RNA–Protein interactions for RNA: ENST00000464616.6

GARNL3-213, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-213ENST00000464616 CRTC3Q6UUV7 619 aa5.36□□□□□ -1.55
GARNL3-213ENST00000464616 C7orf61Q8IZ16 206 aa5.36□□□□□ -1.55
GARNL3-213ENST00000464616 SMARCC1Q92922 1105 aaPredicted RBP5.36□□□□□ -1.55
GARNL3-213ENST00000464616 RNF34Q969K3 372 aa5.36□□□□□ -1.55
GARNL3-213ENST00000464616 SLC9A7Q96T83 725 aa5.36□□□□□ -1.55
GARNL3-213ENST00000464616 PRR13Q9NZ81 148 aa5.36□□□□□ -1.55
GARNL3-213ENST00000464616 SUCOQ9UBS9 1254 aaKnown RBP5.36□□□□□ -1.55
GARNL3-213ENST00000464616 DBR1Q9UK59 544 aaKnown RBP5.36□□□□□ -1.55
GARNL3-213ENST00000464616 NCANO14594 1321 aa5.36□□□□□ -1.55
GARNL3-213ENST00000464616 NOTOA8MTQ0 251 aa5.35□□□□□ -1.55
GARNL3-213ENST00000464616 ZNF205O95201 554 aa5.35□□□□□ -1.55
GARNL3-213ENST00000464616 PFKLP17858 780 aa5.35□□□□□ -1.55
GARNL3-213ENST00000464616 EPHB3P54753 998 aa5.35□□□□□ -1.55
GARNL3-213ENST00000464616 TCEAL1Q15170 157 aa5.35□□□□□ -1.55
GARNL3-213ENST00000464616 INTS3Q68E01 1043 aaKnown RBP5.35□□□□□ -1.55
GARNL3-213ENST00000464616 MZB1Q8WU39 189 aa5.35□□□□□ -1.55
GARNL3-213ENST00000464616 ERVK13-1Q9NX77 482 aa5.35□□□□□ -1.55
GARNL3-213ENST00000464616 IMPACTQ9P2X3 320 aa5.35□□□□□ -1.55
GARNL3-213ENST00000464616 TP53P04637 393 aaPredicted RBP5.34□□□□□ -1.55
GARNL3-213ENST00000464616 YBX1P67809 324 aaKnown RBP5.34□□□□□ -1.55
GARNL3-213ENST00000464616 TRIM26Q12899 539 aaPredicted RBP5.34□□□□□ -1.55
GARNL3-213ENST00000464616 NFIXQ14938 502 aa5.34□□□□□ -1.55
GARNL3-213ENST00000464616 NR1I3Q14994 352 aa5.34□□□□□ -1.55
GARNL3-213ENST00000464616 TMCO4Q5TGY1 634 aa5.34□□□□□ -1.55
GARNL3-213ENST00000464616 TDRD10Q5VZ19 366 aaKnown RBP5.34□□□□□ -1.55
GARNL3-213ENST00000464616 ZC3H14Q6PJT7 736 aaKnown RBP5.34□□□□□ -1.55
GARNL3-213ENST00000464616 NLGN1Q8N2Q7 840 aa5.34□□□□□ -1.55
GARNL3-213ENST00000464616 PANK1Q8TE04 598 aa5.34□□□□□ -1.55
GARNL3-213ENST00000464616 TM9SF2Q99805 663 aa5.34□□□□□ -1.55
GARNL3-213ENST00000464616 CNTD2Q9H8S5 307 aa5.34□□□□□ -1.55
GARNL3-213ENST00000464616 FAM86C1Q9NVL1 165 aa5.34□□□□□ -1.55
GARNL3-213ENST00000464616 SF3B6Q9Y3B4 125 aaKnown RBP5.34□□□□□ -1.55
GARNL3-213ENST00000464616 TBC1D8O95759 1140 aa5.33□□□□□ -1.56
GARNL3-213ENST00000464616 ITGA4P13612 1032 aa5.33□□□□□ -1.56
GARNL3-213ENST00000464616 PMS1P54277 932 aaKnown RBP5.33□□□□□ -1.56
GARNL3-213ENST00000464616 POU4F1Q01851 419 aa5.33□□□□□ -1.56
GARNL3-213ENST00000464616 KIR3DS1Q14943 382 aa5.33□□□□□ -1.56
GARNL3-213ENST00000464616 BICRALQ6AI39 1079 aa5.33□□□□□ -1.56
GARNL3-213ENST00000464616 CYP2R1Q6VVX0 501 aa5.33□□□□□ -1.56
GARNL3-213ENST00000464616 LDHDQ86WU2 507 aa5.33□□□□□ -1.56
GARNL3-213ENST00000464616 SP8Q8IXZ3 490 aa5.33□□□□□ -1.56
GARNL3-213ENST00000464616 MARCH10Q8NA82 808 aaPredicted RBP5.33□□□□□ -1.56
GARNL3-213ENST00000464616 BRF1Q92994 677 aa5.33□□□□□ -1.56
GARNL3-213ENST00000464616 KLHL14Q9P2G3 628 aa5.33□□□□□ -1.56
GARNL3-213ENST00000464616 ZNRF3Q9ULT6 936 aa5.33□□□□□ -1.56
GARNL3-213ENST00000464616 FAN1Q9Y2M0 1017 aa5.33□□□□□ -1.56
GARNL3-213ENST00000464616 BUB1BO60566 1050 aaPredicted RBP5.32□□□□□ -1.56
GARNL3-213ENST00000464616 SYN1P17600 705 aa5.32□□□□□ -1.56
GARNL3-213ENST00000464616 CTSKP43235 329 aa5.32□□□□□ -1.56
GARNL3-213ENST00000464616 CDR1P51861 262 aa5.32□□□□□ -1.56
GARNL3-213ENST00000464616 VMACQ2NL98 169 aa5.32□□□□□ -1.56
GARNL3-213ENST00000464616 DCAF15Q66K64 600 aa5.32□□□□□ -1.56
GARNL3-213ENST00000464616 SLCO6A1Q86UG4 719 aa5.32□□□□□ -1.56
GARNL3-213ENST00000464616 PWWP2AQ96N64 755 aa5.32□□□□□ -1.56
GARNL3-213ENST00000464616 JMJD8Q96S16 334 aa5.32□□□□□ -1.56
GARNL3-213ENST00000464616 KRTAP4-9Q9BYQ8 210 aa5.32□□□□□ -1.56
GARNL3-213ENST00000464616 ACSL6Q9UKU0 697 aa5.32□□□□□ -1.56
GARNL3-213ENST00000464616 C9IYK1 514 aa5.31□□□□□ -1.56
GARNL3-213ENST00000464616 H0Y8X5 98 aa5.31□□□□□ -1.56
GARNL3-213ENST00000464616 EFEMP2O95967 443 aa5.31□□□□□ -1.56
GARNL3-213ENST00000464616 CD3EP07766 207 aa5.31□□□□□ -1.56
GARNL3-213ENST00000464616 ZNF16P17020 682 aaPredicted RBP5.31□□□□□ -1.56
GARNL3-213ENST00000464616 GUCY2CP25092 1073 aa5.31□□□□□ -1.56
GARNL3-213ENST00000464616 NCKAP1LP55160 1127 aa5.31□□□□□ -1.56
GARNL3-213ENST00000464616 TARBP2Q15633 366 aaKnown RBP5.31□□□□□ -1.56
GARNL3-213ENST00000464616 RPTNQ6XPR3 784 aa5.31□□□□□ -1.56
GARNL3-213ENST00000464616 ADAT2Q7Z6V5 191 aaKnown RBP5.31□□□□□ -1.56
GARNL3-213ENST00000464616 CABP7Q86V35 215 aa5.31□□□□□ -1.56
GARNL3-213ENST00000464616 ZDHHC14Q8IZN3 488 aa5.31□□□□□ -1.56
GARNL3-213ENST00000464616 FIBCD1Q8N539 461 aa5.31□□□□□ -1.56
GARNL3-213ENST00000464616 DACT3Q96B18 629 aaPredicted RBP5.31□□□□□ -1.56
GARNL3-213ENST00000464616 ZDHHC15Q96MV8 337 aa5.31□□□□□ -1.56
GARNL3-213ENST00000464616 KCNC2Q96PR1 638 aa5.31□□□□□ -1.56
GARNL3-213ENST00000464616 BACH2Q9BYV9 841 aa5.31□□□□□ -1.56
GARNL3-213ENST00000464616 NOL6Q9H6R4 1146 aaKnown RBP5.31□□□□□ -1.56
GARNL3-213ENST00000464616 GP6Q9HCN6 339 aa5.31□□□□□ -1.56
GARNL3-213ENST00000464616 METTL5Q9NRN9 209 aaKnown RBP5.31□□□□□ -1.56
GARNL3-213ENST00000464616 PCDHGB7Q9Y5F8 929 aa5.31□□□□□ -1.56
GARNL3-213ENST00000464616 SLC12A7Q9Y666 1083 aa5.31□□□□□ -1.56
GARNL3-213ENST00000464616 FOXD2O60548 495 aaPredicted RBP5.3□□□□□ -1.56
GARNL3-213ENST00000464616 TRIM13O60858 407 aa5.3□□□□□ -1.56
GARNL3-213ENST00000464616 CD247P20963 164 aa5.3□□□□□ -1.56
GARNL3-213ENST00000464616 BUD31P41223 144 aaPredicted RBP5.3□□□□□ -1.56
GARNL3-213ENST00000464616 MAPKAPK2P49137 400 aa5.3□□□□□ -1.56
GARNL3-213ENST00000464616 PPP2R5DQ14738 602 aa5.3□□□□□ -1.56
GARNL3-213ENST00000464616 ZNF394Q53GI3 561 aa5.3□□□□□ -1.56
GARNL3-213ENST00000464616 ANKRD39Q53RE8 183 aa5.3□□□□□ -1.56
GARNL3-213ENST00000464616 PAQR3Q6TCH7 311 aa5.3□□□□□ -1.56
GARNL3-213ENST00000464616 FAM129CQ86XR2 697 aa5.3□□□□□ -1.56
GARNL3-213ENST00000464616 TAB3Q8N5C8 712 aaPredicted RBP5.3□□□□□ -1.56
GARNL3-213ENST00000464616 C20orf173Q96LM9 149 aa5.3□□□□□ -1.56
GARNL3-213ENST00000464616 SLC12A9Q9BXP2 914 aa5.3□□□□□ -1.56
GARNL3-213ENST00000464616 GBP3Q9H0R5 595 aa5.3□□□□□ -1.56
GARNL3-213ENST00000464616 TNFRSF12AQ9NP84 129 aa5.3□□□□□ -1.56
GARNL3-213ENST00000464616 PPT2Q9UMR5 302 aa5.3□□□□□ -1.56
GARNL3-213ENST00000464616 FHOD1Q9Y613 1164 aa5.3□□□□□ -1.56
GARNL3-213ENST00000464616 F8W031 263 aaPredicted RBP5.29□□□□□ -1.56
GARNL3-213ENST00000464616 CYBBP04839 570 aa5.29□□□□□ -1.56
GARNL3-213ENST00000464616 ACRP10323 421 aa5.29□□□□□ -1.56
GARNL3-213ENST00000464616 TACR1P25103 407 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms