RNA–Protein interactions for RNA: ENST00000461897.5

COL4A6-204, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,889 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-204ENST00000461897 INTS13Q9NVM9 706 aa14.13□□□□□ -0.15
COL4A6-204ENST00000461897 PI4KBQ9UBF8 816 aa14.13□□□□□ -0.15
COL4A6-204ENST00000461897 FBXO2Q9UK22 296 aaPredicted RBP14.13□□□□□ -0.15
COL4A6-204ENST00000461897 MTMR7Q9Y216 660 aa14.13□□□□□ -0.15
COL4A6-204ENST00000461897 SRCAPQ6ZRS2 3230 aa14.13□□□□□ -0.15
COL4A6-204ENST00000461897 MYH4Q9Y623 1939 aa14.12□□□□□ -0.15
COL4A6-204ENST00000461897 CYTH3O43739 400 aa14.12□□□□□ -0.15
COL4A6-204ENST00000461897 SERPINC1P01008 464 aa14.12□□□□□ -0.15
COL4A6-204ENST00000461897 VEGFAP15692 232 aaPredicted RBP14.12□□□□□ -0.15
COL4A6-204ENST00000461897 SAFBQ15424 915 aaKnown RBP eCLIP14.12□□□□□ -0.15
COL4A6-204ENST00000461897 NPY5RQ15761 445 aa14.12□□□□□ -0.15
COL4A6-204ENST00000461897 PFKFB3Q16875 520 aaPredicted RBP14.12□□□□□ -0.15
COL4A6-204ENST00000461897 CREBRFQ8IUR6 639 aa14.12□□□□□ -0.15
COL4A6-204ENST00000461897 MLKLQ8NB16 471 aa14.12□□□□□ -0.15
COL4A6-204ENST00000461897 AGBL3Q8NEM8 1001 aa14.12□□□□□ -0.15
COL4A6-204ENST00000461897 NLGN2Q8NFZ4 835 aa14.12□□□□□ -0.15
COL4A6-204ENST00000461897 ENOX1Q8TC92 643 aaKnown RBP14.12□□□□□ -0.15
COL4A6-204ENST00000461897 HDAC9Q9UKV0 1011 aa14.12□□□□□ -0.15
COL4A6-204ENST00000461897 GOLGA6L9A6NEM1 432 aa14.12□□□□□ -0.15
COL4A6-204ENST00000461897 ZSCAN12O43309 604 aa14.12□□□□□ -0.15
COL4A6-204ENST00000461897 GOLGA8HP0CJ92 632 aa14.12□□□□□ -0.15
COL4A6-204ENST00000461897 SCG2P13521 617 aa14.12□□□□□ -0.15
COL4A6-204ENST00000461897 MORC3Q14149 939 aa14.12□□□□□ -0.15
COL4A6-204ENST00000461897 ZSCAN29Q8IWY8 852 aaPredicted RBP14.12□□□□□ -0.15
COL4A6-204ENST00000461897 OGFOD1Q8N543 542 aa14.12□□□□□ -0.15
COL4A6-204ENST00000461897 SPATA20Q8TB22 786 aa14.12□□□□□ -0.15
COL4A6-204ENST00000461897 FANCLQ9NW38 375 aa14.12□□□□□ -0.15
COL4A6-204ENST00000461897 DACH1Q9UI36 760 aa14.12□□□□□ -0.15
COL4A6-204ENST00000461897 CLRN2A0PK11 232 aa14.11□□□□□ -0.15
COL4A6-204ENST00000461897 SLFN14P0C7P3 912 aa14.11□□□□□ -0.15
COL4A6-204ENST00000461897 XBP1P17861 261 aa14.11□□□□□ -0.15
COL4A6-204ENST00000461897 GNAQP50148 359 aa14.11□□□□□ -0.15
COL4A6-204ENST00000461897 EIF6P56537 245 aaKnown RBP14.11□□□□□ -0.15
COL4A6-204ENST00000461897 RASSF7Q02833 373 aa14.11□□□□□ -0.15
COL4A6-204ENST00000461897 POSTNQ15063 836 aa14.11□□□□□ -0.15
COL4A6-204ENST00000461897 DLGAP5Q15398 846 aa14.11□□□□□ -0.15
COL4A6-204ENST00000461897 SHROOM1Q2M3G4 852 aaPredicted RBP14.11□□□□□ -0.15
COL4A6-204ENST00000461897 KANK3Q6NY19 840 aa14.11□□□□□ -0.15
COL4A6-204ENST00000461897 LRRC47Q8N1G4 583 aaKnown RBP14.11□□□□□ -0.15
COL4A6-204ENST00000461897 MAN1B1Q9UKM7 699 aa14.11□□□□□ -0.15
COL4A6-204ENST00000461897 LTBP3Q9NS15 1303 aa14.11□□□□□ -0.15
COL4A6-204ENST00000461897 TTLL1O95922 423 aa14.1□□□□□ -0.15
COL4A6-204ENST00000461897 PDHBP11177 359 aa14.1□□□□□ -0.15
COL4A6-204ENST00000461897 PRELPP51888 382 aa14.1□□□□□ -0.15
COL4A6-204ENST00000461897 CIAPIN1Q6FI81 312 aa14.1□□□□□ -0.15
COL4A6-204ENST00000461897 ISM2Q6H9L7 571 aa14.1□□□□□ -0.15
COL4A6-204ENST00000461897 TATDN1Q6P1N9 297 aa14.1□□□□□ -0.15
COL4A6-204ENST00000461897 USP17L2Q6R6M4 530 aa14.1□□□□□ -0.15
COL4A6-204ENST00000461897 MTMR14Q8NCE2 650 aa14.1□□□□□ -0.15
COL4A6-204ENST00000461897 JDP2Q8WYK2 163 aa14.1□□□□□ -0.15
COL4A6-204ENST00000461897 CCDC17Q96LX7 622 aa14.1□□□□□ -0.15
COL4A6-204ENST00000461897 CPVLQ9H3G5 476 aa14.1□□□□□ -0.15
COL4A6-204ENST00000461897 ZNF446Q9NWS9 450 aa14.1□□□□□ -0.15
COL4A6-204ENST00000461897 ZNF70Q9UC06 446 aaPredicted RBP14.1□□□□□ -0.15
COL4A6-204ENST00000461897 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.1□□□□□ -0.15
COL4A6-204ENST00000461897 DNAI1Q9UI46 699 aa14.1□□□□□ -0.15
COL4A6-204ENST00000461897 SRPRBQ9Y5M8 271 aaKnown RBP14.1□□□□□ -0.15
COL4A6-204ENST00000461897 V9GYY5 206 aaPredicted RBP14.1□□□□□ -0.15
COL4A6-204ENST00000461897 CNTNAP1P78357 1384 aa14.1□□□□□ -0.15
COL4A6-204ENST00000461897 USP17L5A8MUK1 530 aa14.1□□□□□ -0.15
COL4A6-204ENST00000461897 TCP10L2B9ZVM9 353 aa14.1□□□□□ -0.15
COL4A6-204ENST00000461897 KLRF2D3W0D1 207 aa14.1□□□□□ -0.15
COL4A6-204ENST00000461897 MPHOSPH10O00566 681 aaKnown RBP14.1□□□□□ -0.15
COL4A6-204ENST00000461897 STX10O60499 249 aa14.1□□□□□ -0.15
COL4A6-204ENST00000461897 PARP1P09874 1014 aaKnown RBP14.1□□□□□ -0.15
COL4A6-204ENST00000461897 ERCC6LQ2NKX8 1250 aa14.1□□□□□ -0.15
COL4A6-204ENST00000461897 SPDYE2Q495Y8 402 aa14.1□□□□□ -0.15
COL4A6-204ENST00000461897 ZBED3Q96IU2 234 aaPredicted RBP14.1□□□□□ -0.15
COL4A6-204ENST00000461897 SPZ1Q9BXG8 430 aa14.1□□□□□ -0.15
COL4A6-204ENST00000461897 CEP131Q9UPN4 1083 aa14.1□□□□□ -0.15
COL4A6-204ENST00000461897 SHTN1A0MZ66 631 aa14.09□□□□□ -0.15
COL4A6-204ENST00000461897 VWA3AA6NCI4 1184 aa14.09□□□□□ -0.15
COL4A6-204ENST00000461897 FAM205CA6NFA0 338 aa14.09□□□□□ -0.15
COL4A6-204ENST00000461897 TMEM232C9JQI7 657 aa14.09□□□□□ -0.15
COL4A6-204ENST00000461897 TADA3O75528 432 aa14.09□□□□□ -0.15
COL4A6-204ENST00000461897 TPM1P09493 284 aa14.09□□□□□ -0.15
COL4A6-204ENST00000461897 SNHG28P0DPA3 235 aa14.09□□□□□ -0.15
COL4A6-204ENST00000461897 ERCC5P28715 1186 aaPredicted RBP14.09□□□□□ -0.15
COL4A6-204ENST00000461897 KRT2P35908 639 aa14.09□□□□□ -0.15
COL4A6-204ENST00000461897 BMS1Q14692 1282 aaKnown RBP14.09□□□□□ -0.15
COL4A6-204ENST00000461897 TERF2Q15554 542 aa14.09□□□□□ -0.15
COL4A6-204ENST00000461897 HOMER1Q86YM7 354 aa14.09□□□□□ -0.15
COL4A6-204ENST00000461897 GPKOWQ92917 476 aaPredicted RBP eCLIP14.09□□□□□ -0.15
COL4A6-204ENST00000461897 TNFRSF25Q93038 417 aa14.09□□□□□ -0.15
COL4A6-204ENST00000461897 CSRNP1Q96S65 589 aa14.09□□□□□ -0.15
COL4A6-204ENST00000461897 LZTS2Q9BRK4 669 aa14.09□□□□□ -0.15
COL4A6-204ENST00000461897 TMOD2Q9NZR1 351 aa14.09□□□□□ -0.15
COL4A6-204ENST00000461897 ZHX1Q9UKY1 873 aaPredicted RBP14.09□□□□□ -0.15
COL4A6-204ENST00000461897 FANCGO15287 622 aa14.08□□□□□ -0.16
COL4A6-204ENST00000461897 ACTN4O43707 911 aaKnown RBP14.08□□□□□ -0.16
COL4A6-204ENST00000461897 CERKLQ49MI3 558 aaPredicted RBP14.08□□□□□ -0.16
COL4A6-204ENST00000461897 EARS2Q5JPH6 523 aaKnown RBP14.08□□□□□ -0.16
COL4A6-204ENST00000461897 SPECC1LQ69YQ0 1117 aa14.08□□□□□ -0.16
COL4A6-204ENST00000461897 TYW1BQ6NUM6 668 aa14.08□□□□□ -0.16
COL4A6-204ENST00000461897 LRRN4CLQ8ND94 238 aa14.08□□□□□ -0.16
COL4A6-204ENST00000461897 PPP2R2CQ9Y2T4 447 aa14.08□□□□□ -0.16
COL4A6-204ENST00000461897 EFCAB8A8MWE9 144 aa14.08□□□□□ -0.16
COL4A6-204ENST00000461897 ADAMTS3O15072 1205 aa14.08□□□□□ -0.16
COL4A6-204ENST00000461897 ZRANB2O95218 330 aaKnown RBP eCLIP14.08□□□□□ -0.16
COL4A6-204ENST00000461897 CLCN6P51797 869 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms