RNA–Protein interactions for RNA: ENST00000461350.5

COPS7B-217, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 2

Gene COPS7B, Length 3,299 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-217ENST00000461350 REXO1L1PQ8IX06 675 aa12.7□□□□□ -0.38
COPS7B-217ENST00000461350 GMLQ99445 158 aa12.7□□□□□ -0.38
COPS7B-217ENST00000461350 TPM1P09493 284 aa12.7□□□□□ -0.38
COPS7B-217ENST00000461350 ATP2B1P20020 1258 aa12.7□□□□□ -0.38
COPS7B-217ENST00000461350 CASQ1P31415 396 aa12.7□□□□□ -0.38
COPS7B-217ENST00000461350 KIF5BP33176 963 aa12.7□□□□□ -0.38
COPS7B-217ENST00000461350 HNRNPH2P55795 449 aaKnown RBP12.7□□□□□ -0.38
COPS7B-217ENST00000461350 RASSF7Q02833 373 aa12.7□□□□□ -0.38
COPS7B-217ENST00000461350 SOGA3Q5TF21 947 aa12.7□□□□□ -0.38
COPS7B-217ENST00000461350 IDI2Q9BXS1 227 aa12.7□□□□□ -0.38
COPS7B-217ENST00000461350 PPP2R2CQ9Y2T4 447 aa12.7□□□□□ -0.38
COPS7B-217ENST00000461350 BRCA1P38398 1863 aaKnown RBP12.69□□□□□ -0.38
COPS7B-217ENST00000461350 PSME4Q14997 1843 aa12.69□□□□□ -0.38
COPS7B-217ENST00000461350 FAM205CA6NFA0 338 aa12.69□□□□□ -0.38
COPS7B-217ENST00000461350 FANCGO15287 622 aa12.69□□□□□ -0.38
COPS7B-217ENST00000461350 GRM4Q14833 912 aa12.69□□□□□ -0.38
COPS7B-217ENST00000461350 SAFBQ15424 915 aaKnown RBP eCLIP12.69□□□□□ -0.38
COPS7B-217ENST00000461350 OGFOD1Q8N543 542 aa12.69□□□□□ -0.38
COPS7B-217ENST00000461350 NEK11Q8NG66 645 aa12.69□□□□□ -0.38
COPS7B-217ENST00000461350 GPKOWQ92917 476 aaPredicted RBP eCLIP12.69□□□□□ -0.38
COPS7B-217ENST00000461350 CCDC34Q96HJ3 373 aa12.69□□□□□ -0.38
COPS7B-217ENST00000461350 CLIC6Q96NY7 704 aa12.69□□□□□ -0.38
COPS7B-217ENST00000461350 ARHGAP6O43182 974 aa12.69□□□□□ -0.38
COPS7B-217ENST00000461350 CCDC178Q5BJE1 867 aa12.69□□□□□ -0.38
COPS7B-217ENST00000461350 NOSTRINQ8IVI9 506 aa12.69□□□□□ -0.38
COPS7B-217ENST00000461350 MTMR4Q9NYA4 1195 aa12.69□□□□□ -0.38
COPS7B-217ENST00000461350 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.69□□□□□ -0.38
COPS7B-217ENST00000461350 TUBE1Q9UJT0 475 aa12.69□□□□□ -0.38
COPS7B-217ENST00000461350 SPDYE2BA6NHP3 402 aa12.68□□□□□ -0.38
COPS7B-217ENST00000461350 ADAMTS3O15072 1205 aa12.68□□□□□ -0.38
COPS7B-217ENST00000461350 CYTH3O43739 400 aa12.68□□□□□ -0.38
COPS7B-217ENST00000461350 SPDYE6P0CI01 402 aa12.68□□□□□ -0.38
COPS7B-217ENST00000461350 DLGAP5Q15398 846 aa12.68□□□□□ -0.38
COPS7B-217ENST00000461350 NOM1Q5C9Z4 860 aaKnown RBP12.68□□□□□ -0.38
COPS7B-217ENST00000461350 SHC4Q6S5L8 630 aa12.68□□□□□ -0.38
COPS7B-217ENST00000461350 CNNM3Q8NE01 707 aa12.68□□□□□ -0.38
COPS7B-217ENST00000461350 SIPA1L1O43166 1804 aa12.68□□□□□ -0.38
COPS7B-217ENST00000461350 VWA3AA6NCI4 1184 aa12.68□□□□□ -0.38
COPS7B-217ENST00000461350 USP17L5A8MUK1 530 aa12.68□□□□□ -0.38
COPS7B-217ENST00000461350 JDP2Q8WYK2 163 aa12.68□□□□□ -0.38
COPS7B-217ENST00000461350 BAG1Q99933 345 aaPredicted RBP12.68□□□□□ -0.38
COPS7B-217ENST00000461350 VEZTQ9HBM0 779 aa12.68□□□□□ -0.38
COPS7B-217ENST00000461350 FER1L6Q2WGJ9 1857 aa12.68□□□□□ -0.38
COPS7B-217ENST00000461350 FRMPD2Q68DX3 1309 aaPredicted RBP12.68□□□□□ -0.38
COPS7B-217ENST00000461350 SCG2P13521 617 aa12.68□□□□□ -0.38
COPS7B-217ENST00000461350 EARS2Q5JPH6 523 aaKnown RBP12.68□□□□□ -0.38
COPS7B-217ENST00000461350 WDR24Q96S15 920 aa12.68□□□□□ -0.38
COPS7B-217ENST00000461350 VAT1LQ9HCJ6 419 aa12.68□□□□□ -0.38
COPS7B-217ENST00000461350 ZCCHC17Q9NP64 241 aaKnown RBP12.68□□□□□ -0.38
COPS7B-217ENST00000461350 PI4KBQ9UBF8 816 aa12.68□□□□□ -0.38
COPS7B-217ENST00000461350 SWAP70Q9UH65 585 aa12.68□□□□□ -0.38
COPS7B-217ENST00000461350 CD2APQ9Y5K6 639 aa12.68□□□□□ -0.38
COPS7B-217ENST00000461350 KLRF2D3W0D1 207 aa12.67□□□□□ -0.38
COPS7B-217ENST00000461350 GDF11O95390 407 aa12.67□□□□□ -0.38
COPS7B-217ENST00000461350 OAS2P29728 719 aaKnown RBP12.67□□□□□ -0.38
COPS7B-217ENST00000461350 PRELPP51888 382 aa12.67□□□□□ -0.38
COPS7B-217ENST00000461350 PPP2R3AQ06190 1150 aa12.67□□□□□ -0.38
COPS7B-217ENST00000461350 FCHSD1Q86WN1 690 aa12.67□□□□□ -0.38
COPS7B-217ENST00000461350 CDAN1Q8IWY9 1227 aa12.67□□□□□ -0.38
COPS7B-217ENST00000461350 UBA5Q9GZZ9 404 aa12.67□□□□□ -0.38
COPS7B-217ENST00000461350 CABP5Q9NP86 173 aa12.67□□□□□ -0.38
COPS7B-217ENST00000461350 HDAC9Q9UKV0 1011 aa12.67□□□□□ -0.38
COPS7B-217ENST00000461350 PCDHA5Q9Y5H7 936 aa12.67□□□□□ -0.38
COPS7B-217ENST00000461350 MYO3BQ8WXR4 1341 aa12.67□□□□□ -0.38
COPS7B-217ENST00000461350 PALM3A6NDB9 673 aaPredicted RBP12.67□□□□□ -0.38
COPS7B-217ENST00000461350 RAD21O60216 631 aa12.67□□□□□ -0.38
COPS7B-217ENST00000461350 NT5C2P49902 561 aa12.67□□□□□ -0.38
COPS7B-217ENST00000461350 TOB1P50616 345 aaPredicted RBP12.67□□□□□ -0.38
COPS7B-217ENST00000461350 PHF20Q9BVI0 1012 aa12.67□□□□□ -0.38
COPS7B-217ENST00000461350 TRIM34Q9BYJ4 488 aa12.67□□□□□ -0.38
COPS7B-217ENST00000461350 DHX36Q9H2U1 1008 aaKnown RBP12.67□□□□□ -0.38
COPS7B-217ENST00000461350 PARP1P09874 1014 aaKnown RBP12.66□□□□□ -0.38
COPS7B-217ENST00000461350 XBP1P17861 261 aa12.66□□□□□ -0.38
COPS7B-217ENST00000461350 ADKP55263 362 aaKnown RBP12.66□□□□□ -0.38
COPS7B-217ENST00000461350 SPECC1Q5M775 1068 aa12.66□□□□□ -0.38
COPS7B-217ENST00000461350 RBM26Q5T8P6 1007 aaKnown RBP12.66□□□□□ -0.38
COPS7B-217ENST00000461350 CIAPIN1Q6FI81 312 aa12.66□□□□□ -0.38
COPS7B-217ENST00000461350 CC2D1AQ6P1N0 951 aaPredicted RBP12.66□□□□□ -0.38
COPS7B-217ENST00000461350 CSRNP1Q96S65 589 aa12.66□□□□□ -0.38
COPS7B-217ENST00000461350 ARFGAP3Q9NP61 516 aa12.66□□□□□ -0.38
COPS7B-217ENST00000461350 ZNF70Q9UC06 446 aaPredicted RBP12.66□□□□□ -0.38
COPS7B-217ENST00000461350 IGKV6D-41A0A0C4DH26 115 aa12.66□□□□□ -0.38
COPS7B-217ENST00000461350 TBC1D8O95759 1140 aa12.66□□□□□ -0.38
COPS7B-217ENST00000461350 GPS2Q13227 327 aa12.66□□□□□ -0.38
COPS7B-217ENST00000461350 KARSQ15046 597 aaKnown RBP12.66□□□□□ -0.38
COPS7B-217ENST00000461350 NPY5RQ15761 445 aa12.66□□□□□ -0.38
COPS7B-217ENST00000461350 PFKFB3Q16875 520 aaPredicted RBP12.66□□□□□ -0.38
COPS7B-217ENST00000461350 LONRF3Q496Y0 759 aa12.66□□□□□ -0.38
COPS7B-217ENST00000461350 CERKLQ49MI3 558 aaPredicted RBP12.66□□□□□ -0.38
COPS7B-217ENST00000461350 METTL16Q86W50 562 aaKnown RBP12.66□□□□□ -0.38
COPS7B-217ENST00000461350 EHD4Q9H223 541 aa12.66□□□□□ -0.38
COPS7B-217ENST00000461350 FOXP1Q9H334 677 aaPredicted RBP12.66□□□□□ -0.38
COPS7B-217ENST00000461350 ZSWIM4Q9H7M6 989 aa12.66□□□□□ -0.38
COPS7B-217ENST00000461350 KCNH3Q9ULD8 1083 aa12.66□□□□□ -0.38
COPS7B-217ENST00000461350 HPSEQ9Y251 543 aa12.66□□□□□ -0.38
COPS7B-217ENST00000461350 GOLGA6L9A6NEM1 432 aa12.66□□□□□ -0.38
COPS7B-217ENST00000461350 VGLL3A8MV65 326 aa12.66□□□□□ -0.38
COPS7B-217ENST00000461350 SASH3O75995 380 aa12.66□□□□□ -0.38
COPS7B-217ENST00000461350 EGFRP00533 1210 aa12.66□□□□□ -0.38
COPS7B-217ENST00000461350 NLRP5P59047 1200 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms