RNA–Protein interactions for RNA: ENST00000459990.5

SYN3-205, Transcript of synapsin III, humanhuman

TSL 4

Gene SYN3, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-205ENST00000459990 ACVR2BQ13705 512 aa11.69□□□□□ -0.54
SYN3-205ENST00000459990 KCNA10Q16322 511 aa11.69□□□□□ -0.54
SYN3-205ENST00000459990 VPS53Q5VIR6 699 aa11.69□□□□□ -0.54
SYN3-205ENST00000459990 SLFN13Q68D06 897 aa11.69□□□□□ -0.54
SYN3-205ENST00000459990 ARMCX2Q7L311 632 aa11.69□□□□□ -0.54
SYN3-205ENST00000459990 ZNF467Q7Z7K2 595 aaPredicted RBP11.69□□□□□ -0.54
SYN3-205ENST00000459990 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.69□□□□□ -0.54
SYN3-205ENST00000459990 ZNF444Q8N0Y2 327 aaPredicted RBP11.69□□□□□ -0.54
SYN3-205ENST00000459990 DDX11Q96FC9 970 aa11.69□□□□□ -0.54
SYN3-205ENST00000459990 FSD1Q9BTV5 496 aa11.69□□□□□ -0.54
SYN3-205ENST00000459990 COL25A1Q9BXS0 654 aaPredicted RBP11.69□□□□□ -0.54
SYN3-205ENST00000459990 UPF3AQ9H1J1 476 aaKnown RBP11.69□□□□□ -0.54
SYN3-205ENST00000459990 STARD7Q9NQZ5 370 aa11.69□□□□□ -0.54
SYN3-205ENST00000459990 IL17RBQ9NRM6 502 aa11.69□□□□□ -0.54
SYN3-205ENST00000459990 FEM1BQ9UK73 627 aa11.69□□□□□ -0.54
SYN3-205ENST00000459990 TBX21Q9UL17 535 aa11.69□□□□□ -0.54
SYN3-205ENST00000459990 SYNPO2Q9UMS6 1093 aa11.69□□□□□ -0.54
SYN3-205ENST00000459990 SOWAHBA6NEL2 793 aa11.68□□□□□ -0.54
SYN3-205ENST00000459990 DUSP11O75319 330 aaKnown RBP11.68□□□□□ -0.54
SYN3-205ENST00000459990 BMP3P12645 472 aa11.68□□□□□ -0.54
SYN3-205ENST00000459990 OAZ1P54368 228 aa11.68□□□□□ -0.54
SYN3-205ENST00000459990 SNAP25P60880 206 aa11.68□□□□□ -0.54
SYN3-205ENST00000459990 SMAD3P84022 425 aaKnown RBP11.68□□□□□ -0.54
SYN3-205ENST00000459990 CTDSPL2Q05D32 466 aa11.68□□□□□ -0.54
SYN3-205ENST00000459990 CCDC144BQ3MJ40 725 aa11.68□□□□□ -0.54
SYN3-205ENST00000459990 CCDC144CPQ8IYA2 1237 aa11.68□□□□□ -0.54
SYN3-205ENST00000459990 FAM133AQ8N9E0 248 aa11.68□□□□□ -0.54
SYN3-205ENST00000459990 MYLIPQ8WY64 445 aa11.68□□□□□ -0.54
SYN3-205ENST00000459990 AGBL1Q96MI9 1066 aa11.68□□□□□ -0.54
SYN3-205ENST00000459990 TSEN34Q9BSV6 310 aaKnown RBP11.68□□□□□ -0.54
SYN3-205ENST00000459990 SEMA6BQ9H3T3 888 aa11.68□□□□□ -0.54
SYN3-205ENST00000459990 A1CFQ9NQ94 594 aaKnown RBP11.68□□□□□ -0.54
SYN3-205ENST00000459990 FAM184BQ9ULE4 1060 aa11.68□□□□□ -0.54
SYN3-205ENST00000459990 TANC1Q9C0D5 1861 aa11.68□□□□□ -0.54
SYN3-205ENST00000459990 MOXD2PA6NHM9 499 aa11.67□□□□□ -0.54
SYN3-205ENST00000459990 TMEM232C9JQI7 657 aa11.67□□□□□ -0.54
SYN3-205ENST00000459990 ZBED4O75132 1171 aa11.67□□□□□ -0.54
SYN3-205ENST00000459990 ASGR1P07306 291 aa11.67□□□□□ -0.54
SYN3-205ENST00000459990 C6orf222P0C671 652 aaPredicted RBP11.67□□□□□ -0.54
SYN3-205ENST00000459990 TSPY3P0CV98 308 aa11.67□□□□□ -0.54
SYN3-205ENST00000459990 TSPY8P0CW00 308 aa11.67□□□□□ -0.54
SYN3-205ENST00000459990 RAG1P15918 1043 aa11.67□□□□□ -0.54
SYN3-205ENST00000459990 MX1P20591 662 aa11.67□□□□□ -0.54
SYN3-205ENST00000459990 CDK7P50613 346 aa11.67□□□□□ -0.54
SYN3-205ENST00000459990 STAT2P52630 851 aa11.67□□□□□ -0.54
SYN3-205ENST00000459990 GJA9P57773 515 aa11.67□□□□□ -0.54
SYN3-205ENST00000459990 TFAP4Q01664 338 aa11.67□□□□□ -0.54
SYN3-205ENST00000459990 MUM1L1Q5H9M0 696 aa11.67□□□□□ -0.54
SYN3-205ENST00000459990 TMEM63BQ5T3F8 832 aa11.67□□□□□ -0.54
SYN3-205ENST00000459990 ANKRD35Q8N283 1001 aa11.67□□□□□ -0.54
SYN3-205ENST00000459990 CHST13Q8NET6 341 aa11.67□□□□□ -0.54
SYN3-205ENST00000459990 GMCL1Q96IK5 515 aa11.67□□□□□ -0.54
SYN3-205ENST00000459990 RNPC3Q96LT9 517 aaKnown RBP11.67□□□□□ -0.54
SYN3-205ENST00000459990 PURBQ96QR8 312 aaKnown RBP11.67□□□□□ -0.54
SYN3-205ENST00000459990 NAPBQ9H115 298 aa11.67□□□□□ -0.54
SYN3-205ENST00000459990 ABHD16BQ9H3Z7 469 aa11.67□□□□□ -0.54
SYN3-205ENST00000459990 RNF146Q9NTX7 359 aa11.67□□□□□ -0.54
SYN3-205ENST00000459990 TMEM39AQ9NV64 488 aa11.67□□□□□ -0.54
SYN3-205ENST00000459990 SCN5AQ14524 2016 aa11.67□□□□□ -0.54
SYN3-205ENST00000459990 MCCP23508 829 aa11.66□□□□□ -0.54
SYN3-205ENST00000459990 NOVP48745 357 aa11.66□□□□□ -0.54
SYN3-205ENST00000459990 BEX3Q00994 111 aa11.66□□□□□ -0.54
SYN3-205ENST00000459990 FPGSQ05932 587 aa11.66□□□□□ -0.54
SYN3-205ENST00000459990 KCTD1Q719H9 257 aa11.66□□□□□ -0.54
SYN3-205ENST00000459990 C16orf59Q7L2K0 433 aa11.66□□□□□ -0.54
SYN3-205ENST00000459990 FAM126BQ8IXS8 530 aa11.66□□□□□ -0.54
SYN3-205ENST00000459990 TOX2Q96NM4 488 aa11.66□□□□□ -0.54
SYN3-205ENST00000459990 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.66□□□□□ -0.54
SYN3-205ENST00000459990 ACAD9Q9H845 621 aa11.66□□□□□ -0.54
SYN3-205ENST00000459990 UMODL1Q5DID0 1318 aa11.65□□□□□ -0.54
SYN3-205ENST00000459990 PTPRSQ13332 1948 aa11.65□□□□□ -0.54
SYN3-205ENST00000459990 ERC2O15083 957 aa11.65□□□□□ -0.54
SYN3-205ENST00000459990 SLC1A4P43007 532 aa11.65□□□□□ -0.54
SYN3-205ENST00000459990 NKX3-2P78367 333 aa11.65□□□□□ -0.54
SYN3-205ENST00000459990 PDE4BQ07343 736 aa11.65□□□□□ -0.54
SYN3-205ENST00000459990 CCDC174Q6PII3 467 aa11.65□□□□□ -0.54
SYN3-205ENST00000459990 MAFAQ8NHW3 353 aaPredicted RBP11.65□□□□□ -0.54
SYN3-205ENST00000459990 NUP133Q8WUM0 1156 aa11.65□□□□□ -0.54
SYN3-205ENST00000459990 STAG1Q8WVM7 1258 aa11.65□□□□□ -0.54
SYN3-205ENST00000459990 NACAP1Q9BZK3 213 aa11.65□□□□□ -0.54
SYN3-205ENST00000459990 ZNF287Q9HBT7 754 aa11.65□□□□□ -0.54
SYN3-205ENST00000459990 FBXO40Q9UH90 709 aa11.65□□□□□ -0.54
SYN3-205ENST00000459990 PRR12Q9ULL5 1215 aa11.65□□□□□ -0.54
SYN3-205ENST00000459990 STX8Q9UNK0 236 aa11.65□□□□□ -0.54
SYN3-205ENST00000459990 GNEQ9Y223 722 aaKnown RBP11.65□□□□□ -0.54
SYN3-205ENST00000459990 GRIN2DO15399 1336 aa11.64□□□□□ -0.55
SYN3-205ENST00000459990 ELP1O95163 1332 aa11.64□□□□□ -0.55
SYN3-205ENST00000459990 A0A0D9SFI3 127 aa11.64□□□□□ -0.55
SYN3-205ENST00000459990 TSPY2A6NKD2 308 aa11.64□□□□□ -0.55
SYN3-205ENST00000459990 TIMP1P01033 207 aa11.64□□□□□ -0.55
SYN3-205ENST00000459990 CD4P01730 458 aa11.64□□□□□ -0.55
SYN3-205ENST00000459990 ALAS1P13196 640 aa11.64□□□□□ -0.55
SYN3-205ENST00000459990 CSF2RAP15509 400 aa11.64□□□□□ -0.55
SYN3-205ENST00000459990 DNAJB2P25686 324 aa11.64□□□□□ -0.55
SYN3-205ENST00000459990 RRP1P56182 461 aaKnown RBP11.64□□□□□ -0.55
SYN3-205ENST00000459990 RASIP1Q5U651 963 aa11.64□□□□□ -0.55
SYN3-205ENST00000459990 TTBK2Q6IQ55 1244 aa11.64□□□□□ -0.55
SYN3-205ENST00000459990 ZNF589Q86UQ0 364 aaPredicted RBP11.64□□□□□ -0.55
SYN3-205ENST00000459990 FAM160B2Q86V87 743 aa11.64□□□□□ -0.55
SYN3-205ENST00000459990 FBXO16Q8IX29 292 aaPredicted RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms