RNA–Protein interactions for RNA: ENST00000458729.5

SEMA3C-205, Transcript of semaphorin 3C, humanhuman

TSL 2

Gene SEMA3C, Length 1,318 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3C-205ENST00000458729 TNS4Q8IZW8 715 aa30.09■■■□□ 2.41
SEMA3C-205ENST00000458729 MYL10Q9BUA6 226 aa30.09■■■□□ 2.41
SEMA3C-205ENST00000458729 ICAM1P05362 532 aa30.08■■■□□ 2.41
SEMA3C-205ENST00000458729 SNAP25P60880 206 aa30.08■■■□□ 2.41
SEMA3C-205ENST00000458729 TKFCQ3LXA3 575 aa30.08■■■□□ 2.41
SEMA3C-205ENST00000458729 MORN1Q5T089 497 aa30.08■■■□□ 2.41
SEMA3C-205ENST00000458729 AGXT2Q9BYV1 514 aa30.08■■■□□ 2.41
SEMA3C-205ENST00000458729 CPVLQ9H3G5 476 aa30.08■■■□□ 2.41
SEMA3C-205ENST00000458729 PTCH2Q9Y6C5 1203 aa30.08■■■□□ 2.41
SEMA3C-205ENST00000458729 DOCK3Q8IZD9 2030 aa30.08■■■□□ 2.41
SEMA3C-205ENST00000458729 DHX16O60231 1041 aaKnown RBP30.07■■■□□ 2.4
SEMA3C-205ENST00000458729 SLC4A3P48751 1232 aa30.07■■■□□ 2.4
SEMA3C-205ENST00000458729 GNAQP50148 359 aa30.07■■■□□ 2.4
SEMA3C-205ENST00000458729 APOA5Q6Q788 366 aa30.07■■■□□ 2.4
SEMA3C-205ENST00000458729 ABRAQ8N0Z2 381 aa30.07■■■□□ 2.4
SEMA3C-205ENST00000458729 CHST13Q8NET6 341 aa30.07■■■□□ 2.4
SEMA3C-205ENST00000458729 AGBL1Q96MI9 1066 aa30.07■■■□□ 2.4
SEMA3C-205ENST00000458729 LZTS2Q9BRK4 669 aa30.07■■■□□ 2.4
SEMA3C-205ENST00000458729 FBXO40Q9UH90 709 aa30.07■■■□□ 2.4
SEMA3C-205ENST00000458729 FCER1AP12319 257 aa30.06■■■□□ 2.4
SEMA3C-205ENST00000458729 RCAN1P53805 252 aa30.06■■■□□ 2.4
SEMA3C-205ENST00000458729 GRB14Q14449 540 aa30.06■■■□□ 2.4
SEMA3C-205ENST00000458729 BRF1Q92994 677 aa30.06■■■□□ 2.4
SEMA3C-205ENST00000458729 UPF3BQ9BZI7 483 aaKnown RBP30.06■■■□□ 2.4
SEMA3C-205ENST00000458729 BRPF3Q9ULD4 1205 aa30.06■■■□□ 2.4
SEMA3C-205ENST00000458729 CCPG1Q9ULG6 757 aa30.06■■■□□ 2.4
SEMA3C-205ENST00000458729 RIPK3Q9Y572 518 aa30.06■■■□□ 2.4
SEMA3C-205ENST00000458729 KLF18A0A0U1RQI7 1052 aa30.05■■■□□ 2.4
SEMA3C-205ENST00000458729 ZBTB43O43298 467 aa30.05■■■□□ 2.4
SEMA3C-205ENST00000458729 RGS2P41220 211 aa30.05■■■□□ 2.4
SEMA3C-205ENST00000458729 FANCBQ8NB91 859 aa30.05■■■□□ 2.4
SEMA3C-205ENST00000458729 USP6NLQ92738 828 aa30.05■■■□□ 2.4
SEMA3C-205ENST00000458729 JMJD4Q9H9V9 463 aa30.05■■■□□ 2.4
SEMA3C-205ENST00000458729 UPF2Q9HAU5 1272 aaKnown RBP30.05■■■□□ 2.4
SEMA3C-205ENST00000458729 VAT1LQ9HCJ6 419 aa30.05■■■□□ 2.4
SEMA3C-205ENST00000458729 XRCC5P13010 732 aaKnown RBP30.04■■■□□ 2.4
SEMA3C-205ENST00000458729 SMARCA1P28370 1054 aa30.04■■■□□ 2.4
SEMA3C-205ENST00000458729 MAP2K5Q13163 448 aa30.04■■■□□ 2.4
SEMA3C-205ENST00000458729 CDC37Q16543 378 aaPredicted RBP30.04■■■□□ 2.4
SEMA3C-205ENST00000458729 MICU3Q86XE3 530 aa30.04■■■□□ 2.4
SEMA3C-205ENST00000458729 MMP19Q99542 508 aa30.04■■■□□ 2.4
SEMA3C-205ENST00000458729 RIOX1Q9H6W3 641 aa30.04■■■□□ 2.4
SEMA3C-205ENST00000458729 PDRG1Q9NUG6 133 aa30.04■■■□□ 2.4
SEMA3C-205ENST00000458729 ALAS1P13196 640 aa30.03■■■□□ 2.4
SEMA3C-205ENST00000458729 KCTD2Q14681 263 aa30.03■■■□□ 2.4
SEMA3C-205ENST00000458729 DHX30Q7L2E3 1194 aaKnown RBP eCLIP30.03■■■□□ 2.4
SEMA3C-205ENST00000458729 PXYLP1Q8TE99 480 aa30.03■■■□□ 2.4
SEMA3C-205ENST00000458729 RBM28Q9NW13 759 aaKnown RBP30.03■■■□□ 2.4
SEMA3C-205ENST00000458729 HPS5Q9UPZ3 1129 aa30.03■■■□□ 2.4
SEMA3C-205ENST00000458729 RXRAP19793 462 aa30.02■■■□□ 2.4
SEMA3C-205ENST00000458729 CYP2B6P20813 491 aa30.02■■■□□ 2.4
SEMA3C-205ENST00000458729 ADORA2AP29274 412 aa30.02■■■□□ 2.4
SEMA3C-205ENST00000458729 APOBRQ0VD83 1088 aa30.02■■■□□ 2.4
SEMA3C-205ENST00000458729 SLAIN1Q8ND83 568 aa30.02■■■□□ 2.4
SEMA3C-205ENST00000458729 MTMR8Q96EF0 704 aa30.02■■■□□ 2.4
SEMA3C-205ENST00000458729 TRERF1Q96PN7 1200 aa30.02■■■□□ 2.4
SEMA3C-205ENST00000458729 C22orf23Q9BZE7 217 aa30.02■■■□□ 2.4
SEMA3C-205ENST00000458729 ACAD9Q9H845 621 aa30.02■■■□□ 2.4
SEMA3C-205ENST00000458729 RNF146Q9NTX7 359 aa30.02■■■□□ 2.4
SEMA3C-205ENST00000458729 SLC5A4Q9NY91 659 aa30.02■■■□□ 2.4
SEMA3C-205ENST00000458729 ADCY3O60266 1144 aa30.01■■■□□ 2.4
SEMA3C-205ENST00000458729 GRK4P32298 578 aa30.01■■■□□ 2.4
SEMA3C-205ENST00000458729 PPP2R5BQ15173 497 aa30.01■■■□□ 2.4
SEMA3C-205ENST00000458729 SLC9C1Q4G0N8 1177 aa30.01■■■□□ 2.4
SEMA3C-205ENST00000458729 NBPF11Q86T75 865 aa30.01■■■□□ 2.4
SEMA3C-205ENST00000458729 DPP9Q86TI2 863 aa30.01■■■□□ 2.4
SEMA3C-205ENST00000458729 RAB11FIP4Q86YS3 637 aa30.01■■■□□ 2.4
SEMA3C-205ENST00000458729 CCDC144CPQ8IYA2 1237 aa30.01■■■□□ 2.4
SEMA3C-205ENST00000458729 TRMT44Q8IYL2 757 aaKnown RBP30.01■■■□□ 2.4
SEMA3C-205ENST00000458729 APBA2Q99767 749 aa30.01■■■□□ 2.4
SEMA3C-205ENST00000458729 SPZ1Q9BXG8 430 aa30.01■■■□□ 2.4
SEMA3C-205ENST00000458729 HOMER2Q9NSB8 354 aa30.01■■■□□ 2.4
SEMA3C-205ENST00000458729 NAP1L2Q9ULW6 460 aaPredicted RBP30.01■■■□□ 2.4
SEMA3C-205ENST00000458729 HOXC6P09630 235 aa30■■■□□ 2.39
SEMA3C-205ENST00000458729 EVCP57679 992 aa30■■■□□ 2.39
SEMA3C-205ENST00000458729 QRICH1Q2TAL8 776 aa30■■■□□ 2.39
SEMA3C-205ENST00000458729 ALDH8A1Q9H2A2 487 aaPredicted RBP30■■■□□ 2.39
SEMA3C-205ENST00000458729 PLXNB2O15031 1838 aa30■■■□□ 2.39
SEMA3C-205ENST00000458729 ZBTB5O15062 677 aa29.99■■■□□ 2.39
SEMA3C-205ENST00000458729 TOB2Q14106 344 aaPredicted RBP29.99■■■□□ 2.39
SEMA3C-205ENST00000458729 RTN1Q16799 776 aa29.99■■■□□ 2.39
SEMA3C-205ENST00000458729 GOLGA8AA7E2F4 631 aa29.98■■■□□ 2.39
SEMA3C-205ENST00000458729 GOLGA8BA8MQT2 603 aa29.98■■■□□ 2.39
SEMA3C-205ENST00000458729 CYTH3O43739 400 aa29.98■■■□□ 2.39
SEMA3C-205ENST00000458729 RBM25P49756 843 aaKnown RBP29.98■■■□□ 2.39
SEMA3C-205ENST00000458729 TRAF1Q13077 416 aa29.98■■■□□ 2.39
SEMA3C-205ENST00000458729 SLC35G1Q2M3R5 365 aa29.98■■■□□ 2.39
SEMA3C-205ENST00000458729 TMTC3Q6ZXV5 915 aa29.98■■■□□ 2.39
SEMA3C-205ENST00000458729 FBXO11Q86XK2 927 aa29.98■■■□□ 2.39
SEMA3C-205ENST00000458729 ANKRD35Q8N283 1001 aa29.98■■■□□ 2.39
SEMA3C-205ENST00000458729 DDX11Q96FC9 970 aa29.98■■■□□ 2.39
SEMA3C-205ENST00000458729 ZNF236Q9UL36 1845 aa29.98■■■□□ 2.39
SEMA3C-205ENST00000458729 CCDC196A0A1B0GTZ2 297 aa29.97■■■□□ 2.39
SEMA3C-205ENST00000458729 METAP2P50579 478 aaKnown RBP eCLIP29.97■■■□□ 2.39
SEMA3C-205ENST00000458729 SRBD1Q8N5C6 995 aaKnown RBP29.97■■■□□ 2.39
SEMA3C-205ENST00000458729 ABHD8Q96I13 439 aa29.97■■■□□ 2.39
SEMA3C-205ENST00000458729 AMNQ9BXJ7 453 aa29.97■■■□□ 2.39
SEMA3C-205ENST00000458729 PNMA6FA0A0J9YX94 578 aa29.96■■■□□ 2.39
SEMA3C-205ENST00000458729 PLEKHA8P1O95397 391 aa29.96■■■□□ 2.39
SEMA3C-205ENST00000458729 ANKRD1Q15327 319 aa29.96■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms