARHGEF3-204ENST00000465659 RASGRP4Q8TDF6 673 aa14.34□□□□□ -0.11
ARHGEF3-204ENST00000465659 EXOC4Q96A65 974 aa14.34□□□□□ -0.11
ARHGEF3-204ENST00000465659 GBP3Q9H0R5 595 aa14.34□□□□□ -0.11
ARHGEF3-204ENST00000465659 PALM3A6NDB9 673 aaPredicted RBP14.33□□□□□ -0.12
ARHGEF3-204ENST00000465659 CYTH3O43739 400 aa14.33□□□□□ -0.12
ARHGEF3-204ENST00000465659 WDR59Q6PJI9 974 aa14.33□□□□□ -0.12
ARHGEF3-204ENST00000465659 NAV1Q8NEY1 1877 aa14.33□□□□□ -0.12
ARHGEF3-204ENST00000465659 FLT1P17948 1338 aa14.33□□□□□ -0.12
ARHGEF3-204ENST00000465659 H3BQF6 201 aa14.33□□□□□ -0.12
ARHGEF3-204ENST00000465659 KCNQ2O43526 872 aa14.33□□□□□ -0.12
ARHGEF3-204ENST00000465659 ST5P78524 1137 aa14.33□□□□□ -0.12
ARHGEF3-204ENST00000465659 WDR93Q6P2C0 686 aa14.33□□□□□ -0.12
ARHGEF3-204ENST00000465659 NUP58Q9BVL2 599 aa14.33□□□□□ -0.12
ARHGEF3-204ENST00000465659 TTYH3Q9C0H2 523 aa14.33□□□□□ -0.12
ARHGEF3-204ENST00000465659 NARFQ9UHQ1 456 aa14.33□□□□□ -0.12
ARHGEF3-204ENST00000465659 PP2D1A8MPX8 630 aa14.32□□□□□ -0.12
ARHGEF3-204ENST00000465659 PPP1R2P41236 205 aa14.32□□□□□ -0.12
ARHGEF3-204ENST00000465659 PPP4CP60510 307 aa14.32□□□□□ -0.12
ARHGEF3-204ENST00000465659 INF2Q27J81 1249 aa14.32□□□□□ -0.12
ARHGEF3-204ENST00000465659 COBLL1Q53SF7 1204 aa14.32□□□□□ -0.12
ARHGEF3-204ENST00000465659 BICDL1Q6ZP65 573 aa14.32□□□□□ -0.12
ARHGEF3-204ENST00000465659 TRIM47Q96LD4 638 aa14.32□□□□□ -0.12
ARHGEF3-204ENST00000465659 DUSP9Q99956 384 aaKnown RBP14.32□□□□□ -0.12
ARHGEF3-204ENST00000465659 ABCB6Q9NP58 842 aa14.32□□□□□ -0.12
ARHGEF3-204ENST00000465659 MAGEC2Q9UBF1 373 aaPredicted RBP14.32□□□□□ -0.12
ARHGEF3-204ENST00000465659 SBF2Q86WG5 1849 aa14.32□□□□□ -0.12
ARHGEF3-204ENST00000465659 TM4SF1P30408 202 aa14.32□□□□□ -0.12
ARHGEF3-204ENST00000465659 HERVK_113P62684 666 aa14.32□□□□□ -0.12
ARHGEF3-204ENST00000465659 KRT83P78385 493 aa14.32□□□□□ -0.12
ARHGEF3-204ENST00000465659 TSR1Q2NL82 804 aaKnown RBP14.32□□□□□ -0.12
ARHGEF3-204ENST00000465659 MUM1L1Q5H9M0 696 aa14.32□□□□□ -0.12
ARHGEF3-204ENST00000465659 TXNRD3Q86VQ6 643 aa14.32□□□□□ -0.12
ARHGEF3-204ENST00000465659 WDR66Q8TBY9 1149 aa14.32□□□□□ -0.12
ARHGEF3-204ENST00000465659 LRRC15Q8TF66 581 aa14.32□□□□□ -0.12
ARHGEF3-204ENST00000465659 SPZ1Q9BXG8 430 aa14.32□□□□□ -0.12
ARHGEF3-204ENST00000465659 ZMYND12Q9H0C1 365 aa14.32□□□□□ -0.12
ARHGEF3-204ENST00000465659 BICDL2A1A5D9 508 aa14.31□□□□□ -0.12
ARHGEF3-204ENST00000465659 EIF3JO75822 258 aaKnown RBP14.31□□□□□ -0.12
ARHGEF3-204ENST00000465659 CCNE1P24864 410 aa14.31□□□□□ -0.12
ARHGEF3-204ENST00000465659 VSNL1P62760 191 aa14.31□□□□□ -0.12
ARHGEF3-204ENST00000465659 RC3H1Q5TC82 1133 aaKnown RBP14.31□□□□□ -0.12
ARHGEF3-204ENST00000465659 PAPD7Q5XG87 772 aaKnown RBP14.31□□□□□ -0.12
ARHGEF3-204ENST00000465659 EHBP1Q8NDI1 1231 aa14.31□□□□□ -0.12
ARHGEF3-204ENST00000465659 SETDB2Q96T68 719 aa14.31□□□□□ -0.12
ARHGEF3-204ENST00000465659 C7orf25Q9BPX7 421 aa14.31□□□□□ -0.12
ARHGEF3-204ENST00000465659 ADAM21Q9UKJ8 722 aa14.31□□□□□ -0.12
ARHGEF3-204ENST00000465659 TFRCP02786 760 aaKnown RBP14.31□□□□□ -0.12
ARHGEF3-204ENST00000465659 HNRNPH2P55795 449 aaKnown RBP14.31□□□□□ -0.12
ARHGEF3-204ENST00000465659 GSTO1P78417 241 aa14.31□□□□□ -0.12
ARHGEF3-204ENST00000465659 FIGNQ5HY92 759 aa14.31□□□□□ -0.12
ARHGEF3-204ENST00000465659 KRT25Q7Z3Z0 450 aa14.31□□□□□ -0.12
ARHGEF3-204ENST00000465659 HEATR3Q7Z4Q2 680 aa14.31□□□□□ -0.12
ARHGEF3-204ENST00000465659 CCDC170Q8IYT3 715 aa14.31□□□□□ -0.12
ARHGEF3-204ENST00000465659 RASSF8Q8NHQ8 419 aa14.31□□□□□ -0.12
ARHGEF3-204ENST00000465659 DYNLL2Q96FJ2 89 aa14.31□□□□□ -0.12
ARHGEF3-204ENST00000465659 TUBGCP2Q9BSJ2 902 aa14.31□□□□□ -0.12
ARHGEF3-204ENST00000465659 MKNK2Q9HBH9 465 aa14.31□□□□□ -0.12
ARHGEF3-204ENST00000465659 EXOC1Q9NV70 894 aa14.31□□□□□ -0.12
ARHGEF3-204ENST00000465659 GUCA1BQ9UMX6 200 aa14.31□□□□□ -0.12
ARHGEF3-204ENST00000465659 USP17L3A6NCW0 530 aa14.3□□□□□ -0.12
ARHGEF3-204ENST00000465659 USP17L4A6NCW7 530 aa14.3□□□□□ -0.12
ARHGEF3-204ENST00000465659 LDHBP07195 334 aaKnown RBP14.3□□□□□ -0.12
ARHGEF3-204ENST00000465659 TSPY3P0CV98 308 aa14.3□□□□□ -0.12
ARHGEF3-204ENST00000465659 TSPY8P0CW00 308 aa14.3□□□□□ -0.12
ARHGEF3-204ENST00000465659 CDK17Q00537 523 aa14.3□□□□□ -0.12
ARHGEF3-204ENST00000465659 ORC2Q13416 577 aaPredicted RBP14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms