RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 ZNF467Q7Z7K2 595 aaPredicted RBP10.85□□□□□ -0.67
BRCA1-207ENST00000461798 FAM160B2Q86V87 743 aa10.85□□□□□ -0.67
BRCA1-207ENST00000461798 CHST13Q8NET6 341 aa10.85□□□□□ -0.67
BRCA1-207ENST00000461798 CHURC1Q8WUH1 139 aa10.85□□□□□ -0.67
BRCA1-207ENST00000461798 KIFC2Q96AC6 838 aa10.85□□□□□ -0.67
BRCA1-207ENST00000461798 SENP6Q9GZR1 1112 aaPredicted RBP10.85□□□□□ -0.67
BRCA1-207ENST00000461798 TCP11L1Q9NUJ3 509 aa10.85□□□□□ -0.67
BRCA1-207ENST00000461798 FBXO40Q9UH90 709 aa10.85□□□□□ -0.67
BRCA1-207ENST00000461798 PARP14Q460N5 1801 aa10.84□□□□□ -0.67
BRCA1-207ENST00000461798 TSPY2A6NKD2 308 aa10.84□□□□□ -0.67
BRCA1-207ENST00000461798 TMEM232C9JQI7 657 aa10.84□□□□□ -0.67
BRCA1-207ENST00000461798 ZNF865P0CJ78 1059 aaPredicted RBP10.84□□□□□ -0.67
BRCA1-207ENST00000461798 PCP11498 1178 aaKnown RBP10.84□□□□□ -0.67
BRCA1-207ENST00000461798 SDSP20132 328 aa10.84□□□□□ -0.67
BRCA1-207ENST00000461798 ZNF589Q86UQ0 364 aaPredicted RBP10.84□□□□□ -0.67
BRCA1-207ENST00000461798 CPXCR1Q8N123 301 aa10.84□□□□□ -0.67
BRCA1-207ENST00000461798 DDX11Q96FC9 970 aa10.84□□□□□ -0.67
BRCA1-207ENST00000461798 RAVER2Q9HCJ3 691 aaKnown RBP10.84□□□□□ -0.67
BRCA1-207ENST00000461798 ZMYND8Q9ULU4 1186 aaPredicted RBP10.84□□□□□ -0.67
BRCA1-207ENST00000461798 STX8Q9UNK0 236 aa10.84□□□□□ -0.67
BRCA1-207ENST00000461798 CTDP1Q9Y5B0 961 aaPredicted RBP10.84□□□□□ -0.67
BRCA1-207ENST00000461798 ZNF536O15090 1300 aa10.84□□□□□ -0.67
BRCA1-207ENST00000461798 CCDC171Q6TFL3 1326 aa10.84□□□□□ -0.67
BRCA1-207ENST00000461798 SYNGAP1Q96PV0 1343 aa10.84□□□□□ -0.67
BRCA1-207ENST00000461798 TRIM6-TRIM34B2RNG4 842 aa10.83□□□□□ -0.68
BRCA1-207ENST00000461798 RANBP6O60518 1105 aaKnown RBP10.83□□□□□ -0.68
BRCA1-207ENST00000461798 NMT2O60551 498 aa10.83□□□□□ -0.68
BRCA1-207ENST00000461798 SNAI1O95863 264 aaPredicted RBP10.83□□□□□ -0.68
BRCA1-207ENST00000461798 MCCP23508 829 aa10.83□□□□□ -0.68
BRCA1-207ENST00000461798 SLC1A4P43007 532 aa10.83□□□□□ -0.68
BRCA1-207ENST00000461798 NT5C2P49902 561 aa10.83□□□□□ -0.68
BRCA1-207ENST00000461798 STAT2P52630 851 aa10.83□□□□□ -0.68
BRCA1-207ENST00000461798 MFAP1P55081 439 aaKnown RBP10.83□□□□□ -0.68
BRCA1-207ENST00000461798 SNX17Q15036 470 aa10.83□□□□□ -0.68
BRCA1-207ENST00000461798 LRRC41Q15345 812 aa10.83□□□□□ -0.68
BRCA1-207ENST00000461798 TKFCQ3LXA3 575 aa10.83□□□□□ -0.68
BRCA1-207ENST00000461798 GJC2Q5T442 439 aaPredicted RBP10.83□□□□□ -0.68
BRCA1-207ENST00000461798 C1orf53Q5VUE5 145 aa10.83□□□□□ -0.68
BRCA1-207ENST00000461798 BTNL9Q6UXG8 535 aa10.83□□□□□ -0.68
BRCA1-207ENST00000461798 RILPL2Q969X0 211 aa10.83□□□□□ -0.68
BRCA1-207ENST00000461798 TTC14Q96N46 770 aa10.83□□□□□ -0.68
BRCA1-207ENST00000461798 POTEB3A0JP26 581 aa10.82□□□□□ -0.68
BRCA1-207ENST00000461798 KBTBD13C9JR72 458 aa10.82□□□□□ -0.68
BRCA1-207ENST00000461798 RARBP10826 455 aa10.82□□□□□ -0.68
BRCA1-207ENST00000461798 TOP1P11387 765 aaKnown RBP10.82□□□□□ -0.68
BRCA1-207ENST00000461798 AKR1A1P14550 325 aa10.82□□□□□ -0.68
BRCA1-207ENST00000461798 TAL1P17542 331 aaPredicted RBP10.82□□□□□ -0.68
BRCA1-207ENST00000461798 SYN1P17600 705 aa10.82□□□□□ -0.68
BRCA1-207ENST00000461798 MAGEA10P43363 369 aaPredicted RBP10.82□□□□□ -0.68
BRCA1-207ENST00000461798 ANO1Q5XXA6 986 aa10.82□□□□□ -0.68
BRCA1-207ENST00000461798 POTEBQ6S5H4 581 aa10.82□□□□□ -0.68
BRCA1-207ENST00000461798 SLC39A5Q6ZMH5 540 aa10.82□□□□□ -0.68
BRCA1-207ENST00000461798 ANKRD35Q8N283 1001 aa10.82□□□□□ -0.68
BRCA1-207ENST00000461798 DCAF4Q8WV16 495 aa10.82□□□□□ -0.68
BRCA1-207ENST00000461798 FGD4Q96M96 766 aa10.82□□□□□ -0.68
BRCA1-207ENST00000461798 PHF24Q9UPV7 400 aa10.82□□□□□ -0.68
BRCA1-207ENST00000461798 CNPY2Q9Y2B0 182 aa10.82□□□□□ -0.68
BRCA1-207ENST00000461798 SUPT16HQ9Y5B9 1047 aaKnown RBP10.82□□□□□ -0.68
BRCA1-207ENST00000461798 ALPK3Q96L96 1907 aa10.82□□□□□ -0.68
BRCA1-207ENST00000461798 RANBP2P49792 3224 aaKnown RBP10.81□□□□□ -0.68
BRCA1-207ENST00000461798 HIP1O00291 1037 aa10.81□□□□□ -0.68
BRCA1-207ENST00000461798 ADCYAP1R1P41586 468 aa10.81□□□□□ -0.68
BRCA1-207ENST00000461798 RTP1P59025 263 aa10.81□□□□□ -0.68
BRCA1-207ENST00000461798 LRIT3Q3SXY7 679 aa10.81□□□□□ -0.68
BRCA1-207ENST00000461798 AKNAD1Q5T1N1 836 aa10.81□□□□□ -0.68
BRCA1-207ENST00000461798 KCTD1Q719H9 257 aa10.81□□□□□ -0.68
BRCA1-207ENST00000461798 RNF180Q86T96 592 aa10.81□□□□□ -0.68
BRCA1-207ENST00000461798 FAM133AQ8N9E0 248 aa10.81□□□□□ -0.68
BRCA1-207ENST00000461798 TMEM47Q9BQJ4 181 aa10.81□□□□□ -0.68
BRCA1-207ENST00000461798 TSEN34Q9BSV6 310 aaKnown RBP10.81□□□□□ -0.68
BRCA1-207ENST00000461798 RNF41Q9H4P4 317 aaPredicted RBP10.81□□□□□ -0.68
BRCA1-207ENST00000461798 ACAD9Q9H845 621 aa10.81□□□□□ -0.68
BRCA1-207ENST00000461798 XPNPEP3Q9NQH7 507 aa10.81□□□□□ -0.68
BRCA1-207ENST00000461798 FAM184BQ9ULE4 1060 aa10.81□□□□□ -0.68
BRCA1-207ENST00000461798 PRR12Q9ULL5 1215 aa10.81□□□□□ -0.68
BRCA1-207ENST00000461798 ZNFX1Q9P2E3 1918 aaKnown RBP10.8□□□□□ -0.68
BRCA1-207ENST00000461798 COL11A1P12107 1806 aaPredicted RBP10.8□□□□□ -0.68
BRCA1-207ENST00000461798 ADAMTS4O75173 837 aa10.8□□□□□ -0.68
BRCA1-207ENST00000461798 SLC4A3P48751 1232 aa10.8□□□□□ -0.68
BRCA1-207ENST00000461798 EMP3P54852 163 aa10.8□□□□□ -0.68
BRCA1-207ENST00000461798 NKX3-2P78367 333 aa10.8□□□□□ -0.68
BRCA1-207ENST00000461798 ACVR2BQ13705 512 aa10.8□□□□□ -0.68
BRCA1-207ENST00000461798 CCSAPQ6IQ19 270 aaPredicted RBP10.8□□□□□ -0.68
BRCA1-207ENST00000461798 GPR153Q6NV75 609 aa10.8□□□□□ -0.68
BRCA1-207ENST00000461798 MFSD6Q6ZSS7 791 aa10.8□□□□□ -0.68
BRCA1-207ENST00000461798 KLHDC9Q8NEP7 349 aa10.8□□□□□ -0.68
BRCA1-207ENST00000461798 AGBL1Q96MI9 1066 aa10.8□□□□□ -0.68
BRCA1-207ENST00000461798 TRERF1Q96PN7 1200 aa10.8□□□□□ -0.68
BRCA1-207ENST00000461798 KATNBL1Q9H079 304 aa10.8□□□□□ -0.68
BRCA1-207ENST00000461798 RANBP17Q9H2T7 1088 aaKnown RBP10.8□□□□□ -0.68
BRCA1-207ENST00000461798 ABHD16BQ9H3Z7 469 aa10.8□□□□□ -0.68
BRCA1-207ENST00000461798 A1CFQ9NQ94 594 aaKnown RBP10.8□□□□□ -0.68
BRCA1-207ENST00000461798 RNF146Q9NTX7 359 aa10.8□□□□□ -0.68
BRCA1-207ENST00000461798 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.8□□□□□ -0.68
BRCA1-207ENST00000461798 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.8□□□□□ -0.68
BRCA1-207ENST00000461798 SOX1O00570 391 aaPredicted RBP10.79□□□□□ -0.68
BRCA1-207ENST00000461798 ZNF213O14771 459 aa10.79□□□□□ -0.68
BRCA1-207ENST00000461798 DUSP11O75319 330 aaKnown RBP10.79□□□□□ -0.68
BRCA1-207ENST00000461798 PGK1P00558 417 aa10.79□□□□□ -0.68
BRCA1-207ENST00000461798 ICAM1P05362 532 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms