RNA–Protein interactions for RNA: ENST00000464539.1

TNRC6A-205, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 1 (best)

Gene TNRC6A, Length 1,853 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-205ENST00000464539 LSP1P33241 339 aa12.86□□□□□ -0.35
TNRC6A-205ENST00000464539 RFC4P35249 363 aa12.86□□□□□ -0.35
TNRC6A-205ENST00000464539 SSRP1Q08945 709 aaKnown RBP12.86□□□□□ -0.35
TNRC6A-205ENST00000464539 TTF1Q15361 905 aaPredicted RBP12.86□□□□□ -0.35
TNRC6A-205ENST00000464539 ZKSCAN8Q15776 578 aaPredicted RBP12.86□□□□□ -0.35
TNRC6A-205ENST00000464539 NTRK3Q16288 839 aa12.86□□□□□ -0.35
TNRC6A-205ENST00000464539 NAA35Q5VZE5 725 aa12.86□□□□□ -0.35
TNRC6A-205ENST00000464539 PPP4R3AQ6IN85 833 aa12.86□□□□□ -0.35
TNRC6A-205ENST00000464539 ZNF530Q6P9A1 599 aaPredicted RBP12.86□□□□□ -0.35
TNRC6A-205ENST00000464539 C6orf89Q6UWU4 347 aa12.86□□□□□ -0.35
TNRC6A-205ENST00000464539 ZNF473Q8WTR7 871 aaKnown RBP12.86□□□□□ -0.35
TNRC6A-205ENST00000464539 P3H4Q92791 437 aa12.86□□□□□ -0.35
TNRC6A-205ENST00000464539 ARHGEF1Q92888 912 aaKnown RBP12.86□□□□□ -0.35
TNRC6A-205ENST00000464539 OSBP2Q969R2 916 aa12.86□□□□□ -0.35
TNRC6A-205ENST00000464539 FAXDC2Q96IV6 333 aa12.86□□□□□ -0.35
TNRC6A-205ENST00000464539 PURBQ96QR8 312 aaKnown RBP12.86□□□□□ -0.35
TNRC6A-205ENST00000464539 HDAC6Q9UBN7 1215 aa12.86□□□□□ -0.35
TNRC6A-205ENST00000464539 GLTPD2A6NH11 291 aa12.85□□□□□ -0.35
TNRC6A-205ENST00000464539 ENC1O14682 589 aa12.85□□□□□ -0.35
TNRC6A-205ENST00000464539 PPP1R37O75864 691 aa12.85□□□□□ -0.35
TNRC6A-205ENST00000464539 CD44P16070 742 aaKnown RBP12.85□□□□□ -0.35
TNRC6A-205ENST00000464539 IL15P40933 162 aaPredicted RBP12.85□□□□□ -0.35
TNRC6A-205ENST00000464539 SLC8A3P57103 927 aa12.85□□□□□ -0.35
TNRC6A-205ENST00000464539 AIMP1Q12904 312 aaKnown RBP12.85□□□□□ -0.35
TNRC6A-205ENST00000464539 TTMPQ5BVD1 217 aa12.85□□□□□ -0.35
TNRC6A-205ENST00000464539 RC3H1Q5TC82 1133 aaKnown RBP12.85□□□□□ -0.35
TNRC6A-205ENST00000464539 AIFM3Q96NN9 605 aa12.85□□□□□ -0.35
TNRC6A-205ENST00000464539 PYM1Q9BRP8 204 aaKnown RBP12.85□□□□□ -0.35
TNRC6A-205ENST00000464539 SLC40A1Q9NP59 571 aa12.85□□□□□ -0.35
TNRC6A-205ENST00000464539 CAPN11Q9UMQ6 739 aa12.85□□□□□ -0.35
TNRC6A-205ENST00000464539 LUC7L2Q9Y383 392 aaKnown RBP12.85□□□□□ -0.35
TNRC6A-205ENST00000464539 DDX60Q8IY21 1712 aaKnown RBP12.85□□□□□ -0.35
TNRC6A-205ENST00000464539 IPO7O95373 1038 aaKnown RBP12.85□□□□□ -0.35
TNRC6A-205ENST00000464539 FMNL1O95466 1100 aaPredicted RBP12.85□□□□□ -0.35
TNRC6A-205ENST00000464539 FAM107AO95990 144 aa12.85□□□□□ -0.35
TNRC6A-205ENST00000464539 MMP1P03956 469 aa12.85□□□□□ -0.35
TNRC6A-205ENST00000464539 TOB1P50616 345 aaPredicted RBP12.85□□□□□ -0.35
TNRC6A-205ENST00000464539 HERVK_113P62684 666 aa12.85□□□□□ -0.35
TNRC6A-205ENST00000464539 DPYDQ12882 1025 aa12.85□□□□□ -0.35
TNRC6A-205ENST00000464539 PDCLQ13371 301 aa12.85□□□□□ -0.35
TNRC6A-205ENST00000464539 PTGISQ16647 500 aa12.85□□□□□ -0.35
TNRC6A-205ENST00000464539 C1orf141Q5JVX7 400 aa12.85□□□□□ -0.35
TNRC6A-205ENST00000464539 SPECC1Q5M775 1068 aa12.85□□□□□ -0.35
TNRC6A-205ENST00000464539 APOA5Q6Q788 366 aa12.85□□□□□ -0.35
TNRC6A-205ENST00000464539 KIAA1328Q86T90 577 aa12.85□□□□□ -0.35
TNRC6A-205ENST00000464539 SGMS1Q86VZ5 419 aa12.85□□□□□ -0.35
TNRC6A-205ENST00000464539 EGFL6Q8IUX8 553 aa12.85□□□□□ -0.35
TNRC6A-205ENST00000464539 PARP9Q8IXQ6 854 aa12.85□□□□□ -0.35
TNRC6A-205ENST00000464539 CCDC13Q8IYE1 715 aa12.85□□□□□ -0.35
TNRC6A-205ENST00000464539 ARFGAP2Q8N6H7 521 aa12.85□□□□□ -0.35
TNRC6A-205ENST00000464539 PAGE5Q96GU1 130 aa12.85□□□□□ -0.35
TNRC6A-205ENST00000464539 GDAP1L1Q96MZ0 367 aa12.85□□□□□ -0.35
TNRC6A-205ENST00000464539 NEUROD6Q96NK8 337 aa12.85□□□□□ -0.35
TNRC6A-205ENST00000464539 CHP1Q99653 195 aa12.85□□□□□ -0.35
TNRC6A-205ENST00000464539 MYD88Q99836 296 aa12.85□□□□□ -0.35
TNRC6A-205ENST00000464539 ATP6V0A4Q9HBG4 840 aa12.85□□□□□ -0.35
TNRC6A-205ENST00000464539 CNTNAP4Q9C0A0 1308 aa12.84□□□□□ -0.35
TNRC6A-205ENST00000464539 ZBTB43O43298 467 aa12.84□□□□□ -0.35
TNRC6A-205ENST00000464539 SRGAP2O75044 1071 aa12.84□□□□□ -0.35
TNRC6A-205ENST00000464539 ZMYND10O75800 440 aa12.84□□□□□ -0.35
TNRC6A-205ENST00000464539 BMP15O95972 392 aa12.84□□□□□ -0.35
TNRC6A-205ENST00000464539 STX17P56962 302 aa12.84□□□□□ -0.35
TNRC6A-205ENST00000464539 MEA1Q16626 185 aa12.84□□□□□ -0.35
TNRC6A-205ENST00000464539 NBPF9Q3BBW0 867 aa12.84□□□□□ -0.35
TNRC6A-205ENST00000464539 TCP11X2Q5H9J9 407 aa12.84□□□□□ -0.35
TNRC6A-205ENST00000464539 RNF187Q5TA31 235 aaPredicted RBP12.84□□□□□ -0.35
TNRC6A-205ENST00000464539 KLHL10Q6JEL2 608 aa12.84□□□□□ -0.35
TNRC6A-205ENST00000464539 CCDC121Q6ZUS5 278 aa12.84□□□□□ -0.35
TNRC6A-205ENST00000464539 MREGQ8N565 214 aa12.84□□□□□ -0.35
TNRC6A-205ENST00000464539 APPBP2Q92624 585 aa12.84□□□□□ -0.35
TNRC6A-205ENST00000464539 ARL8AQ96BM9 186 aa12.84□□□□□ -0.35
TNRC6A-205ENST00000464539 FAM212AQ96EL1 285 aa12.84□□□□□ -0.35
TNRC6A-205ENST00000464539 CAPZA3Q96KX2 299 aa12.84□□□□□ -0.35
TNRC6A-205ENST00000464539 NUP58Q9BVL2 599 aa12.84□□□□□ -0.35
TNRC6A-205ENST00000464539 TRIM6Q9C030 488 aaPredicted RBP12.84□□□□□ -0.35
TNRC6A-205ENST00000464539 BATF3Q9NR55 127 aa12.84□□□□□ -0.35
TNRC6A-205ENST00000464539 CREBZFQ9NS37 354 aa12.84□□□□□ -0.35
TNRC6A-205ENST00000464539 HMGB1P1B2RPK0 211 aaPredicted RBP12.83□□□□□ -0.36
TNRC6A-205ENST00000464539 H7C1D1 291 aa12.83□□□□□ -0.36
TNRC6A-205ENST00000464539 PDE2AO00408 941 aaPredicted RBP12.83□□□□□ -0.36
TNRC6A-205ENST00000464539 FOXP2O15409 715 aa12.83□□□□□ -0.36
TNRC6A-205ENST00000464539 RPS6KA4O75676 772 aa12.83□□□□□ -0.36
TNRC6A-205ENST00000464539 TCP1P17987 556 aaKnown RBP12.83□□□□□ -0.36
TNRC6A-205ENST00000464539 MDH1P40925 334 aaKnown RBP12.83□□□□□ -0.36
TNRC6A-205ENST00000464539 CDK17Q00537 523 aa12.83□□□□□ -0.36
TNRC6A-205ENST00000464539 NBPF20Q3BBV1 942 aa12.83□□□□□ -0.36
TNRC6A-205ENST00000464539 ARMC9Q7Z3E5 817 aa12.83□□□□□ -0.36
TNRC6A-205ENST00000464539 NLRP14Q86W24 1093 aa12.83□□□□□ -0.36
TNRC6A-205ENST00000464539 GRAMD1CQ8IYS0 662 aa12.83□□□□□ -0.36
TNRC6A-205ENST00000464539 IQCKQ8N0W5 287 aa12.83□□□□□ -0.36
TNRC6A-205ENST00000464539 CCDC155Q8N6L0 562 aa12.83□□□□□ -0.36
TNRC6A-205ENST00000464539 RETREG2Q8NC44 543 aa12.83□□□□□ -0.36
TNRC6A-205ENST00000464539 TRIM58Q8NG06 486 aa12.83□□□□□ -0.36
TNRC6A-205ENST00000464539 SGSM3Q96HU1 749 aa12.83□□□□□ -0.36
TNRC6A-205ENST00000464539 ABCC12Q96J65 1359 aa12.83□□□□□ -0.36
TNRC6A-205ENST00000464539 CCT8L2Q96SF2 557 aa12.83□□□□□ -0.36
TNRC6A-205ENST00000464539 ZNHIT6Q9NWK9 470 aaKnown RBP12.83□□□□□ -0.36
TNRC6A-205ENST00000464539 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.83□□□□□ -0.36
TNRC6A-205ENST00000464539 SNX12Q9UMY4 172 aa12.83□□□□□ -0.36
TNRC6A-205ENST00000464539 SBF1O95248 1867 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms