RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 C16orf59Q7L2K0 433 aa16.2■□□□□ 0.18
HDAC6-215ENST00000465457 CHMP4CQ96CF2 233 aa16.2■□□□□ 0.18
HDAC6-215ENST00000465457 MAML3Q96JK9 1138 aa16.2■□□□□ 0.18
HDAC6-215ENST00000465457 SPATC1LQ9H0A9 340 aa16.2■□□□□ 0.18
HDAC6-215ENST00000465457 XPNPEP3Q9NQH7 507 aa16.2■□□□□ 0.18
HDAC6-215ENST00000465457 PIH1D3Q9NQM4 214 aaKnown RBP16.2■□□□□ 0.18
HDAC6-215ENST00000465457 A0A1W2PRG0 241 aa16.19■□□□□ 0.18
HDAC6-215ENST00000465457 BAG3O95817 575 aa16.19■□□□□ 0.18
HDAC6-215ENST00000465457 HLA-DOAP06340 250 aa16.19■□□□□ 0.18
HDAC6-215ENST00000465457 GNAT2P19087 354 aa16.19■□□□□ 0.18
HDAC6-215ENST00000465457 IMMTQ16891 758 aaKnown RBP16.19■□□□□ 0.18
HDAC6-215ENST00000465457 CLEC17AQ6ZS10 378 aa16.19■□□□□ 0.18
HDAC6-215ENST00000465457 NEK1Q96PY6 1258 aa16.19■□□□□ 0.18
HDAC6-215ENST00000465457 GAS2L1Q99501 681 aaPredicted RBP16.19■□□□□ 0.18
HDAC6-215ENST00000465457 TMEM39AQ9NV64 488 aa16.19■□□□□ 0.18
HDAC6-215ENST00000465457 GPAA1O43292 621 aa16.18■□□□□ 0.18
HDAC6-215ENST00000465457 CYP21A2P08686 494 aa16.18■□□□□ 0.18
HDAC6-215ENST00000465457 PLCG2P16885 1265 aa16.18■□□□□ 0.18
HDAC6-215ENST00000465457 SHMT1P34896 483 aa16.18■□□□□ 0.18
HDAC6-215ENST00000465457 USP14P54578 494 aa16.18■□□□□ 0.18
HDAC6-215ENST00000465457 IRX5P78411 483 aaPredicted RBP16.18■□□□□ 0.18
HDAC6-215ENST00000465457 MIGA1Q8NAN2 632 aa16.18■□□□□ 0.18
HDAC6-215ENST00000465457 PRRC2BQ5JSZ5 2229 aaKnown RBP16.18■□□□□ 0.18
HDAC6-215ENST00000465457 ZNF532Q9HCE3 1301 aa16.18■□□□□ 0.18
HDAC6-215ENST00000465457 TCRBV5S4A2TA0A5A2 114 aa16.17■□□□□ 0.18
HDAC6-215ENST00000465457 GOLGA6L22H0YM25 854 aa16.17■□□□□ 0.18
HDAC6-215ENST00000465457 MCM4P33991 863 aa16.17■□□□□ 0.18
HDAC6-215ENST00000465457 MRPS5P82675 430 aaKnown RBP16.17■□□□□ 0.18
HDAC6-215ENST00000465457 TFF2Q03403 129 aa16.17■□□□□ 0.18
HDAC6-215ENST00000465457 SEPT2Q15019 361 aa16.17■□□□□ 0.18
HDAC6-215ENST00000465457 ABCB5Q2M3G0 1257 aa16.17■□□□□ 0.18
HDAC6-215ENST00000465457 AKNAD1Q5T1N1 836 aa16.17■□□□□ 0.18
HDAC6-215ENST00000465457 CLEC10AQ8IUN9 316 aa16.17■□□□□ 0.18
HDAC6-215ENST00000465457 TANGO6Q9C0B7 1094 aa16.17■□□□□ 0.18
HDAC6-215ENST00000465457 FOXD4L1Q9NU39 408 aa16.17■□□□□ 0.18
HDAC6-215ENST00000465457 TBX21Q9UL17 535 aa16.17■□□□□ 0.18
HDAC6-215ENST00000465457 TRANK1O15050 2925 aa16.16■□□□□ 0.18
HDAC6-215ENST00000465457 ROBO3Q96MS0 1386 aa16.16■□□□□ 0.18
HDAC6-215ENST00000465457 MUC6Q6W4X9 2439 aa16.16■□□□□ 0.18
HDAC6-215ENST00000465457 MYADML2A6NDP7 307 aa16.16■□□□□ 0.18
HDAC6-215ENST00000465457 ADAMTS4O75173 837 aa16.16■□□□□ 0.18
HDAC6-215ENST00000465457 PGK2P07205 417 aa16.16■□□□□ 0.18
HDAC6-215ENST00000465457 ACRP10323 421 aa16.16■□□□□ 0.18
HDAC6-215ENST00000465457 RARBP10826 455 aa16.16■□□□□ 0.18
HDAC6-215ENST00000465457 IGFBP4P22692 258 aa16.16■□□□□ 0.18
HDAC6-215ENST00000465457 ALX1Q15699 326 aa16.16■□□□□ 0.18
HDAC6-215ENST00000465457 CERKLQ49MI3 558 aaPredicted RBP16.16■□□□□ 0.18
HDAC6-215ENST00000465457 TMEM240Q5SV17 173 aa16.16■□□□□ 0.18
HDAC6-215ENST00000465457 RASIP1Q5U651 963 aa16.16■□□□□ 0.18
HDAC6-215ENST00000465457 NCAPG2Q86XI2 1143 aa16.16■□□□□ 0.18
HDAC6-215ENST00000465457 TNPO1Q92973 898 aaKnown RBP16.16■□□□□ 0.18
HDAC6-215ENST00000465457 PUS7LQ9H0K6 701 aaKnown RBP16.16■□□□□ 0.18
HDAC6-215ENST00000465457 SERPINB13Q9UIV8 391 aa16.16■□□□□ 0.18
HDAC6-215ENST00000465457 LRRC37A2A6NM11 1700 aa16.16■□□□□ 0.18
HDAC6-215ENST00000465457 WDR19Q8NEZ3 1342 aa16.16■□□□□ 0.18
HDAC6-215ENST00000465457 STRNO43815 780 aa16.15■□□□□ 0.18
HDAC6-215ENST00000465457 CHGBP05060 677 aa16.15■□□□□ 0.18
HDAC6-215ENST00000465457 PLCD1P51178 756 aa16.15■□□□□ 0.18
HDAC6-215ENST00000465457 KCNQ1P51787 676 aa16.15■□□□□ 0.18
HDAC6-215ENST00000465457 PLS1Q14651 629 aa16.15■□□□□ 0.18
HDAC6-215ENST00000465457 DHX32Q7L7V1 743 aaKnown RBP16.15■□□□□ 0.18
HDAC6-215ENST00000465457 ANKRD33Q7Z3H0 272 aa16.15■□□□□ 0.18
HDAC6-215ENST00000465457 FBXL16Q8N461 479 aa16.15■□□□□ 0.18
HDAC6-215ENST00000465457 SLC44A5Q8NCS7 719 aa16.15■□□□□ 0.18
HDAC6-215ENST00000465457 SHCBP1Q8NEM2 672 aa16.15■□□□□ 0.18
HDAC6-215ENST00000465457 ATG4CQ96DT6 458 aa16.15■□□□□ 0.18
HDAC6-215ENST00000465457 PIEZO1Q92508 2521 aa16.15■□□□□ 0.18
HDAC6-215ENST00000465457 TIMP1P01033 207 aa16.14■□□□□ 0.17
HDAC6-215ENST00000465457 ZNF865P0CJ78 1059 aaPredicted RBP16.14■□□□□ 0.17
HDAC6-215ENST00000465457 CSF2RAP15509 400 aa16.14■□□□□ 0.17
HDAC6-215ENST00000465457 COG2Q14746 738 aa16.14■□□□□ 0.17
HDAC6-215ENST00000465457 SAMD1Q6SPF0 538 aaPredicted RBP16.14■□□□□ 0.17
HDAC6-215ENST00000465457 NOL8Q76FK4 1167 aaKnown RBP16.14■□□□□ 0.17
HDAC6-215ENST00000465457 MAGEB6Q8N7X4 407 aa16.14■□□□□ 0.17
HDAC6-215ENST00000465457 NACAP1Q9BZK3 213 aa16.14■□□□□ 0.17
HDAC6-215ENST00000465457 EHD4Q9H223 541 aa16.14■□□□□ 0.17
HDAC6-215ENST00000465457 NKX2-4Q9H2Z4 354 aa16.14■□□□□ 0.17
HDAC6-215ENST00000465457 CXXC1Q9P0U4 656 aaPredicted RBP16.14■□□□□ 0.17
HDAC6-215ENST00000465457 YBX2Q9Y2T7 364 aaKnown RBP16.14■□□□□ 0.17
HDAC6-215ENST00000465457 SYNRGQ9UMZ2 1314 aa16.14■□□□□ 0.17
HDAC6-215ENST00000465457 BAZ2AQ9UIF9 1905 aaKnown RBP16.13■□□□□ 0.17
HDAC6-215ENST00000465457 LAMA4Q16363 1823 aa16.13■□□□□ 0.17
HDAC6-215ENST00000465457 E7EWF7 191 aa16.13■□□□□ 0.17
HDAC6-215ENST00000465457 ZNF213O14771 459 aa16.13■□□□□ 0.17
HDAC6-215ENST00000465457 CYP7A1P22680 504 aa16.13■□□□□ 0.17
HDAC6-215ENST00000465457 USP5P45974 858 aa16.13■□□□□ 0.17
HDAC6-215ENST00000465457 ACLYP53396 1101 aa16.13■□□□□ 0.17
HDAC6-215ENST00000465457 RNF180Q86T96 592 aa16.13■□□□□ 0.17
HDAC6-215ENST00000465457 SPICE1Q8N0Z3 855 aa16.13■□□□□ 0.17
HDAC6-215ENST00000465457 STRBPQ96SI9 672 aaKnown RBP16.13■□□□□ 0.17
HDAC6-215ENST00000465457 EPHX3Q9H6B9 360 aa16.13■□□□□ 0.17
HDAC6-215ENST00000465457 STARD7Q9NQZ5 370 aa16.13■□□□□ 0.17
HDAC6-215ENST00000465457 SMC3Q9UQE7 1217 aa16.13■□□□□ 0.17
HDAC6-215ENST00000465457 BRWD1Q9NSI6 2320 aa16.12■□□□□ 0.17
HDAC6-215ENST00000465457 PATL2C9JE40 543 aaKnown RBP16.12■□□□□ 0.17
HDAC6-215ENST00000465457 FGAP02671 866 aa16.12■□□□□ 0.17
HDAC6-215ENST00000465457 BMP1P13497 986 aa16.12■□□□□ 0.17
HDAC6-215ENST00000465457 CPA1P15085 419 aa16.12■□□□□ 0.17
HDAC6-215ENST00000465457 FGD1P98174 961 aa16.12■□□□□ 0.17
HDAC6-215ENST00000465457 MFSD5Q6N075 450 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms