RNA–Protein interactions for RNA: ENST00000458085.6

CAPN13-203, Transcript of calpain 13, humanhuman

TSL 5

Gene CAPN13, Length 2,269 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN13-203ENST00000458085 VEZTQ9HBM0 779 aa18.61■□□□□ 0.57
CAPN13-203ENST00000458085 MAN1B1Q9UKM7 699 aa18.61■□□□□ 0.57
CAPN13-203ENST00000458085 AFMP43652 599 aa18.61■□□□□ 0.57
CAPN13-203ENST00000458085 SARSP49591 514 aaKnown RBP18.61■□□□□ 0.57
CAPN13-203ENST00000458085 NONOQ15233 471 aaKnown RBP eCLIP18.61■□□□□ 0.57
CAPN13-203ENST00000458085 ARL6IP4Q66PJ3 421 aaKnown RBP18.61■□□□□ 0.57
CAPN13-203ENST00000458085 SARM1Q6SZW1 724 aa18.61■□□□□ 0.57
CAPN13-203ENST00000458085 KRT25Q7Z3Z0 450 aa18.61■□□□□ 0.57
CAPN13-203ENST00000458085 MTMR8Q96EF0 704 aa18.61■□□□□ 0.57
CAPN13-203ENST00000458085 NUP88Q99567 741 aaPredicted RBP18.61■□□□□ 0.57
CAPN13-203ENST00000458085 SCAF8Q9UPN6 1271 aaKnown RBP18.61■□□□□ 0.57
CAPN13-203ENST00000458085 SLC1A4P43007 532 aa18.6■□□□□ 0.57
CAPN13-203ENST00000458085 LETM2Q2VYF4 491 aa18.6■□□□□ 0.57
CAPN13-203ENST00000458085 NT5DC1Q5TFE4 455 aa18.6■□□□□ 0.57
CAPN13-203ENST00000458085 REXO1Q8N1G1 1221 aaKnown RBP18.6■□□□□ 0.57
CAPN13-203ENST00000458085 AGBL3Q8NEM8 1001 aa18.6■□□□□ 0.57
CAPN13-203ENST00000458085 FAM151AQ8WW52 585 aa18.6■□□□□ 0.57
CAPN13-203ENST00000458085 TMEM39BQ9GZU3 492 aa18.6■□□□□ 0.57
CAPN13-203ENST00000458085 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.6■□□□□ 0.57
CAPN13-203ENST00000458085 A0A1W2PRG0 241 aa18.6■□□□□ 0.57
CAPN13-203ENST00000458085 hCG_1984214I3L0E3 225 aa18.6■□□□□ 0.57
CAPN13-203ENST00000458085 SLFN14P0C7P3 912 aa18.6■□□□□ 0.57
CAPN13-203ENST00000458085 E2F4Q16254 413 aa18.6■□□□□ 0.57
CAPN13-203ENST00000458085 PPP4R3BQ5MIZ7 849 aa18.6■□□□□ 0.57
CAPN13-203ENST00000458085 RBM26Q5T8P6 1007 aaKnown RBP18.6■□□□□ 0.57
CAPN13-203ENST00000458085 SH3RF1Q7Z6J0 888 aa18.6■□□□□ 0.57
CAPN13-203ENST00000458085 ZNF713Q8N859 430 aaPredicted RBP18.6■□□□□ 0.57
CAPN13-203ENST00000458085 TBCKQ8TEA7 893 aa18.6■□□□□ 0.57
CAPN13-203ENST00000458085 NRBP1Q9UHY1 535 aa18.6■□□□□ 0.57
CAPN13-203ENST00000458085 PP2D1A8MPX8 630 aa18.59■□□□□ 0.57
CAPN13-203ENST00000458085 F5H6K3 240 aa18.59■□□□□ 0.57
CAPN13-203ENST00000458085 EDIL3O43854 480 aa18.59■□□□□ 0.57
CAPN13-203ENST00000458085 KLRC3Q07444 240 aa18.59■□□□□ 0.57
CAPN13-203ENST00000458085 NBPF9Q3BBW0 867 aa18.59■□□□□ 0.57
CAPN13-203ENST00000458085 STAMQ92783 540 aa18.59■□□□□ 0.57
CAPN13-203ENST00000458085 PAGE5Q96GU1 130 aa18.59■□□□□ 0.57
CAPN13-203ENST00000458085 SGIP1Q9BQI5 828 aa18.59■□□□□ 0.57
CAPN13-203ENST00000458085 HSD3B7Q9H2F3 369 aa18.59■□□□□ 0.57
CAPN13-203ENST00000458085 ARFGEF1Q9Y6D6 1849 aa18.59■□□□□ 0.57
CAPN13-203ENST00000458085 ZBTB5O15062 677 aa18.58■□□□□ 0.57
CAPN13-203ENST00000458085 CCNT1O60563 726 aaKnown RBP18.58■□□□□ 0.57
CAPN13-203ENST00000458085 ADCY7P51828 1080 aa18.58■□□□□ 0.57
CAPN13-203ENST00000458085 SPATA20Q8TB22 786 aa18.58■□□□□ 0.57
CAPN13-203ENST00000458085 DCAF4Q8WV16 495 aa18.58■□□□□ 0.57
CAPN13-203ENST00000458085 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.58■□□□□ 0.57
CAPN13-203ENST00000458085 HOOK1Q9UJC3 728 aaKnown RBP18.58■□□□□ 0.57
CAPN13-203ENST00000458085 WNT10BO00744 389 aa18.58■□□□□ 0.56
CAPN13-203ENST00000458085 NDUFB10O96000 172 aa18.58■□□□□ 0.56
CAPN13-203ENST00000458085 UBE2SQ16763 222 aa18.58■□□□□ 0.56
CAPN13-203ENST00000458085 CIAPIN1Q6FI81 312 aa18.58■□□□□ 0.56
CAPN13-203ENST00000458085 NEK8Q86SG6 692 aa18.58■□□□□ 0.56
CAPN13-203ENST00000458085 SMARCE1Q969G3 411 aa18.58■□□□□ 0.56
CAPN13-203ENST00000458085 ZBED3Q96IU2 234 aaPredicted RBP18.58■□□□□ 0.56
CAPN13-203ENST00000458085 KCNF1Q9H3M0 494 aa18.58■□□□□ 0.56
CAPN13-203ENST00000458085 BCS1LQ9Y276 419 aa18.58■□□□□ 0.56
CAPN13-203ENST00000458085 EGFRP00533 1210 aa18.57■□□□□ 0.56
CAPN13-203ENST00000458085 LONP1P36776 959 aaKnown RBP18.57■□□□□ 0.56
CAPN13-203ENST00000458085 SNAP25P60880 206 aa18.57■□□□□ 0.56
CAPN13-203ENST00000458085 QRICH1Q2TAL8 776 aa18.57■□□□□ 0.56
CAPN13-203ENST00000458085 KANK3Q6NY19 840 aa18.57■□□□□ 0.56
CAPN13-203ENST00000458085 MTMR14Q8NCE2 650 aa18.57■□□□□ 0.56
CAPN13-203ENST00000458085 MTRQ99707 1265 aa18.57■□□□□ 0.56
CAPN13-203ENST00000458085 HERC5Q9UII4 1024 aaKnown RBP18.57■□□□□ 0.56
CAPN13-203ENST00000458085 ECE1P42892 770 aa18.57■□□□□ 0.56
CAPN13-203ENST00000458085 PRELPP51888 382 aa18.57■□□□□ 0.56
CAPN13-203ENST00000458085 MORC3Q14149 939 aa18.57■□□□□ 0.56
CAPN13-203ENST00000458085 DTHD1Q6ZMT9 781 aa18.57■□□□□ 0.56
CAPN13-203ENST00000458085 MIGA2Q7L4E1 593 aa18.57■□□□□ 0.56
CAPN13-203ENST00000458085 PTGS1P23219 599 aa18.56■□□□□ 0.56
CAPN13-203ENST00000458085 RASSF7Q02833 373 aa18.56■□□□□ 0.56
CAPN13-203ENST00000458085 KARSQ15046 597 aaKnown RBP18.56■□□□□ 0.56
CAPN13-203ENST00000458085 PDXDC2PQ6P474 469 aa18.56■□□□□ 0.56
CAPN13-203ENST00000458085 DRC7Q8IY82 874 aa18.56■□□□□ 0.56
CAPN13-203ENST00000458085 GMCL1P1Q8NEA9 526 aa18.56■□□□□ 0.56
CAPN13-203ENST00000458085 JDP2Q8WYK2 163 aa18.56■□□□□ 0.56
CAPN13-203ENST00000458085 RIC8AQ9NPQ8 531 aa18.56■□□□□ 0.56
CAPN13-203ENST00000458085 PSDA5PKW4 1024 aaPredicted RBP18.56■□□□□ 0.56
CAPN13-203ENST00000458085 CCDC144BQ3MJ40 725 aa18.56■□□□□ 0.56
CAPN13-203ENST00000458085 KIAA1755Q5JYT7 1200 aa18.56■□□□□ 0.56
CAPN13-203ENST00000458085 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.56■□□□□ 0.56
CAPN13-203ENST00000458085 SPICE1Q8N0Z3 855 aa18.56■□□□□ 0.56
CAPN13-203ENST00000458085 ACER1Q8TDN7 264 aa18.56■□□□□ 0.56
CAPN13-203ENST00000458085 PGAP2Q9UHJ9 254 aa18.56■□□□□ 0.56
CAPN13-203ENST00000458085 IKBKBO14920 756 aa18.55■□□□□ 0.56
CAPN13-203ENST00000458085 LMOD1P29536 600 aaPredicted RBP18.55■□□□□ 0.56
CAPN13-203ENST00000458085 CLK2P49760 499 aaKnown RBP18.55■□□□□ 0.56
CAPN13-203ENST00000458085 DPYDQ12882 1025 aa18.55■□□□□ 0.56
CAPN13-203ENST00000458085 CDC37Q16543 378 aaPredicted RBP18.55■□□□□ 0.56
CAPN13-203ENST00000458085 CCDC186Q7Z3E2 898 aa18.55■□□□□ 0.56
CAPN13-203ENST00000458085 POTEDQ86YR6 584 aa18.55■□□□□ 0.56
CAPN13-203ENST00000458085 MRFAP1L1Q96HT8 127 aa18.55■□□□□ 0.56
CAPN13-203ENST00000458085 MYOZ2Q9NPC6 264 aa18.55■□□□□ 0.56
CAPN13-203ENST00000458085 NEMFO60524 1076 aa18.54■□□□□ 0.56
CAPN13-203ENST00000458085 OR52Z1P0C646 297 aa18.54■□□□□ 0.56
CAPN13-203ENST00000458085 ATP1A3P13637 1013 aa18.54■□□□□ 0.56
CAPN13-203ENST00000458085 TAL1P17542 331 aaPredicted RBP18.54■□□□□ 0.56
CAPN13-203ENST00000458085 FMR1Q06787 632 aaKnown RBP eCLIP18.54■□□□□ 0.56
CAPN13-203ENST00000458085 PPP1R18Q6NYC8 613 aa18.54■□□□□ 0.56
CAPN13-203ENST00000458085 IQUBQ8NA54 791 aa18.54■□□□□ 0.56
CAPN13-203ENST00000458085 LRRC15Q8TF66 581 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms