RNA–Protein interactions for RNA: ENST00000462165.2

CBX3-205, Transcript of chromobox 3, humanhuman

TSL 3

Gene CBX3, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-205ENST00000462165 CSF2RAP15509 400 aa13.01□□□□□ -0.33
CBX3-205ENST00000462165 COL9A1P20849 921 aa13.01□□□□□ -0.33
CBX3-205ENST00000462165 NKX3-2P78367 333 aa13.01□□□□□ -0.33
CBX3-205ENST00000462165 KLRC3Q07444 240 aa13.01□□□□□ -0.33
CBX3-205ENST00000462165 CCDC144BQ3MJ40 725 aa13.01□□□□□ -0.33
CBX3-205ENST00000462165 SBK1Q52WX2 424 aa13.01□□□□□ -0.33
CBX3-205ENST00000462165 PSRC1Q6PGN9 363 aaPredicted RBP13.01□□□□□ -0.33
CBX3-205ENST00000462165 CCDC129Q6ZRS4 1044 aa13.01□□□□□ -0.33
CBX3-205ENST00000462165 SIRT2Q8IXJ6 389 aa13.01□□□□□ -0.33
CBX3-205ENST00000462165 FAM126BQ8IXS8 530 aa13.01□□□□□ -0.33
CBX3-205ENST00000462165 FGD4Q96M96 766 aa13.01□□□□□ -0.33
CBX3-205ENST00000462165 PUS7LQ9H0K6 701 aaKnown RBP13.01□□□□□ -0.33
CBX3-205ENST00000462165 ZBED4O75132 1171 aa13□□□□□ -0.33
CBX3-205ENST00000462165 NDUFB10O96000 172 aa13□□□□□ -0.33
CBX3-205ENST00000462165 RASA1P20936 1047 aa13□□□□□ -0.33
CBX3-205ENST00000462165 GNASQ5JWF2 1037 aa13□□□□□ -0.33
CBX3-205ENST00000462165 ZSCAN25Q6NSZ9 544 aa13□□□□□ -0.33
CBX3-205ENST00000462165 ZNF365Q70YC5 407 aa13□□□□□ -0.33
CBX3-205ENST00000462165 ARMCX2Q7L311 632 aa13□□□□□ -0.33
CBX3-205ENST00000462165 CPXCR1Q8N123 301 aa13□□□□□ -0.33
CBX3-205ENST00000462165 ANKRD35Q8N283 1001 aa13□□□□□ -0.33
CBX3-205ENST00000462165 VTI1AQ96AJ9 217 aa13□□□□□ -0.33
CBX3-205ENST00000462165 PRDM12Q9H4Q4 367 aa13□□□□□ -0.33
CBX3-205ENST00000462165 SLC38A10Q9HBR0 1119 aa13□□□□□ -0.33
CBX3-205ENST00000462165 THEGQ9P2T0 379 aa13□□□□□ -0.33
CBX3-205ENST00000462165 CTAGE5O15320 804 aa12.99□□□□□ -0.33
CBX3-205ENST00000462165 TLR3O15455 904 aaKnown RBP12.99□□□□□ -0.33
CBX3-205ENST00000462165 CD4P01730 458 aa12.99□□□□□ -0.33
CBX3-205ENST00000462165 ACRP10323 421 aa12.99□□□□□ -0.33
CBX3-205ENST00000462165 CHST13Q8NET6 341 aa12.99□□□□□ -0.33
CBX3-205ENST00000462165 PPM1EQ8WY54 764 aa12.99□□□□□ -0.33
CBX3-205ENST00000462165 HERVK_113Q902F9 699 aa12.99□□□□□ -0.33
CBX3-205ENST00000462165 ASB2Q96Q27 587 aa12.99□□□□□ -0.33
CBX3-205ENST00000462165 PPP1R12CQ9BZL4 782 aa12.99□□□□□ -0.33
CBX3-205ENST00000462165 KATNBL1Q9H079 304 aa12.99□□□□□ -0.33
CBX3-205ENST00000462165 BCL11AQ9H165 835 aa12.99□□□□□ -0.33
CBX3-205ENST00000462165 MKNK2Q9HBH9 465 aa12.99□□□□□ -0.33
CBX3-205ENST00000462165 RAVER2Q9HCJ3 691 aaKnown RBP12.99□□□□□ -0.33
CBX3-205ENST00000462165 IL23AQ9NPF7 189 aa12.99□□□□□ -0.33
CBX3-205ENST00000462165 FBXO40Q9UH90 709 aa12.99□□□□□ -0.33
CBX3-205ENST00000462165 LRRC37A2A6NM11 1700 aa12.99□□□□□ -0.33
CBX3-205ENST00000462165 IGKV6D-41A0A0C4DH26 115 aa12.98□□□□□ -0.33
CBX3-205ENST00000462165 MS4A1P11836 297 aa12.98□□□□□ -0.33
CBX3-205ENST00000462165 SLC4A3P48751 1232 aa12.98□□□□□ -0.33
CBX3-205ENST00000462165 OAZ1P54368 228 aa12.98□□□□□ -0.33
CBX3-205ENST00000462165 ADGRE1Q14246 886 aa12.98□□□□□ -0.33
CBX3-205ENST00000462165 RAB30Q15771 203 aa12.98□□□□□ -0.33
CBX3-205ENST00000462165 GIMAP6Q6P9H5 292 aa12.98□□□□□ -0.33
CBX3-205ENST00000462165 CCDC144CPQ8IYA2 1237 aa12.98□□□□□ -0.33
CBX3-205ENST00000462165 SLC43A3Q8NBI5 491 aa12.98□□□□□ -0.33
CBX3-205ENST00000462165 MKL1Q969V6 931 aa12.98□□□□□ -0.33
CBX3-205ENST00000462165 KIFC2Q96AC6 838 aa12.98□□□□□ -0.33
CBX3-205ENST00000462165 STRBPQ96SI9 672 aaKnown RBP12.98□□□□□ -0.33
CBX3-205ENST00000462165 ZBTB40Q9NUA8 1239 aa12.98□□□□□ -0.33
CBX3-205ENST00000462165 CLIP2Q9UDT6 1046 aa12.98□□□□□ -0.33
CBX3-205ENST00000462165 MSRAQ9UJ68 235 aa12.98□□□□□ -0.33
CBX3-205ENST00000462165 FEM1BQ9UK73 627 aa12.98□□□□□ -0.33
CBX3-205ENST00000462165 CTDP1Q9Y5B0 961 aaPredicted RBP12.98□□□□□ -0.33
CBX3-205ENST00000462165 NCOR1O75376 2440 aa12.97□□□□□ -0.33
CBX3-205ENST00000462165 GSG1L2A8MUP6 293 aa12.97□□□□□ -0.33
CBX3-205ENST00000462165 FDX1P10109 184 aa12.97□□□□□ -0.33
CBX3-205ENST00000462165 CYP2C18P33260 490 aa12.97□□□□□ -0.33
CBX3-205ENST00000462165 MRPS5P82675 430 aaKnown RBP12.97□□□□□ -0.33
CBX3-205ENST00000462165 MTIF3Q9H2K0 278 aaKnown RBP12.97□□□□□ -0.33
CBX3-205ENST00000462165 CXXC1Q9P0U4 656 aaPredicted RBP12.97□□□□□ -0.33
CBX3-205ENST00000462165 SYNPO2Q9UMS6 1093 aa12.97□□□□□ -0.33
CBX3-205ENST00000462165 ASTN1O14525 1302 aa12.96□□□□□ -0.33
CBX3-205ENST00000462165 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.96□□□□□ -0.33
CBX3-205ENST00000462165 MINDY4BA8MYZ0 360 aa12.96□□□□□ -0.33
CBX3-205ENST00000462165 CABYRO75952 493 aa12.96□□□□□ -0.33
CBX3-205ENST00000462165 FGBP02675 491 aa12.96□□□□□ -0.33
CBX3-205ENST00000462165 HNRNPUQ00839 825 aaKnown RBP eCLIP12.96□□□□□ -0.33
CBX3-205ENST00000462165 BEX3Q00994 111 aa12.96□□□□□ -0.33
CBX3-205ENST00000462165 TNFAIP2Q03169 654 aa12.96□□□□□ -0.33
CBX3-205ENST00000462165 STK11IPQ8N1F8 1099 aa12.96□□□□□ -0.33
CBX3-205ENST00000462165 FAM133AQ8N9E0 248 aa12.96□□□□□ -0.33
CBX3-205ENST00000462165 GMCL1P1Q8NEA9 526 aa12.96□□□□□ -0.33
CBX3-205ENST00000462165 ADAMTS19Q8TE59 1207 aa12.96□□□□□ -0.33
CBX3-205ENST00000462165 SEZ6LQ9BYH1 1024 aa12.96□□□□□ -0.33
CBX3-205ENST00000462165 NKX2-4Q9H2Z4 354 aa12.96□□□□□ -0.33
CBX3-205ENST00000462165 SLC28A3Q9HAS3 691 aa12.96□□□□□ -0.33
CBX3-205ENST00000462165 MTMR4Q9NYA4 1195 aa12.96□□□□□ -0.33
CBX3-205ENST00000462165 DDX19BQ9UMR2 479 aa12.96□□□□□ -0.33
CBX3-205ENST00000462165 GNEQ9Y223 722 aaKnown RBP12.96□□□□□ -0.33
CBX3-205ENST00000462165 BDP1A6H8Y1 2624 aa12.96□□□□□ -0.33
CBX3-205ENST00000462165 TCF20Q9UGU0 1960 aaKnown RBP12.96□□□□□ -0.34
CBX3-205ENST00000462165 UMODL1Q5DID0 1318 aa12.95□□□□□ -0.34
CBX3-205ENST00000462165 IGFBP4P22692 258 aa12.95□□□□□ -0.34
CBX3-205ENST00000462165 CNTN2Q02246 1040 aa12.95□□□□□ -0.34
CBX3-205ENST00000462165 CCDC85BQ15834 202 aaPredicted RBP12.95□□□□□ -0.34
CBX3-205ENST00000462165 ZNF444Q8N0Y2 327 aaPredicted RBP12.95□□□□□ -0.34
CBX3-205ENST00000462165 CEP95Q96GE4 821 aa12.95□□□□□ -0.34
CBX3-205ENST00000462165 UHRF1Q96T88 793 aaPredicted RBP12.95□□□□□ -0.34
CBX3-205ENST00000462165 HIPK3Q9H422 1215 aa12.95□□□□□ -0.34
CBX3-205ENST00000462165 ACAD9Q9H845 621 aa12.95□□□□□ -0.34
CBX3-205ENST00000462165 ZNF287Q9HBT7 754 aa12.95□□□□□ -0.34
CBX3-205ENST00000462165 YBX2Q9Y2T7 364 aaKnown RBP12.95□□□□□ -0.34
CBX3-205ENST00000462165 LCTP09848 1927 aa12.95□□□□□ -0.34
CBX3-205ENST00000462165 PLIN4Q96Q06 1357 aa12.94□□□□□ -0.34
CBX3-205ENST00000462165 GRIN2DO15399 1336 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms