RNA–Protein interactions for RNA: ENST00000461217.1

COL16A1-206, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-206ENST00000461217 ACLYP53396 1101 aa17.9■□□□□ 0.46
COL16A1-206ENST00000461217 ACVR2BQ13705 512 aa17.9■□□□□ 0.46
COL16A1-206ENST00000461217 C9orf50Q5SZB4 431 aa17.9■□□□□ 0.46
COL16A1-206ENST00000461217 ZNF697Q5TEC3 545 aa17.9■□□□□ 0.46
COL16A1-206ENST00000461217 NUP133Q8WUM0 1156 aa17.9■□□□□ 0.46
COL16A1-206ENST00000461217 TRIM43Q96BQ3 446 aaPredicted RBP17.9■□□□□ 0.46
COL16A1-206ENST00000461217 EVI5LQ96CN4 794 aa17.9■□□□□ 0.46
COL16A1-206ENST00000461217 TSEN34Q9BSV6 310 aaKnown RBP17.9■□□□□ 0.46
COL16A1-206ENST00000461217 ACAD9Q9H845 621 aa17.9■□□□□ 0.46
COL16A1-206ENST00000461217 TOMM22Q9NS69 142 aa17.9■□□□□ 0.46
COL16A1-206ENST00000461217 MTMR7Q9Y216 660 aa17.9■□□□□ 0.46
COL16A1-206ENST00000461217 MOXD2PA6NHM9 499 aa17.89■□□□□ 0.45
COL16A1-206ENST00000461217 RANBP6O60518 1105 aaKnown RBP17.89■□□□□ 0.45
COL16A1-206ENST00000461217 C6orf222P0C671 652 aaPredicted RBP17.89■□□□□ 0.45
COL16A1-206ENST00000461217 RAG1P15918 1043 aa17.89■□□□□ 0.45
COL16A1-206ENST00000461217 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.89■□□□□ 0.45
COL16A1-206ENST00000461217 ARMCX2Q7L311 632 aa17.89■□□□□ 0.45
COL16A1-206ENST00000461217 STAG1Q8WVM7 1258 aa17.89■□□□□ 0.45
COL16A1-206ENST00000461217 GMCL1Q96IK5 515 aa17.89■□□□□ 0.45
COL16A1-206ENST00000461217 ABHD16BQ9H3Z7 469 aa17.89■□□□□ 0.45
COL16A1-206ENST00000461217 SPC25Q9HBM1 224 aa17.89■□□□□ 0.45
COL16A1-206ENST00000461217 RNF146Q9NTX7 359 aa17.89■□□□□ 0.45
COL16A1-206ENST00000461217 TMEM39AQ9NV64 488 aa17.89■□□□□ 0.45
COL16A1-206ENST00000461217 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.89■□□□□ 0.45
COL16A1-206ENST00000461217 SALL3Q9BXA9 1300 aa17.89■□□□□ 0.45
COL16A1-206ENST00000461217 SMCHD1A6NHR9 2005 aa17.88■□□□□ 0.45
COL16A1-206ENST00000461217 DCDC2CA8MYV0 355 aa17.88■□□□□ 0.45
COL16A1-206ENST00000461217 POTEB2H3BUK9 544 aa17.88■□□□□ 0.45
COL16A1-206ENST00000461217 DLL1O00548 723 aa17.88■□□□□ 0.45
COL16A1-206ENST00000461217 NMT2O60551 498 aa17.88■□□□□ 0.45
COL16A1-206ENST00000461217 DUSP11O75319 330 aaKnown RBP17.88■□□□□ 0.45
COL16A1-206ENST00000461217 ALAS1P13196 640 aa17.88■□□□□ 0.45
COL16A1-206ENST00000461217 CCDC144BQ3MJ40 725 aa17.88■□□□□ 0.45
COL16A1-206ENST00000461217 VPS53Q5VIR6 699 aa17.88■□□□□ 0.45
COL16A1-206ENST00000461217 FAM109BQ6ICB4 259 aaPredicted RBP17.88■□□□□ 0.45
COL16A1-206ENST00000461217 CCDC174Q6PII3 467 aa17.88■□□□□ 0.45
COL16A1-206ENST00000461217 KCTD1Q719H9 257 aa17.88■□□□□ 0.45
COL16A1-206ENST00000461217 VTI1AQ96AJ9 217 aa17.88■□□□□ 0.45
COL16A1-206ENST00000461217 AGBL1Q96MI9 1066 aa17.88■□□□□ 0.45
COL16A1-206ENST00000461217 GLT1D1Q96MS3 346 aa17.88■□□□□ 0.45
COL16A1-206ENST00000461217 INCENPQ9NQS7 918 aa17.88■□□□□ 0.45
COL16A1-206ENST00000461217 FOXP2O15409 715 aa17.87■□□□□ 0.45
COL16A1-206ENST00000461217 KCNA10Q16322 511 aa17.87■□□□□ 0.45
COL16A1-206ENST00000461217 CCDC96Q2M329 555 aa17.87■□□□□ 0.45
COL16A1-206ENST00000461217 CCDC144CPQ8IYA2 1237 aa17.87■□□□□ 0.45
COL16A1-206ENST00000461217 PCSK9Q8NBP7 692 aaKnown RBP17.87■□□□□ 0.45
COL16A1-206ENST00000461217 FGD4Q96M96 766 aa17.87■□□□□ 0.45
COL16A1-206ENST00000461217 MYADML2A6NDP7 307 aa17.86■□□□□ 0.45
COL16A1-206ENST00000461217 KIAA0355O15063 1070 aa17.86■□□□□ 0.45
COL16A1-206ENST00000461217 ITGB8P26012 769 aa17.86■□□□□ 0.45
COL16A1-206ENST00000461217 PDE1AP54750 535 aa17.86■□□□□ 0.45
COL16A1-206ENST00000461217 SNAP25P60880 206 aa17.86■□□□□ 0.45
COL16A1-206ENST00000461217 CNTN2Q02246 1040 aa17.86■□□□□ 0.45
COL16A1-206ENST00000461217 TKFCQ3LXA3 575 aa17.86■□□□□ 0.45
COL16A1-206ENST00000461217 RRP12Q5JTH9 1297 aaKnown RBP17.86■□□□□ 0.45
COL16A1-206ENST00000461217 RCSD1Q6JBY9 416 aa17.86■□□□□ 0.45
COL16A1-206ENST00000461217 NOL8Q76FK4 1167 aaKnown RBP17.86■□□□□ 0.45
COL16A1-206ENST00000461217 RASGRP2Q7LDG7 609 aa17.86■□□□□ 0.45
COL16A1-206ENST00000461217 KLHDC9Q8NEP7 349 aa17.86■□□□□ 0.45
COL16A1-206ENST00000461217 RNPC3Q96LT9 517 aaKnown RBP17.86■□□□□ 0.45
COL16A1-206ENST00000461217 TRERF1Q96PN7 1200 aa17.86■□□□□ 0.45
COL16A1-206ENST00000461217 A1CFQ9NQ94 594 aaKnown RBP17.86■□□□□ 0.45
COL16A1-206ENST00000461217 IL17RBQ9NRM6 502 aa17.86■□□□□ 0.45
COL16A1-206ENST00000461217 HELLSQ9NRZ9 838 aa17.86■□□□□ 0.45
COL16A1-206ENST00000461217 LAMA3Q16787 3333 aa17.86■□□□□ 0.45
COL16A1-206ENST00000461217 ZNF536O15090 1300 aa17.85■□□□□ 0.45
COL16A1-206ENST00000461217 ADCY6O43306 1168 aa17.85■□□□□ 0.45
COL16A1-206ENST00000461217 ASGR1P07306 291 aa17.85■□□□□ 0.45
COL16A1-206ENST00000461217 CST5P28325 142 aaPredicted RBP17.85■□□□□ 0.45
COL16A1-206ENST00000461217 IRX5P78411 483 aaPredicted RBP17.85■□□□□ 0.45
COL16A1-206ENST00000461217 FPGSQ05932 587 aa17.85■□□□□ 0.45
COL16A1-206ENST00000461217 MROH7Q68CQ1 1323 aa17.85■□□□□ 0.45
COL16A1-206ENST00000461217 ANKRD33Q7Z3H0 272 aa17.85■□□□□ 0.45
COL16A1-206ENST00000461217 GUCD1Q96NT3 240 aa17.85■□□□□ 0.45
COL16A1-206ENST00000461217 ANAPC4Q9UJX5 808 aa17.85■□□□□ 0.45
COL16A1-206ENST00000461217 PRR12Q9ULL5 1215 aa17.85■□□□□ 0.45
COL16A1-206ENST00000461217 ASB14A6NK59 587 aa17.84■□□□□ 0.45
COL16A1-206ENST00000461217 TRIM6-TRIM34B2RNG4 842 aa17.84■□□□□ 0.45
COL16A1-206ENST00000461217 PLA2G6O60733 806 aa17.84■□□□□ 0.45
COL16A1-206ENST00000461217 IGHDP01880 384 aa17.84■□□□□ 0.45
COL16A1-206ENST00000461217 GJA9P57773 515 aa17.84■□□□□ 0.45
COL16A1-206ENST00000461217 FAAP100Q0VG06 881 aa17.84■□□□□ 0.45
COL16A1-206ENST00000461217 GNASQ5JWF2 1037 aa17.84■□□□□ 0.45
COL16A1-206ENST00000461217 CCSAPQ6IQ19 270 aaPredicted RBP17.84■□□□□ 0.45
COL16A1-206ENST00000461217 FAM133AQ8N9E0 248 aa17.84■□□□□ 0.45
COL16A1-206ENST00000461217 FAM227BQ96M60 508 aa17.84■□□□□ 0.45
COL16A1-206ENST00000461217 TOX2Q96NM4 488 aa17.84■□□□□ 0.45
COL16A1-206ENST00000461217 CCPG1Q9ULG6 757 aa17.84■□□□□ 0.45
COL16A1-206ENST00000461217 ELP1O95163 1332 aa17.83■□□□□ 0.44
COL16A1-206ENST00000461217 A0A0D9SFI3 127 aa17.83■□□□□ 0.44
COL16A1-206ENST00000461217 SOWAHBA6NEL2 793 aa17.83■□□□□ 0.44
COL16A1-206ENST00000461217 ORC4O43929 436 aa17.83■□□□□ 0.44
COL16A1-206ENST00000461217 SMAD3P84022 425 aaKnown RBP17.83■□□□□ 0.44
COL16A1-206ENST00000461217 TNFAIP2Q03169 654 aa17.83■□□□□ 0.44
COL16A1-206ENST00000461217 MCMDC2Q4G0Z9 681 aa17.83■□□□□ 0.44
COL16A1-206ENST00000461217 NSMFQ6X4W1 530 aa17.83■□□□□ 0.44
COL16A1-206ENST00000461217 DCAF4Q8WV16 495 aa17.83■□□□□ 0.44
COL16A1-206ENST00000461217 UPF3AQ9H1J1 476 aaKnown RBP17.83■□□□□ 0.44
COL16A1-206ENST00000461217 MCM3APO60318 1980 aa17.82■□□□□ 0.44
COL16A1-206ENST00000461217 DNAH12Q6ZR08 3092 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms