RNA–Protein interactions for RNA: ENST00000457482.7

TCF4-204, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-204ENST00000457482 TRIM34Q9BYJ4 488 aa12.96□□□□□ -0.33
TCF4-204ENST00000457482 HSD3B7Q9H2F3 369 aa12.96□□□□□ -0.33
TCF4-204ENST00000457482 PPP1R1BQ9UD71 204 aaPredicted RBP12.96□□□□□ -0.33
TCF4-204ENST00000457482 SHTN1A0MZ66 631 aa12.95□□□□□ -0.34
TCF4-204ENST00000457482 USP17L10C9JJH3 530 aa12.95□□□□□ -0.34
TCF4-204ENST00000457482 GALNT17Q6IS24 598 aa12.95□□□□□ -0.34
TCF4-204ENST00000457482 CSRNP1Q96S65 589 aa12.95□□□□□ -0.34
TCF4-204ENST00000457482 BPIFA3Q9BQP9 254 aa12.95□□□□□ -0.34
TCF4-204ENST00000457482 PP2D1A8MPX8 630 aa12.95□□□□□ -0.34
TCF4-204ENST00000457482 SARSP49591 514 aaKnown RBP12.95□□□□□ -0.34
TCF4-204ENST00000457482 CCDC144BQ3MJ40 725 aa12.95□□□□□ -0.34
TCF4-204ENST00000457482 C6orf50Q9HD87 102 aa12.95□□□□□ -0.34
TCF4-204ENST00000457482 SCAF8Q9UPN6 1271 aaKnown RBP12.95□□□□□ -0.34
TCF4-204ENST00000457482 ATRNL1Q5VV63 1379 aa12.95□□□□□ -0.34
TCF4-204ENST00000457482 ZNF500O60304 480 aaPredicted RBP12.94□□□□□ -0.34
TCF4-204ENST00000457482 ENTPD3O75355 529 aa12.94□□□□□ -0.34
TCF4-204ENST00000457482 SLFN14P0C7P3 912 aa12.94□□□□□ -0.34
TCF4-204ENST00000457482 LETM2Q2VYF4 491 aa12.94□□□□□ -0.34
TCF4-204ENST00000457482 SOGA3Q5TF21 947 aa12.94□□□□□ -0.34
TCF4-204ENST00000457482 NT5DC1Q5TFE4 455 aa12.94□□□□□ -0.34
TCF4-204ENST00000457482 CCDC186Q7Z3E2 898 aa12.94□□□□□ -0.34
TCF4-204ENST00000457482 ELOA2Q8IYF1 753 aaPredicted RBP12.94□□□□□ -0.34
TCF4-204ENST00000457482 CCDC12Q8WUD4 166 aaPredicted RBP12.94□□□□□ -0.34
TCF4-204ENST00000457482 PAGE5Q96GU1 130 aa12.94□□□□□ -0.34
TCF4-204ENST00000457482 NUP88Q99567 741 aaPredicted RBP12.94□□□□□ -0.34
TCF4-204ENST00000457482 ZNF70Q9UC06 446 aaPredicted RBP12.94□□□□□ -0.34
TCF4-204ENST00000457482 GH2P01242 217 aa12.94□□□□□ -0.34
TCF4-204ENST00000457482 ATP1A3P13637 1013 aa12.94□□□□□ -0.34
TCF4-204ENST00000457482 LMOD1P29536 600 aaPredicted RBP12.94□□□□□ -0.34
TCF4-204ENST00000457482 ICA1Q05084 483 aa12.94□□□□□ -0.34
TCF4-204ENST00000457482 E2F4Q16254 413 aa12.94□□□□□ -0.34
TCF4-204ENST00000457482 ABCB5Q2M3G0 1257 aa12.94□□□□□ -0.34
TCF4-204ENST00000457482 SH3RF1Q7Z6J0 888 aa12.94□□□□□ -0.34
TCF4-204ENST00000457482 REXO1Q8N1G1 1221 aaKnown RBP12.94□□□□□ -0.34
TCF4-204ENST00000457482 SMARCE1Q969G3 411 aa12.94□□□□□ -0.34
TCF4-204ENST00000457482 KANSL2Q9H9L4 492 aa12.94□□□□□ -0.34
TCF4-204ENST00000457482 PIM2Q9P1W9 311 aa12.94□□□□□ -0.34
TCF4-204ENST00000457482 ARFGEF1Q9Y6D6 1849 aa12.94□□□□□ -0.34
TCF4-204ENST00000457482 BRCA1P38398 1863 aaKnown RBP12.93□□□□□ -0.34
TCF4-204ENST00000457482 CNTNAP1P78357 1384 aa12.93□□□□□ -0.34
TCF4-204ENST00000457482 CCNT1O60563 726 aaKnown RBP12.93□□□□□ -0.34
TCF4-204ENST00000457482 GNA11P29992 359 aa12.93□□□□□ -0.34
TCF4-204ENST00000457482 SNAP25P60880 206 aa12.93□□□□□ -0.34
TCF4-204ENST00000457482 CXCL9Q07325 125 aa12.93□□□□□ -0.34
TCF4-204ENST00000457482 LRMPQ12912 555 aa12.93□□□□□ -0.34
TCF4-204ENST00000457482 NONOQ15233 471 aaKnown RBP eCLIP12.93□□□□□ -0.34
TCF4-204ENST00000457482 DLGAP5Q15398 846 aa12.93□□□□□ -0.34
TCF4-204ENST00000457482 UBE2SQ16763 222 aa12.93□□□□□ -0.34
TCF4-204ENST00000457482 GRIPAP1Q4V328 841 aa12.93□□□□□ -0.34
TCF4-204ENST00000457482 ARL6IP4Q66PJ3 421 aaKnown RBP12.93□□□□□ -0.34
TCF4-204ENST00000457482 NIM1KQ8IY84 436 aa12.93□□□□□ -0.34
TCF4-204ENST00000457482 TBCKQ8TEA7 893 aa12.93□□□□□ -0.34
TCF4-204ENST00000457482 MKL1Q969V6 931 aa12.93□□□□□ -0.34
TCF4-204ENST00000457482 MTRQ99707 1265 aa12.93□□□□□ -0.34
TCF4-204ENST00000457482 NYAP2Q9P242 653 aa12.93□□□□□ -0.34
TCF4-204ENST00000457482 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.93□□□□□ -0.34
TCF4-204ENST00000457482 ZNRF3Q9ULT6 936 aa12.93□□□□□ -0.34
TCF4-204ENST00000457482 PYCARDQ9ULZ3 195 aa12.93□□□□□ -0.34
TCF4-204ENST00000457482 SMCHD1A6NHR9 2005 aa12.93□□□□□ -0.34
TCF4-204ENST00000457482 PNMA6FA0A0J9YX94 578 aa12.93□□□□□ -0.34
TCF4-204ENST00000457482 EDIL3O43854 480 aa12.93□□□□□ -0.34
TCF4-204ENST00000457482 SLC1A4P43007 532 aa12.93□□□□□ -0.34
TCF4-204ENST00000457482 FMR1Q06787 632 aaKnown RBP eCLIP12.93□□□□□ -0.34
TCF4-204ENST00000457482 MORC3Q14149 939 aa12.93□□□□□ -0.34
TCF4-204ENST00000457482 ARID5BQ14865 1188 aa12.93□□□□□ -0.34
TCF4-204ENST00000457482 KARSQ15046 597 aaKnown RBP12.93□□□□□ -0.34
TCF4-204ENST00000457482 GPATCH4Q5T3I0 446 aaKnown RBP12.93□□□□□ -0.34
TCF4-204ENST00000457482 SLFN13Q68D06 897 aa12.93□□□□□ -0.34
TCF4-204ENST00000457482 KRT25Q7Z3Z0 450 aa12.93□□□□□ -0.34
TCF4-204ENST00000457482 SPATA20Q8TB22 786 aa12.93□□□□□ -0.34
TCF4-204ENST00000457482 VEZTQ9HBM0 779 aa12.93□□□□□ -0.34
TCF4-204ENST00000457482 HOOK1Q9UJC3 728 aaKnown RBP12.93□□□□□ -0.34
TCF4-204ENST00000457482 FER1L6Q2WGJ9 1857 aa12.92□□□□□ -0.34
TCF4-204ENST00000457482 A0A1W2PRG0 241 aa12.92□□□□□ -0.34
TCF4-204ENST00000457482 ESYT2A0FGR8 921 aa12.92□□□□□ -0.34
TCF4-204ENST00000457482 ADCY7P51828 1080 aa12.92□□□□□ -0.34
TCF4-204ENST00000457482 HSP90AA4PQ58FG1 418 aa12.92□□□□□ -0.34
TCF4-204ENST00000457482 PDXDC2PQ6P474 469 aa12.92□□□□□ -0.34
TCF4-204ENST00000457482 TMEM179Q6ZVK1 233 aa12.92□□□□□ -0.34
TCF4-204ENST00000457482 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.92□□□□□ -0.34
TCF4-204ENST00000457482 OGFOD1Q8N543 542 aa12.92□□□□□ -0.34
TCF4-204ENST00000457482 MRFAP1L1Q96HT8 127 aa12.92□□□□□ -0.34
TCF4-204ENST00000457482 PLIN2Q99541 437 aa12.92□□□□□ -0.34
TCF4-204ENST00000457482 TMEM39BQ9GZU3 492 aa12.92□□□□□ -0.34
TCF4-204ENST00000457482 BLZF1Q9H2G9 400 aa12.92□□□□□ -0.34
TCF4-204ENST00000457482 MYH7BA7E2Y1 1941 aa12.92□□□□□ -0.34
TCF4-204ENST00000457482 ZBTB5O15062 677 aa12.92□□□□□ -0.34
TCF4-204ENST00000457482 TAL1P17542 331 aaPredicted RBP12.92□□□□□ -0.34
TCF4-204ENST00000457482 KANK3Q6NY19 840 aa12.92□□□□□ -0.34
TCF4-204ENST00000457482 DTHD1Q6ZMT9 781 aa12.92□□□□□ -0.34
TCF4-204ENST00000457482 NEK8Q86SG6 692 aa12.92□□□□□ -0.34
TCF4-204ENST00000457482 TRMT44Q8IYL2 757 aaKnown RBP12.92□□□□□ -0.34
TCF4-204ENST00000457482 SMYD4Q8IYR2 804 aaPredicted RBP12.92□□□□□ -0.34
TCF4-204ENST00000457482 MTMR8Q96EF0 704 aa12.92□□□□□ -0.34
TCF4-204ENST00000457482 MED15Q96RN5 788 aa12.92□□□□□ -0.34
TCF4-204ENST00000457482 XPO4Q9C0E2 1151 aaKnown RBP12.92□□□□□ -0.34
TCF4-204ENST00000457482 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.92□□□□□ -0.34
TCF4-204ENST00000457482 IFNKQ9P0W0 207 aa12.92□□□□□ -0.34
TCF4-204ENST00000457482 GOLGA6L6A8MZA4 724 aa12.91□□□□□ -0.34
TCF4-204ENST00000457482 F5H6K3 240 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms