RNA–Protein interactions for RNA: ENST00000461349.5

C9orf78-202, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 3

Gene C9orf78, Length 783 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-202ENST00000461349 CYP2D6P10635 497 aa15.35■□□□□ 0.05
C9orf78-202ENST00000461349 BEX3Q00994 111 aa15.35■□□□□ 0.05
C9orf78-202ENST00000461349 ITGA7Q13683 1181 aa15.35■□□□□ 0.05
C9orf78-202ENST00000461349 POLA2Q14181 598 aa15.35■□□□□ 0.05
C9orf78-202ENST00000461349 SLC9C2Q5TAH2 1124 aa15.35■□□□□ 0.05
C9orf78-202ENST00000461349 CXCL17Q6UXB2 119 aa15.35■□□□□ 0.05
C9orf78-202ENST00000461349 ANKRD35Q8N283 1001 aa15.35■□□□□ 0.05
C9orf78-202ENST00000461349 SLC43A3Q8NBI5 491 aa15.35■□□□□ 0.05
C9orf78-202ENST00000461349 SSH3Q8TE77 659 aa15.35■□□□□ 0.05
C9orf78-202ENST00000461349 SLF1Q9BQI6 1058 aa15.35■□□□□ 0.05
C9orf78-202ENST00000461349 WNT8AQ9H1J5 351 aa15.35■□□□□ 0.05
C9orf78-202ENST00000461349 PRR33A8MZF0 331 aa15.34■□□□□ 0.05
C9orf78-202ENST00000461349 ZEB2O60315 1214 aa15.34■□□□□ 0.05
C9orf78-202ENST00000461349 ACTN1P12814 892 aa15.34■□□□□ 0.05
C9orf78-202ENST00000461349 TNFAIP2Q03169 654 aa15.34■□□□□ 0.05
C9orf78-202ENST00000461349 ARMCX2Q7L311 632 aa15.34■□□□□ 0.05
C9orf78-202ENST00000461349 ARNTL2Q8WYA1 636 aa15.34■□□□□ 0.05
C9orf78-202ENST00000461349 KHSRPQ92945 711 aaKnown RBP eCLIP15.34■□□□□ 0.05
C9orf78-202ENST00000461349 EAF2Q96CJ1 260 aaPredicted RBP15.34■□□□□ 0.05
C9orf78-202ENST00000461349 FBXO40Q9UH90 709 aa15.34■□□□□ 0.05
C9orf78-202ENST00000461349 TANC1Q9C0D5 1861 aa15.33■□□□□ 0.05
C9orf78-202ENST00000461349 CTAGE5O15320 804 aa15.33■□□□□ 0.04
C9orf78-202ENST00000461349 B4GALT4O60513 344 aa15.33■□□□□ 0.04
C9orf78-202ENST00000461349 PDE6AP16499 860 aa15.33■□□□□ 0.04
C9orf78-202ENST00000461349 MRE11P49959 708 aa15.33■□□□□ 0.04
C9orf78-202ENST00000461349 RARSP54136 660 aaKnown RBP15.33■□□□□ 0.04
C9orf78-202ENST00000461349 NKX3-2P78367 333 aa15.33■□□□□ 0.04
C9orf78-202ENST00000461349 KRT40Q6A162 431 aa15.33■□□□□ 0.04
C9orf78-202ENST00000461349 CCDC144CPQ8IYA2 1237 aa15.33■□□□□ 0.04
C9orf78-202ENST00000461349 TRMT2AQ8IZ69 625 aaKnown RBP15.33■□□□□ 0.04
C9orf78-202ENST00000461349 CPXCR1Q8N123 301 aa15.33■□□□□ 0.04
C9orf78-202ENST00000461349 LCORLQ8N3X6 602 aa15.33■□□□□ 0.04
C9orf78-202ENST00000461349 SCLYQ96I15 445 aa15.33■□□□□ 0.04
C9orf78-202ENST00000461349 SLC9A7Q96T83 725 aa15.33■□□□□ 0.04
C9orf78-202ENST00000461349 AP5M1Q9H0R1 490 aa15.33■□□□□ 0.04
C9orf78-202ENST00000461349 TRPV6Q9H1D0 765 aa15.33■□□□□ 0.04
C9orf78-202ENST00000461349 RIPK3Q9Y572 518 aa15.33■□□□□ 0.04
C9orf78-202ENST00000461349 MYH7P12883 1935 aa15.33■□□□□ 0.04
C9orf78-202ENST00000461349 GREB1LQ9C091 1923 aaPredicted RBP15.33■□□□□ 0.04
C9orf78-202ENST00000461349 KIF28PB7ZC32 967 aa15.32■□□□□ 0.04
C9orf78-202ENST00000461349 ZBED4O75132 1171 aa15.32■□□□□ 0.04
C9orf78-202ENST00000461349 BCAR3O75815 825 aa15.32■□□□□ 0.04
C9orf78-202ENST00000461349 CDK8P49336 464 aa15.32■□□□□ 0.04
C9orf78-202ENST00000461349 ATP8B2P98198 1209 aa15.32■□□□□ 0.04
C9orf78-202ENST00000461349 FSCN1Q16658 493 aaKnown RBP15.32■□□□□ 0.04
C9orf78-202ENST00000461349 CSPP1Q1MSJ5 1256 aa15.32■□□□□ 0.04
C9orf78-202ENST00000461349 TLK2Q86UE8 772 aa15.32■□□□□ 0.04
C9orf78-202ENST00000461349 PRPF38AQ8NAV1 312 aaKnown RBP15.32■□□□□ 0.04
C9orf78-202ENST00000461349 DDRGK1Q96HY6 314 aa15.32■□□□□ 0.04
C9orf78-202ENST00000461349 SNX27Q96L92 541 aa15.32■□□□□ 0.04
C9orf78-202ENST00000461349 ZNF532Q9HCE3 1301 aa15.32■□□□□ 0.04
C9orf78-202ENST00000461349 ATP2A1O14983 1001 aa15.31■□□□□ 0.04
C9orf78-202ENST00000461349 TRIM27P14373 513 aa15.31■□□□□ 0.04
C9orf78-202ENST00000461349 TTLL4Q14679 1199 aa15.31■□□□□ 0.04
C9orf78-202ENST00000461349 DEFB128Q7Z7B8 93 aa15.31■□□□□ 0.04
C9orf78-202ENST00000461349 UIMC1Q96RL1 719 aa15.31■□□□□ 0.04
C9orf78-202ENST00000461349 ATP8A2Q9NTI2 1148 aa15.31■□□□□ 0.04
C9orf78-202ENST00000461349 EPOPA6NHQ4 379 aa15.3■□□□□ 0.04
C9orf78-202ENST00000461349 SUPT20HL2P0C7V6 817 aa15.3■□□□□ 0.04
C9orf78-202ENST00000461349 TAP1Q03518 808 aa15.3■□□□□ 0.04
C9orf78-202ENST00000461349 PTPRSQ13332 1948 aa15.3■□□□□ 0.04
C9orf78-202ENST00000461349 C16orf86Q6ZW13 317 aa15.3■□□□□ 0.04
C9orf78-202ENST00000461349 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.3■□□□□ 0.04
C9orf78-202ENST00000461349 AACSQ86V21 672 aa15.3■□□□□ 0.04
C9orf78-202ENST00000461349 CHST13Q8NET6 341 aa15.3■□□□□ 0.04
C9orf78-202ENST00000461349 PHOSPHO2Q8TCD6 241 aa15.3■□□□□ 0.04
C9orf78-202ENST00000461349 FRAT1Q92837 279 aaPredicted RBP15.3■□□□□ 0.04
C9orf78-202ENST00000461349 CLUAP1Q96AJ1 413 aa15.3■□□□□ 0.04
C9orf78-202ENST00000461349 AGBL1Q96MI9 1066 aa15.3■□□□□ 0.04
C9orf78-202ENST00000461349 NUP88Q99567 741 aaPredicted RBP15.3■□□□□ 0.04
C9orf78-202ENST00000461349 ARMT1Q9H993 441 aa15.3■□□□□ 0.04
C9orf78-202ENST00000461349 NOP58Q9Y2X3 529 aaKnown RBP15.3■□□□□ 0.04
C9orf78-202ENST00000461349 BRWD1Q9NSI6 2320 aa15.29■□□□□ 0.04
C9orf78-202ENST00000461349 ASTN1O14525 1302 aa15.29■□□□□ 0.04
C9orf78-202ENST00000461349 GRIN2DO15399 1336 aa15.29■□□□□ 0.04
C9orf78-202ENST00000461349 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.29■□□□□ 0.04
C9orf78-202ENST00000461349 ALADP13716 330 aa15.29■□□□□ 0.04
C9orf78-202ENST00000461349 PSMC6P62333 389 aa15.29■□□□□ 0.04
C9orf78-202ENST00000461349 GRB10Q13322 594 aa15.29■□□□□ 0.04
C9orf78-202ENST00000461349 C12orf60Q5U649 245 aa15.29■□□□□ 0.04
C9orf78-202ENST00000461349 FGD4Q96M96 766 aa15.29■□□□□ 0.04
C9orf78-202ENST00000461349 KATNBL1Q9H079 304 aa15.29■□□□□ 0.04
C9orf78-202ENST00000461349 ALDH8A1Q9H2A2 487 aaPredicted RBP15.29■□□□□ 0.04
C9orf78-202ENST00000461349 RAVER2Q9HCJ3 691 aaKnown RBP15.29■□□□□ 0.04
C9orf78-202ENST00000461349 ASB14A6NK59 587 aa15.28■□□□□ 0.04
C9orf78-202ENST00000461349 DYNC1LI2O43237 492 aaPredicted RBP15.28■□□□□ 0.04
C9orf78-202ENST00000461349 SSTR3P32745 418 aaPredicted RBP15.28■□□□□ 0.04
C9orf78-202ENST00000461349 RFC2P35250 354 aa15.28■□□□□ 0.04
C9orf78-202ENST00000461349 ERC1Q8IUD2 1116 aa15.28■□□□□ 0.04
C9orf78-202ENST00000461349 HERC6Q8IVU3 1022 aa15.28■□□□□ 0.04
C9orf78-202ENST00000461349 GJD3Q8N144 294 aa15.28■□□□□ 0.04
C9orf78-202ENST00000461349 KIFC2Q96AC6 838 aa15.28■□□□□ 0.04
C9orf78-202ENST00000461349 CD320Q9NPF0 282 aa15.28■□□□□ 0.04
C9orf78-202ENST00000461349 GNEQ9Y223 722 aaKnown RBP15.28■□□□□ 0.04
C9orf78-202ENST00000461349 SIP14410 1827 aa15.28■□□□□ 0.04
C9orf78-202ENST00000461349 CYP2D7A0A087X1C5 515 aa15.27■□□□□ 0.04
C9orf78-202ENST00000461349 TCRBV5S4A2TA0A5A2 114 aa15.27■□□□□ 0.04
C9orf78-202ENST00000461349 USP17L12C9JPN9 530 aa15.27■□□□□ 0.04
C9orf78-202ENST00000461349 USP17L21D6R901 530 aa15.27■□□□□ 0.04
C9orf78-202ENST00000461349 F5H6K3 240 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms