RNA–Protein interactions for RNA: ENST00000462777.1

HLA-F-222, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 779 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-222ENST00000462777 ARMCX2Q7L311 632 aa23.67■■□□□ 1.38
HLA-F-222ENST00000462777 ZNFX1Q9P2E3 1918 aaKnown RBP23.67■■□□□ 1.38
HLA-F-222ENST00000462777 LTBP2Q14767 1821 aa23.66■■□□□ 1.38
HLA-F-222ENST00000462777 PARP14Q460N5 1801 aa23.66■■□□□ 1.38
HLA-F-222ENST00000462777 TMEM265A0A087WTH1 108 aa23.66■■□□□ 1.38
HLA-F-222ENST00000462777 TMEM232C9JQI7 657 aa23.66■■□□□ 1.38
HLA-F-222ENST00000462777 CST5P28325 142 aaPredicted RBP23.66■■□□□ 1.38
HLA-F-222ENST00000462777 STAT2P52630 851 aa23.66■■□□□ 1.38
HLA-F-222ENST00000462777 CCDC144BQ3MJ40 725 aa23.66■■□□□ 1.38
HLA-F-222ENST00000462777 FAM160B2Q86V87 743 aa23.66■■□□□ 1.38
HLA-F-222ENST00000462777 MAFAQ8NHW3 353 aaPredicted RBP23.66■■□□□ 1.38
HLA-F-222ENST00000462777 ACAD9Q9H845 621 aa23.66■■□□□ 1.38
HLA-F-222ENST00000462777 HOMER2Q9NSB8 354 aa23.66■■□□□ 1.38
HLA-F-222ENST00000462777 COL11A1P12107 1806 aaPredicted RBP23.66■■□□□ 1.38
HLA-F-222ENST00000462777 SMCHD1A6NHR9 2005 aa23.66■■□□□ 1.38
HLA-F-222ENST00000462777 TIMP1P01033 207 aa23.65■■□□□ 1.38
HLA-F-222ENST00000462777 SLC1A4P43007 532 aa23.65■■□□□ 1.38
HLA-F-222ENST00000462777 PPARAQ07869 468 aa23.65■■□□□ 1.38
HLA-F-222ENST00000462777 GNASQ5JWF2 1037 aa23.65■■□□□ 1.38
HLA-F-222ENST00000462777 CCSAPQ6IQ19 270 aaPredicted RBP23.65■■□□□ 1.38
HLA-F-222ENST00000462777 ZBTB47Q9UFB7 747 aaPredicted RBP23.65■■□□□ 1.38
HLA-F-222ENST00000462777 PLIN4Q96Q06 1357 aa23.65■■□□□ 1.38
HLA-F-222ENST00000462777 HSFX4A0A1B0GTS1 333 aaPredicted RBP23.64■■□□□ 1.37
HLA-F-222ENST00000462777 HSFX3A0A1B0GWH4 333 aaPredicted RBP23.64■■□□□ 1.37
HLA-F-222ENST00000462777 ASGR1P07306 291 aa23.64■■□□□ 1.37
HLA-F-222ENST00000462777 EPHB4P54760 987 aa23.64■■□□□ 1.37
HLA-F-222ENST00000462777 GJA9P57773 515 aa23.64■■□□□ 1.37
HLA-F-222ENST00000462777 TKFCQ3LXA3 575 aa23.64■■□□□ 1.37
HLA-F-222ENST00000462777 NOL8Q76FK4 1167 aaKnown RBP23.64■■□□□ 1.37
HLA-F-222ENST00000462777 CCDC144CPQ8IYA2 1237 aa23.64■■□□□ 1.37
HLA-F-222ENST00000462777 STAG1Q8WVM7 1258 aa23.64■■□□□ 1.37
HLA-F-222ENST00000462777 GMCL1Q96IK5 515 aa23.64■■□□□ 1.37
HLA-F-222ENST00000462777 SEC62Q99442 399 aaKnown RBP23.64■■□□□ 1.37
HLA-F-222ENST00000462777 COL25A1Q9BXS0 654 aaPredicted RBP23.64■■□□□ 1.37
HLA-F-222ENST00000462777 A0A0U1RQG5 324 aaPredicted RBP23.63■■□□□ 1.37
HLA-F-222ENST00000462777 ASB14A6NK59 587 aa23.63■■□□□ 1.37
HLA-F-222ENST00000462777 ZMYM1Q5SVZ6 1142 aa23.63■■□□□ 1.37
HLA-F-222ENST00000462777 MYLIPQ8WY64 445 aa23.63■■□□□ 1.37
HLA-F-222ENST00000462777 UPF3AQ9H1J1 476 aaKnown RBP23.63■■□□□ 1.37
HLA-F-222ENST00000462777 TTYH1Q9H313 450 aaPredicted RBP23.63■■□□□ 1.37
HLA-F-222ENST00000462777 GREB1LQ9C091 1923 aaPredicted RBP23.63■■□□□ 1.37
HLA-F-222ENST00000462777 MYADML2A6NDP7 307 aa23.62■■□□□ 1.37
HLA-F-222ENST00000462777 TSPY2A6NKD2 308 aa23.62■■□□□ 1.37
HLA-F-222ENST00000462777 ARVCFO00192 962 aa23.62■■□□□ 1.37
HLA-F-222ENST00000462777 TLR3O15455 904 aaKnown RBP23.62■■□□□ 1.37
HLA-F-222ENST00000462777 FOSL2P15408 326 aa23.62■■□□□ 1.37
HLA-F-222ENST00000462777 MCCP23508 829 aa23.62■■□□□ 1.37
HLA-F-222ENST00000462777 PPIGQ13427 754 aaKnown RBP eCLIP23.62■■□□□ 1.37
HLA-F-222ENST00000462777 MFSD5Q6N075 450 aa23.62■■□□□ 1.37
HLA-F-222ENST00000462777 RNF146Q9NTX7 359 aa23.62■■□□□ 1.37
HLA-F-222ENST00000462777 STX8Q9UNK0 236 aa23.62■■□□□ 1.37
HLA-F-222ENST00000462777 CUL9Q8IWT3 2517 aa23.61■■□□□ 1.37
HLA-F-222ENST00000462777 LAMA2P24043 3122 aaKnown RBP23.61■■□□□ 1.37
HLA-F-222ENST00000462777 PLA2G6O60733 806 aa23.61■■□□□ 1.37
HLA-F-222ENST00000462777 CDK7P50613 346 aa23.61■■□□□ 1.37
HLA-F-222ENST00000462777 TNFAIP2Q03169 654 aa23.61■■□□□ 1.37
HLA-F-222ENST00000462777 TMEM199Q8N511 208 aa23.61■■□□□ 1.37
HLA-F-222ENST00000462777 PI4K2BQ8TCG2 481 aa23.61■■□□□ 1.37
HLA-F-222ENST00000462777 FGD4Q96M96 766 aa23.61■■□□□ 1.37
HLA-F-222ENST00000462777 TRERF1Q96PN7 1200 aa23.61■■□□□ 1.37
HLA-F-222ENST00000462777 TBX21Q9UL17 535 aa23.61■■□□□ 1.37
HLA-F-222ENST00000462777 PLXNA1Q9UIW2 1896 aa23.6■■□□□ 1.37
HLA-F-222ENST00000462777 MX1P20591 662 aa23.6■■□□□ 1.37
HLA-F-222ENST00000462777 CNTN2Q02246 1040 aa23.6■■□□□ 1.37
HLA-F-222ENST00000462777 RCSD1Q6JBY9 416 aa23.6■■□□□ 1.37
HLA-F-222ENST00000462777 FAM133AQ8N9E0 248 aa23.6■■□□□ 1.37
HLA-F-222ENST00000462777 AGBL1Q96MI9 1066 aa23.6■■□□□ 1.37
HLA-F-222ENST00000462777 A1CFQ9NQ94 594 aaKnown RBP23.6■■□□□ 1.37
HLA-F-222ENST00000462777 ADCY6O43306 1168 aa23.59■■□□□ 1.37
HLA-F-222ENST00000462777 ZEB2O60315 1214 aa23.59■■□□□ 1.37
HLA-F-222ENST00000462777 ALAS1P13196 640 aa23.59■■□□□ 1.37
HLA-F-222ENST00000462777 CCDC129Q6ZRS4 1044 aa23.59■■□□□ 1.37
HLA-F-222ENST00000462777 CHMP4CQ96CF2 233 aa23.59■■□□□ 1.37
HLA-F-222ENST00000462777 AP5M1Q9H0R1 490 aa23.59■■□□□ 1.37
HLA-F-222ENST00000462777 CABYRO75952 493 aa23.58■■□□□ 1.37
HLA-F-222ENST00000462777 DNAJB2P25686 324 aa23.58■■□□□ 1.37
HLA-F-222ENST00000462777 IRX5P78411 483 aaPredicted RBP23.58■■□□□ 1.37
HLA-F-222ENST00000462777 KCTD1Q719H9 257 aa23.58■■□□□ 1.37
HLA-F-222ENST00000462777 RANBP6O60518 1105 aaKnown RBP23.57■■□□□ 1.36
HLA-F-222ENST00000462777 NKX3-2P78367 333 aa23.57■■□□□ 1.36
HLA-F-222ENST00000462777 OTUD7AQ8TE49 926 aaPredicted RBP23.57■■□□□ 1.36
HLA-F-222ENST00000462777 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.57■■□□□ 1.36
HLA-F-222ENST00000462777 KATNBL1Q9H079 304 aa23.57■■□□□ 1.36
HLA-F-222ENST00000462777 PCDHB15Q9Y5E8 787 aa23.57■■□□□ 1.36
HLA-F-222ENST00000462777 ZNF536O15090 1300 aa23.57■■□□□ 1.36
HLA-F-222ENST00000462777 CTDSPL2Q05D32 466 aa23.56■■□□□ 1.36
HLA-F-222ENST00000462777 PSRC1Q6PGN9 363 aaPredicted RBP23.56■■□□□ 1.36
HLA-F-222ENST00000462777 FAM126BQ8IXS8 530 aa23.56■■□□□ 1.36
HLA-F-222ENST00000462777 TIFAQ96CG3 184 aa23.56■■□□□ 1.36
HLA-F-222ENST00000462777 SEZ6LQ9BYH1 1024 aa23.56■■□□□ 1.36
HLA-F-222ENST00000462777 PPP1R12CQ9BZL4 782 aa23.56■■□□□ 1.36
HLA-F-222ENST00000462777 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.56■■□□□ 1.36
HLA-F-222ENST00000462777 SOWAHBA6NEL2 793 aa23.55■■□□□ 1.36
HLA-F-222ENST00000462777 BEX3Q00994 111 aa23.55■■□□□ 1.36
HLA-F-222ENST00000462777 FSCN1Q16658 493 aaKnown RBP23.55■■□□□ 1.36
HLA-F-222ENST00000462777 CCDC96Q2M329 555 aa23.55■■□□□ 1.36
HLA-F-222ENST00000462777 IQSEC1Q6DN90 963 aa23.55■■□□□ 1.36
HLA-F-222ENST00000462777 TLK2Q86UE8 772 aa23.55■■□□□ 1.36
HLA-F-222ENST00000462777 EVI5LQ96CN4 794 aa23.55■■□□□ 1.36
HLA-F-222ENST00000462777 ZNF576Q9H609 170 aa23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms