RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 FCER1AP12319 257 aa20.69■□□□□ 0.9
VPS52-214ENST00000463486 RGS19P49795 217 aa20.69■□□□□ 0.9
VPS52-214ENST00000463486 SART3Q15020 963 aaKnown RBP20.69■□□□□ 0.9
VPS52-214ENST00000463486 ASPRV1Q53RT3 343 aa20.69■□□□□ 0.9
VPS52-214ENST00000463486 DNAJC25-GNG10A0A024R161 153 aa20.68■□□□□ 0.9
VPS52-214ENST00000463486 MYCP01106 439 aaPredicted RBP20.68■□□□□ 0.9
VPS52-214ENST00000463486 ICAM1P05362 532 aa20.68■□□□□ 0.9
VPS52-214ENST00000463486 PARP1P09874 1014 aaKnown RBP20.68■□□□□ 0.9
VPS52-214ENST00000463486 CCL5P13501 91 aa20.68■□□□□ 0.9
VPS52-214ENST00000463486 TAL1P17542 331 aaPredicted RBP20.68■□□□□ 0.9
VPS52-214ENST00000463486 LIFRP42702 1097 aa20.68■□□□□ 0.9
VPS52-214ENST00000463486 GRM4Q14833 912 aa20.68■□□□□ 0.9
VPS52-214ENST00000463486 CCDC174Q6PII3 467 aa20.68■□□□□ 0.9
VPS52-214ENST00000463486 CHST13Q8NET6 341 aa20.68■□□□□ 0.9
VPS52-214ENST00000463486 TMEM87BQ96K49 555 aa20.68■□□□□ 0.9
VPS52-214ENST00000463486 LRRC2Q9BYS8 371 aa20.68■□□□□ 0.9
VPS52-214ENST00000463486 UNC93B1Q9H1C4 597 aa20.68■□□□□ 0.9
VPS52-214ENST00000463486 CWC22Q9HCG8 908 aaKnown RBP20.68■□□□□ 0.9
VPS52-214ENST00000463486 WDR19Q8NEZ3 1342 aa20.68■□□□□ 0.9
VPS52-214ENST00000463486 ZNFX1Q9P2E3 1918 aaKnown RBP20.68■□□□□ 0.9
VPS52-214ENST00000463486 MKI67P46013 3256 aaKnown RBP20.68■□□□□ 0.9
VPS52-214ENST00000463486 ERICH2A1L162 156 aa20.67■□□□□ 0.9
VPS52-214ENST00000463486 PGK2P07205 417 aa20.67■□□□□ 0.9
VPS52-214ENST00000463486 ZKSCAN1P17029 563 aaPredicted RBP20.67■□□□□ 0.9
VPS52-214ENST00000463486 KRT32Q14532 448 aa20.67■□□□□ 0.9
VPS52-214ENST00000463486 ZNF792Q3KQV3 632 aa20.67■□□□□ 0.9
VPS52-214ENST00000463486 DHX32Q7L7V1 743 aaKnown RBP20.67■□□□□ 0.9
VPS52-214ENST00000463486 TRMT44Q8IYL2 757 aaKnown RBP20.67■□□□□ 0.9
VPS52-214ENST00000463486 ADGRF4Q8IZF3 695 aa20.67■□□□□ 0.9
VPS52-214ENST00000463486 MMP19Q99542 508 aa20.67■□□□□ 0.9
VPS52-214ENST00000463486 JMJD4Q9H9V9 463 aa20.67■□□□□ 0.9
VPS52-214ENST00000463486 UBXN2AP68543 259 aa20.66■□□□□ 0.9
VPS52-214ENST00000463486 CACNB2Q08289 660 aaPredicted RBP20.66■□□□□ 0.9
VPS52-214ENST00000463486 TKFCQ3LXA3 575 aa20.66■□□□□ 0.9
VPS52-214ENST00000463486 MUM1L1Q5H9M0 696 aa20.66■□□□□ 0.9
VPS52-214ENST00000463486 DPP9Q86TI2 863 aa20.66■□□□□ 0.9
VPS52-214ENST00000463486 SGMS1Q86VZ5 419 aa20.66■□□□□ 0.9
VPS52-214ENST00000463486 MTMR8Q96EF0 704 aa20.66■□□□□ 0.9
VPS52-214ENST00000463486 FGD4Q96M96 766 aa20.66■□□□□ 0.9
VPS52-214ENST00000463486 TRERF1Q96PN7 1200 aa20.66■□□□□ 0.9
VPS52-214ENST00000463486 MAP3K14Q99558 947 aa20.66■□□□□ 0.9
VPS52-214ENST00000463486 PAK6Q9NQU5 681 aaPredicted RBP20.66■□□□□ 0.9
VPS52-214ENST00000463486 BIN2Q9UBW5 565 aaPredicted RBP20.66■□□□□ 0.9
VPS52-214ENST00000463486 CTDP1Q9Y5B0 961 aaPredicted RBP20.66■□□□□ 0.9
VPS52-214ENST00000463486 RBBP6Q7Z6E9 1792 aaKnown RBP20.66■□□□□ 0.9
VPS52-214ENST00000463486 KLRF2D3W0D1 207 aa20.65■□□□□ 0.9
VPS52-214ENST00000463486 CPA1P15085 419 aa20.65■□□□□ 0.9
VPS52-214ENST00000463486 SLC4A3P48751 1232 aa20.65■□□□□ 0.9
VPS52-214ENST00000463486 KCTD2Q14681 263 aa20.65■□□□□ 0.9
VPS52-214ENST00000463486 OLFML2BQ68BL8 750 aa20.65■□□□□ 0.9
VPS52-214ENST00000463486 ZNF654Q8IZM8 581 aa20.65■□□□□ 0.9
VPS52-214ENST00000463486 TMTC2Q8N394 836 aa20.65■□□□□ 0.9
VPS52-214ENST00000463486 MAML3Q96JK9 1138 aa20.65■□□□□ 0.9
VPS52-214ENST00000463486 TCEANC2Q96MN5 208 aa20.65■□□□□ 0.9
VPS52-214ENST00000463486 RNF146Q9NTX7 359 aa20.65■□□□□ 0.9
VPS52-214ENST00000463486 FBXO40Q9UH90 709 aa20.65■□□□□ 0.9
VPS52-214ENST00000463486 DIS3Q9Y2L1 958 aaKnown RBP20.65■□□□□ 0.9
VPS52-214ENST00000463486 CYTH3O43739 400 aa20.64■□□□□ 0.89
VPS52-214ENST00000463486 SEC24BO95487 1268 aa20.64■□□□□ 0.89
VPS52-214ENST00000463486 GJB1P08034 283 aa20.64■□□□□ 0.89
VPS52-214ENST00000463486 ALAS1P13196 640 aa20.64■□□□□ 0.89
VPS52-214ENST00000463486 PRKAR2AP13861 404 aaKnown RBP20.64■□□□□ 0.89
VPS52-214ENST00000463486 CATIPQ7Z7H3 387 aa20.64■□□□□ 0.89
VPS52-214ENST00000463486 CLEC4DQ8WXI8 215 aa20.64■□□□□ 0.89
VPS52-214ENST00000463486 MYL10Q9BUA6 226 aa20.64■□□□□ 0.89
VPS52-214ENST00000463486 ACAD9Q9H845 621 aa20.64■□□□□ 0.89
VPS52-214ENST00000463486 HOMER2Q9NSB8 354 aa20.64■□□□□ 0.89
VPS52-214ENST00000463486 CCPG1Q9ULG6 757 aa20.64■□□□□ 0.89
VPS52-214ENST00000463486 RPTORQ8N122 1335 aa20.63■□□□□ 0.89
VPS52-214ENST00000463486 DDAH1O94760 285 aa20.63■□□□□ 0.89
VPS52-214ENST00000463486 EN2P19622 333 aaPredicted RBP20.63■□□□□ 0.89
VPS52-214ENST00000463486 CYP2C19P33261 490 aa20.63■□□□□ 0.89
VPS52-214ENST00000463486 TRPV1Q8NER1 839 aa20.63■□□□□ 0.89
VPS52-214ENST00000463486 SHISA4Q96DD7 197 aa20.63■□□□□ 0.89
VPS52-214ENST00000463486 JAKMIP1Q96N16 626 aaKnown RBP20.63■□□□□ 0.89
VPS52-214ENST00000463486 RNF208Q9H0X6 261 aa20.63■□□□□ 0.89
VPS52-214ENST00000463486 RIOX1Q9H6W3 641 aa20.63■□□□□ 0.89
VPS52-214ENST00000463486 A1CFQ9NQ94 594 aaKnown RBP20.63■□□□□ 0.89
VPS52-214ENST00000463486 BRPF3Q9ULD4 1205 aa20.63■□□□□ 0.89
VPS52-214ENST00000463486 TNRC18O15417 2968 aaPredicted RBP20.62■□□□□ 0.89
VPS52-214ENST00000463486 PPP1R11O60927 126 aaPredicted RBP20.62■□□□□ 0.89
VPS52-214ENST00000463486 HMGB1P09429 215 aaKnown RBP20.62■□□□□ 0.89
VPS52-214ENST00000463486 CDC37Q16543 378 aaPredicted RBP20.62■□□□□ 0.89
VPS52-214ENST00000463486 QRICH1Q2TAL8 776 aa20.62■□□□□ 0.89
VPS52-214ENST00000463486 FBXL16Q8N461 479 aa20.62■□□□□ 0.89
VPS52-214ENST00000463486 FAM133AQ8N9E0 248 aa20.62■□□□□ 0.89
VPS52-214ENST00000463486 TMEM106CQ9BVX2 250 aa20.62■□□□□ 0.89
VPS52-214ENST00000463486 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.62■□□□□ 0.89
VPS52-214ENST00000463486 ASTN1O14525 1302 aa20.61■□□□□ 0.89
VPS52-214ENST00000463486 NFIBO00712 420 aa20.61■□□□□ 0.89
VPS52-214ENST00000463486 CCND3P30281 292 aaPredicted RBP20.61■□□□□ 0.89
VPS52-214ENST00000463486 GJA8P48165 433 aa20.61■□□□□ 0.89
VPS52-214ENST00000463486 CNTN2Q02246 1040 aa20.61■□□□□ 0.89
VPS52-214ENST00000463486 ANKRD35Q8N283 1001 aa20.61■□□□□ 0.89
VPS52-214ENST00000463486 DDX11Q96FC9 970 aa20.61■□□□□ 0.89
VPS52-214ENST00000463486 AGXT2Q9BYV1 514 aa20.61■□□□□ 0.89
VPS52-214ENST00000463486 CRISPLD2Q9H0B8 497 aa20.61■□□□□ 0.89
VPS52-214ENST00000463486 VAT1LQ9HCJ6 419 aa20.61■□□□□ 0.89
VPS52-214ENST00000463486 SLC5A4Q9NY91 659 aa20.61■□□□□ 0.89
VPS52-214ENST00000463486 CYP39A1Q9NYL5 469 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms