RNA–Protein interactions for RNA: ENST00000463455.1

RTCB-202, Transcript of RNA 2',3'-cyclic phosphate and 5'-OH ligase, humanhuman

TSL 2

Gene RTCB, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCB-202ENST00000463455 PLXNA1Q9UIW2 1896 aa14.06□□□□□ -0.16
RTCB-202ENST00000463455 CNGA1P29973 690 aa14.06□□□□□ -0.16
RTCB-202ENST00000463455 TKFCQ3LXA3 575 aa14.06□□□□□ -0.16
RTCB-202ENST00000463455 STAG1Q8WVM7 1258 aa14.06□□□□□ -0.16
RTCB-202ENST00000463455 TINF2Q9BSI4 451 aa14.06□□□□□ -0.16
RTCB-202ENST00000463455 DIAPH3Q9NSV4 1193 aa14.06□□□□□ -0.16
RTCB-202ENST00000463455 PCDH10Q9P2E7 1040 aa14.06□□□□□ -0.16
RTCB-202ENST00000463455 SYNGAP1Q96PV0 1343 aa14.06□□□□□ -0.16
RTCB-202ENST00000463455 DNAJC25-GNG10A0A024R161 153 aa14.05□□□□□ -0.16
RTCB-202ENST00000463455 TMEM232C9JQI7 657 aa14.05□□□□□ -0.16
RTCB-202ENST00000463455 RANBP6O60518 1105 aaKnown RBP14.05□□□□□ -0.16
RTCB-202ENST00000463455 MAMDC4Q6UXC1 1216 aa14.05□□□□□ -0.16
RTCB-202ENST00000463455 DCAF4Q8WV16 495 aa14.05□□□□□ -0.16
RTCB-202ENST00000463455 DDX11Q96FC9 970 aa14.05□□□□□ -0.16
RTCB-202ENST00000463455 TTC14Q96N46 770 aa14.05□□□□□ -0.16
RTCB-202ENST00000463455 HAX1O00165 279 aa14.04□□□□□ -0.16
RTCB-202ENST00000463455 TOP1P11387 765 aaKnown RBP14.04□□□□□ -0.16
RTCB-202ENST00000463455 BMP8BP34820 402 aa14.04□□□□□ -0.16
RTCB-202ENST00000463455 FXR1P51114 621 aaKnown RBP eCLIP14.04□□□□□ -0.16
RTCB-202ENST00000463455 AKNAD1Q5T1N1 836 aa14.04□□□□□ -0.16
RTCB-202ENST00000463455 MFSD6Q6ZSS7 791 aa14.04□□□□□ -0.16
RTCB-202ENST00000463455 C7orf61Q8IZ16 206 aa14.04□□□□□ -0.16
RTCB-202ENST00000463455 CPXCR1Q8N123 301 aa14.04□□□□□ -0.16
RTCB-202ENST00000463455 DSCC1Q9BVC3 393 aa14.04□□□□□ -0.16
RTCB-202ENST00000463455 RBM27Q9P2N5 1060 aaKnown RBP14.04□□□□□ -0.16
RTCB-202ENST00000463455 PNMA2Q9UL42 364 aa14.04□□□□□ -0.16
RTCB-202ENST00000463455 CNPY2Q9Y2B0 182 aa14.04□□□□□ -0.16
RTCB-202ENST00000463455 LAMA4Q16363 1823 aa14.04□□□□□ -0.16
RTCB-202ENST00000463455 KBTBD13C9JR72 458 aa14.03□□□□□ -0.16
RTCB-202ENST00000463455 PGK2P07205 417 aa14.03□□□□□ -0.16
RTCB-202ENST00000463455 RARBP10826 455 aa14.03□□□□□ -0.16
RTCB-202ENST00000463455 AKR1A1P14550 325 aa14.03□□□□□ -0.16
RTCB-202ENST00000463455 MCCP23508 829 aa14.03□□□□□ -0.16
RTCB-202ENST00000463455 IKQ13123 557 aaPredicted RBP14.03□□□□□ -0.16
RTCB-202ENST00000463455 CCDC178Q5BJE1 867 aa14.03□□□□□ -0.16
RTCB-202ENST00000463455 BTNL9Q6UXG8 535 aa14.03□□□□□ -0.16
RTCB-202ENST00000463455 ESR2Q92731 530 aa14.03□□□□□ -0.16
RTCB-202ENST00000463455 ACAD9Q9H845 621 aa14.03□□□□□ -0.16
RTCB-202ENST00000463455 RAVER2Q9HCJ3 691 aaKnown RBP14.03□□□□□ -0.16
RTCB-202ENST00000463455 TOMM22Q9NS69 142 aa14.03□□□□□ -0.16
RTCB-202ENST00000463455 RIPK3Q9Y572 518 aa14.03□□□□□ -0.16
RTCB-202ENST00000463455 TACC3Q9Y6A5 838 aa14.03□□□□□ -0.16
RTCB-202ENST00000463455 RAD50Q92878 1312 aa14.02□□□□□ -0.17
RTCB-202ENST00000463455 ZNF213O14771 459 aa14.02□□□□□ -0.17
RTCB-202ENST00000463455 NMT2O60551 498 aa14.02□□□□□ -0.17
RTCB-202ENST00000463455 C1orf53Q5VUE5 145 aa14.02□□□□□ -0.17
RTCB-202ENST00000463455 ANKRD35Q8N283 1001 aa14.02□□□□□ -0.17
RTCB-202ENST00000463455 GDF15Q99988 308 aa14.02□□□□□ -0.17
RTCB-202ENST00000463455 INCENPQ9NQS7 918 aa14.02□□□□□ -0.17
RTCB-202ENST00000463455 CTNNA3Q9UI47 895 aa14.02□□□□□ -0.17
RTCB-202ENST00000463455 RANBP2P49792 3224 aaKnown RBP14.02□□□□□ -0.17
RTCB-202ENST00000463455 ZNF536O15090 1300 aa14.01□□□□□ -0.17
RTCB-202ENST00000463455 ZNF865P0CJ78 1059 aaPredicted RBP14.01□□□□□ -0.17
RTCB-202ENST00000463455 SNX17Q15036 470 aa14.01□□□□□ -0.17
RTCB-202ENST00000463455 LRRC26Q2I0M4 334 aa14.01□□□□□ -0.17
RTCB-202ENST00000463455 RRP12Q5JTH9 1297 aaKnown RBP14.01□□□□□ -0.17
RTCB-202ENST00000463455 CWC27Q6UX04 472 aaKnown RBP14.01□□□□□ -0.17
RTCB-202ENST00000463455 RNF180Q86T96 592 aa14.01□□□□□ -0.17
RTCB-202ENST00000463455 DGKHQ86XP1 1220 aa14.01□□□□□ -0.17
RTCB-202ENST00000463455 TMEM47Q9BQJ4 181 aa14.01□□□□□ -0.17
RTCB-202ENST00000463455 SENP6Q9GZR1 1112 aaPredicted RBP14.01□□□□□ -0.17
RTCB-202ENST00000463455 XPNPEP3Q9NQH7 507 aa14.01□□□□□ -0.17
RTCB-202ENST00000463455 PRR12Q9ULL5 1215 aa14.01□□□□□ -0.17
RTCB-202ENST00000463455 ISY1Q9ULR0 285 aaKnown RBP14.01□□□□□ -0.17
RTCB-202ENST00000463455 LOC102724159A0A0B4J2E5 919 aa14□□□□□ -0.17
RTCB-202ENST00000463455 ICAM1P05362 532 aa14□□□□□ -0.17
RTCB-202ENST00000463455 SNHG28P0DPA3 235 aa14□□□□□ -0.17
RTCB-202ENST00000463455 HAND2P61296 217 aa14□□□□□ -0.17
RTCB-202ENST00000463455 PWP2Q15269 919 aaKnown RBP14□□□□□ -0.17
RTCB-202ENST00000463455 LRRC41Q15345 812 aa14□□□□□ -0.17
RTCB-202ENST00000463455 IMMTQ16891 758 aaKnown RBP14□□□□□ -0.17
RTCB-202ENST00000463455 CCDC96Q2M329 555 aa14□□□□□ -0.17
RTCB-202ENST00000463455 PRAMEF19Q5SWL8 479 aa14□□□□□ -0.17
RTCB-202ENST00000463455 TTC22Q5TAA0 569 aa14□□□□□ -0.17
RTCB-202ENST00000463455 KCTD1Q719H9 257 aa14□□□□□ -0.17
RTCB-202ENST00000463455 IQCA1Q86XH1 822 aa14□□□□□ -0.17
RTCB-202ENST00000463455 TBC1D10CQ8IV04 446 aa14□□□□□ -0.17
RTCB-202ENST00000463455 MS4A3Q96HJ5 214 aa14□□□□□ -0.17
RTCB-202ENST00000463455 RANBP17Q9H2T7 1088 aaKnown RBP14□□□□□ -0.17
RTCB-202ENST00000463455 ABHD16BQ9H3Z7 469 aa14□□□□□ -0.17
RTCB-202ENST00000463455 RNF146Q9NTX7 359 aa14□□□□□ -0.17
RTCB-202ENST00000463455 FAM184BQ9ULE4 1060 aa14□□□□□ -0.17
RTCB-202ENST00000463455 SMCHD1A6NHR9 2005 aa14□□□□□ -0.17
RTCB-202ENST00000463455 POTEB2H3BUK9 544 aa13.99□□□□□ -0.17
RTCB-202ENST00000463455 GTPBP6O43824 516 aaPredicted RBP13.99□□□□□ -0.17
RTCB-202ENST00000463455 PDHBP11177 359 aa13.99□□□□□ -0.17
RTCB-202ENST00000463455 GPATCH4Q5T3I0 446 aaKnown RBP13.99□□□□□ -0.17
RTCB-202ENST00000463455 GJC2Q5T442 439 aaPredicted RBP13.99□□□□□ -0.17
RTCB-202ENST00000463455 FAM133AQ8N9E0 248 aa13.99□□□□□ -0.17
RTCB-202ENST00000463455 RUFY2Q8WXA3 655 aa13.99□□□□□ -0.17
RTCB-202ENST00000463455 TRERF1Q96PN7 1200 aa13.99□□□□□ -0.17
RTCB-202ENST00000463455 TSEN34Q9BSV6 310 aaKnown RBP13.99□□□□□ -0.17
RTCB-202ENST00000463455 MAF1Q9H063 256 aa13.99□□□□□ -0.17
RTCB-202ENST00000463455 CNNM2Q9H8M5 875 aa13.99□□□□□ -0.17
RTCB-202ENST00000463455 A1CFQ9NQ94 594 aaKnown RBP13.99□□□□□ -0.17
RTCB-202ENST00000463455 ZMYND8Q9ULU4 1186 aaPredicted RBP13.99□□□□□ -0.17
RTCB-202ENST00000463455 PHF24Q9UPV7 400 aa13.99□□□□□ -0.17
RTCB-202ENST00000463455 TRPC6Q9Y210 931 aa13.99□□□□□ -0.17
RTCB-202ENST00000463455 WDR19Q8NEZ3 1342 aa13.98□□□□□ -0.17
RTCB-202ENST00000463455 ASB14A6NK59 587 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms