RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 SHTN1A0MZ66 631 aa14.56□□□□□ -0.08
VAPB-203ENST00000463370 CCNT1O60563 726 aaKnown RBP14.56□□□□□ -0.08
VAPB-203ENST00000463370 GH2P01242 217 aa14.56□□□□□ -0.08
VAPB-203ENST00000463370 ICA1Q05084 483 aa14.56□□□□□ -0.08
VAPB-203ENST00000463370 NONOQ15233 471 aaKnown RBP eCLIP14.56□□□□□ -0.08
VAPB-203ENST00000463370 ABCB5Q2M3G0 1257 aa14.56□□□□□ -0.08
VAPB-203ENST00000463370 REXO1Q8N1G1 1221 aaKnown RBP14.56□□□□□ -0.08
VAPB-203ENST00000463370 MED15Q96RN5 788 aa14.56□□□□□ -0.08
VAPB-203ENST00000463370 NUP88Q99567 741 aaPredicted RBP14.56□□□□□ -0.08
VAPB-203ENST00000463370 ZNF70Q9UC06 446 aaPredicted RBP14.56□□□□□ -0.08
VAPB-203ENST00000463370 HOOK1Q9UJC3 728 aaKnown RBP14.56□□□□□ -0.08
VAPB-203ENST00000463370 PNMA6FA0A0J9YX94 578 aa14.55□□□□□ -0.08
VAPB-203ENST00000463370 ESYT2A0FGR8 921 aa14.55□□□□□ -0.08
VAPB-203ENST00000463370 IKBKBO14920 756 aa14.55□□□□□ -0.08
VAPB-203ENST00000463370 CDC25BP30305 580 aa14.55□□□□□ -0.08
VAPB-203ENST00000463370 KARSQ15046 597 aaKnown RBP14.55□□□□□ -0.08
VAPB-203ENST00000463370 UBE2SQ16763 222 aa14.55□□□□□ -0.08
VAPB-203ENST00000463370 GRIPAP1Q4V328 841 aa14.55□□□□□ -0.08
VAPB-203ENST00000463370 GPATCH4Q5T3I0 446 aaKnown RBP14.55□□□□□ -0.08
VAPB-203ENST00000463370 PDXDC2PQ6P474 469 aa14.55□□□□□ -0.08
VAPB-203ENST00000463370 KRT25Q7Z3Z0 450 aa14.55□□□□□ -0.08
VAPB-203ENST00000463370 NYAP2Q9P242 653 aa14.55□□□□□ -0.08
VAPB-203ENST00000463370 PPP1R1BQ9UD71 204 aaPredicted RBP14.55□□□□□ -0.08
VAPB-203ENST00000463370 SCAF8Q9UPN6 1271 aaKnown RBP14.55□□□□□ -0.08
VAPB-203ENST00000463370 CNTNAP1P78357 1384 aa14.55□□□□□ -0.08
VAPB-203ENST00000463370 LONP1P36776 959 aaKnown RBP14.55□□□□□ -0.08
VAPB-203ENST00000463370 DPYDQ12882 1025 aa14.55□□□□□ -0.08
VAPB-203ENST00000463370 DLGAP5Q15398 846 aa14.55□□□□□ -0.08
VAPB-203ENST00000463370 SLFN13Q68D06 897 aa14.55□□□□□ -0.08
VAPB-203ENST00000463370 KANK3Q6NY19 840 aa14.55□□□□□ -0.08
VAPB-203ENST00000463370 TMEM179Q6ZVK1 233 aa14.55□□□□□ -0.08
VAPB-203ENST00000463370 FAM177A1Q8N128 213 aaPredicted RBP14.55□□□□□ -0.08
VAPB-203ENST00000463370 LRRC15Q8TF66 581 aa14.55□□□□□ -0.08
VAPB-203ENST00000463370 MTMR8Q96EF0 704 aa14.55□□□□□ -0.08
VAPB-203ENST00000463370 XPO4Q9C0E2 1151 aaKnown RBP14.55□□□□□ -0.08
VAPB-203ENST00000463370 BLZF1Q9H2G9 400 aa14.55□□□□□ -0.08
VAPB-203ENST00000463370 IFNKQ9P0W0 207 aa14.55□□□□□ -0.08
VAPB-203ENST00000463370 PIM2Q9P1W9 311 aa14.55□□□□□ -0.08
VAPB-203ENST00000463370 ZNRF3Q9ULT6 936 aa14.55□□□□□ -0.08
VAPB-203ENST00000463370 A0A1W2PRG0 241 aa14.54□□□□□ -0.08
VAPB-203ENST00000463370 GOLGA6L6A8MZA4 724 aa14.54□□□□□ -0.08
VAPB-203ENST00000463370 SLC1A4P43007 532 aa14.54□□□□□ -0.08
VAPB-203ENST00000463370 SNAP25P60880 206 aa14.54□□□□□ -0.08
VAPB-203ENST00000463370 MYL5Q02045 173 aa14.54□□□□□ -0.08
VAPB-203ENST00000463370 CXCL9Q07325 125 aa14.54□□□□□ -0.08
VAPB-203ENST00000463370 HSP90AA4PQ58FG1 418 aa14.54□□□□□ -0.08
VAPB-203ENST00000463370 DTHD1Q6ZMT9 781 aa14.54□□□□□ -0.08
VAPB-203ENST00000463370 NEK8Q86SG6 692 aa14.54□□□□□ -0.08
VAPB-203ENST00000463370 TRMT44Q8IYL2 757 aaKnown RBP14.54□□□□□ -0.08
VAPB-203ENST00000463370 FANCLQ9NW38 375 aa14.54□□□□□ -0.08
VAPB-203ENST00000463370 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.54□□□□□ -0.08
VAPB-203ENST00000463370 MYH8P13535 1937 aa14.54□□□□□ -0.08
VAPB-203ENST00000463370 F5H6K3 240 aa14.54□□□□□ -0.08
VAPB-203ENST00000463370 ZBTB5O15062 677 aa14.54□□□□□ -0.08
VAPB-203ENST00000463370 ADCY7P51828 1080 aa14.54□□□□□ -0.08
VAPB-203ENST00000463370 KLRC3Q07444 240 aa14.54□□□□□ -0.08
VAPB-203ENST00000463370 NIM1KQ8IY84 436 aa14.54□□□□□ -0.08
VAPB-203ENST00000463370 SMYD4Q8IYR2 804 aaPredicted RBP14.54□□□□□ -0.08
VAPB-203ENST00000463370 OGFOD1Q8N543 542 aa14.54□□□□□ -0.08
VAPB-203ENST00000463370 CACTINQ8WUQ7 758 aaKnown RBP14.54□□□□□ -0.08
VAPB-203ENST00000463370 PLIN2Q99541 437 aa14.54□□□□□ -0.08
VAPB-203ENST00000463370 TMEM39BQ9GZU3 492 aa14.54□□□□□ -0.08
VAPB-203ENST00000463370 VEZTQ9HBM0 779 aa14.54□□□□□ -0.08
VAPB-203ENST00000463370 SMTNL1A8MU46 457 aa14.53□□□□□ -0.08
VAPB-203ENST00000463370 hCG_1984214I3L0E3 225 aa14.53□□□□□ -0.08
VAPB-203ENST00000463370 SMC2O95347 1197 aa14.53□□□□□ -0.08
VAPB-203ENST00000463370 CD44P16070 742 aaKnown RBP14.53□□□□□ -0.08
VAPB-203ENST00000463370 TAL1P17542 331 aaPredicted RBP14.53□□□□□ -0.08
VAPB-203ENST00000463370 SPDYE2Q495Y8 402 aa14.53□□□□□ -0.08
VAPB-203ENST00000463370 NAALADL2Q58DX5 795 aa14.53□□□□□ -0.08
VAPB-203ENST00000463370 POTEDQ86YR6 584 aa14.53□□□□□ -0.08
VAPB-203ENST00000463370 ZNF713Q8N859 430 aaPredicted RBP14.53□□□□□ -0.08
VAPB-203ENST00000463370 IQUBQ8NA54 791 aa14.53□□□□□ -0.08
VAPB-203ENST00000463370 DPF2Q92785 391 aa14.53□□□□□ -0.08
VAPB-203ENST00000463370 NDUFB10O96000 172 aa14.53□□□□□ -0.08
VAPB-203ENST00000463370 TGFB2P61812 414 aa14.53□□□□□ -0.08
VAPB-203ENST00000463370 CUL4BQ13620 913 aa14.53□□□□□ -0.08
VAPB-203ENST00000463370 QRICH1Q2TAL8 776 aa14.53□□□□□ -0.08
VAPB-203ENST00000463370 FILIP1Q7Z7B0 1213 aa14.53□□□□□ -0.08
VAPB-203ENST00000463370 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.53□□□□□ -0.08
VAPB-203ENST00000463370 NFKBIEO00221 500 aa14.52□□□□□ -0.08
VAPB-203ENST00000463370 SLC37A4O43826 429 aa14.52□□□□□ -0.08
VAPB-203ENST00000463370 NEMFO60524 1076 aa14.52□□□□□ -0.08
VAPB-203ENST00000463370 TDP2O95551 362 aa14.52□□□□□ -0.08
VAPB-203ENST00000463370 ECE1P42892 770 aa14.52□□□□□ -0.08
VAPB-203ENST00000463370 PTPN21Q16825 1174 aa14.52□□□□□ -0.08
VAPB-203ENST00000463370 NBPF9Q3BBW0 867 aa14.52□□□□□ -0.08
VAPB-203ENST00000463370 DALRD3Q5D0E6 543 aaKnown RBP14.52□□□□□ -0.08
VAPB-203ENST00000463370 RBM26Q5T8P6 1007 aaKnown RBP14.52□□□□□ -0.08
VAPB-203ENST00000463370 SPICE1Q8N0Z3 855 aa14.52□□□□□ -0.08
VAPB-203ENST00000463370 RIC8AQ9NPQ8 531 aa14.52□□□□□ -0.08
VAPB-203ENST00000463370 DISC1Q9NRI5 854 aa14.52□□□□□ -0.08
VAPB-203ENST00000463370 TMOD2Q9NZR1 351 aa14.52□□□□□ -0.08
VAPB-203ENST00000463370 HDAC9Q9UKV0 1011 aa14.52□□□□□ -0.08
VAPB-203ENST00000463370 EGFRP00533 1210 aa14.52□□□□□ -0.09
VAPB-203ENST00000463370 OR52Z1P0C646 297 aa14.52□□□□□ -0.09
VAPB-203ENST00000463370 CLK2P49760 499 aaKnown RBP14.52□□□□□ -0.09
VAPB-203ENST00000463370 FANCCQ00597 558 aa14.52□□□□□ -0.09
VAPB-203ENST00000463370 KIAA1755Q5JYT7 1200 aa14.52□□□□□ -0.09
VAPB-203ENST00000463370 MIGA2Q7L4E1 593 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms