RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 CPVLQ9H3G5 476 aa20.75■□□□□ 0.91
SEMA3B-209ENST00000456560 ITIH6Q6UXX5 1313 aa20.74■□□□□ 0.91
SEMA3B-209ENST00000456560 EZH2Q15910 746 aaKnown RBP20.74■□□□□ 0.91
SEMA3B-209ENST00000456560 LRRN4CLQ8ND94 238 aa20.74■□□□□ 0.91
SEMA3B-209ENST00000456560 NELFBQ8WX92 580 aa20.74■□□□□ 0.91
SEMA3B-209ENST00000456560 PP2D1A8MPX8 630 aa20.74■□□□□ 0.91
SEMA3B-209ENST00000456560 COBLO75128 1261 aa20.74■□□□□ 0.91
SEMA3B-209ENST00000456560 KRT31Q15323 416 aa20.74■□□□□ 0.91
SEMA3B-209ENST00000456560 PPFIBP1Q86W92 1011 aa20.74■□□□□ 0.91
SEMA3B-209ENST00000456560 CEP95Q96GE4 821 aa20.74■□□□□ 0.91
SEMA3B-209ENST00000456560 LRRC37AA6NMS7 1700 aa20.74■□□□□ 0.91
SEMA3B-209ENST00000456560 FOCADQ5VW36 1801 aa20.73■□□□□ 0.91
SEMA3B-209ENST00000456560 SPAG1Q07617 926 aa20.73■□□□□ 0.91
SEMA3B-209ENST00000456560 USP17L2Q6R6M4 530 aa20.73■□□□□ 0.91
SEMA3B-209ENST00000456560 KRT25Q7Z3Z0 450 aa20.73■□□□□ 0.91
SEMA3B-209ENST00000456560 CCDC12Q8WUD4 166 aaPredicted RBP20.73■□□□□ 0.91
SEMA3B-209ENST00000456560 NAA15Q9BXJ9 866 aaKnown RBP20.73■□□□□ 0.91
SEMA3B-209ENST00000456560 GDAQ9Y2T3 454 aa20.73■□□□□ 0.91
SEMA3B-209ENST00000456560 POLRMTO00411 1230 aaKnown RBP20.73■□□□□ 0.91
SEMA3B-209ENST00000456560 PRCPP42785 496 aa20.73■□□□□ 0.91
SEMA3B-209ENST00000456560 NAPAP54920 295 aa20.73■□□□□ 0.91
SEMA3B-209ENST00000456560 DEFB132Q7Z7B7 95 aa20.73■□□□□ 0.91
SEMA3B-209ENST00000456560 KRT222Q8N1A0 295 aa20.73■□□□□ 0.91
SEMA3B-209ENST00000456560 RRP36Q96EU6 259 aaKnown RBP20.73■□□□□ 0.91
SEMA3B-209ENST00000456560 KBTBD4Q9NVX7 518 aa20.73■□□□□ 0.91
SEMA3B-209ENST00000456560 DAGLAQ9Y4D2 1042 aa20.73■□□□□ 0.91
SEMA3B-209ENST00000456560 PARP3Q9Y6F1 533 aa20.73■□□□□ 0.91
SEMA3B-209ENST00000456560 KLRC4O43908 158 aa20.72■□□□□ 0.91
SEMA3B-209ENST00000456560 MYL1P05976 194 aa20.72■□□□□ 0.91
SEMA3B-209ENST00000456560 FECHP22830 423 aa20.72■□□□□ 0.91
SEMA3B-209ENST00000456560 KCNB1Q14721 858 aa20.72■□□□□ 0.91
SEMA3B-209ENST00000456560 FBXO38Q6PIJ6 1188 aa20.72■□□□□ 0.91
SEMA3B-209ENST00000456560 ADSSL1Q8N142 457 aa20.72■□□□□ 0.91
SEMA3B-209ENST00000456560 C6orf50Q9HD87 102 aa20.72■□□□□ 0.91
SEMA3B-209ENST00000456560 SMCO2A6NFE2 343 aa20.72■□□□□ 0.91
SEMA3B-209ENST00000456560 MFAP3LO75121 409 aa20.72■□□□□ 0.91
SEMA3B-209ENST00000456560 UBA7P41226 1012 aa20.72■□□□□ 0.91
SEMA3B-209ENST00000456560 COPB1P53618 953 aaKnown RBP20.72■□□□□ 0.91
SEMA3B-209ENST00000456560 SEMA3FQ13275 785 aa20.72■□□□□ 0.91
SEMA3B-209ENST00000456560 MTF1Q14872 753 aa20.72■□□□□ 0.91
SEMA3B-209ENST00000456560 SP8Q8IXZ3 490 aa20.72■□□□□ 0.91
SEMA3B-209ENST00000456560 SRRTQ9BXP5 876 aaKnown RBP20.72■□□□□ 0.91
SEMA3B-209ENST00000456560 PLIN4Q96Q06 1357 aa20.71■□□□□ 0.91
SEMA3B-209ENST00000456560 SOWAHDA6NJG2 315 aa20.71■□□□□ 0.91
SEMA3B-209ENST00000456560 C6orf229H3BNL8 230 aa20.71■□□□□ 0.91
SEMA3B-209ENST00000456560 NONOQ15233 471 aaKnown RBP eCLIP20.71■□□□□ 0.91
SEMA3B-209ENST00000456560 ERCC6LQ2NKX8 1250 aa20.71■□□□□ 0.91
SEMA3B-209ENST00000456560 TMC4Q7Z404 712 aa20.71■□□□□ 0.91
SEMA3B-209ENST00000456560 LRRC15Q8TF66 581 aa20.71■□□□□ 0.91
SEMA3B-209ENST00000456560 CCDC51Q96ER9 411 aa20.71■□□□□ 0.91
SEMA3B-209ENST00000456560 GYPCP04921 128 aa20.7■□□□□ 0.9
SEMA3B-209ENST00000456560 GNA11P29992 359 aa20.7■□□□□ 0.9
SEMA3B-209ENST00000456560 TCP11X2Q5H9J9 407 aa20.7■□□□□ 0.9
SEMA3B-209ENST00000456560 RAD9BQ6WBX8 426 aa20.7■□□□□ 0.9
SEMA3B-209ENST00000456560 CPLX3Q8WVH0 158 aa20.7■□□□□ 0.9
SEMA3B-209ENST00000456560 AK8Q96MA6 479 aa20.7■□□□□ 0.9
SEMA3B-209ENST00000456560 WDR24Q96S15 920 aa20.7■□□□□ 0.9
SEMA3B-209ENST00000456560 PIGSQ96S52 555 aa20.7■□□□□ 0.9
SEMA3B-209ENST00000456560 DESI2Q9BSY9 194 aa20.7■□□□□ 0.9
SEMA3B-209ENST00000456560 RIOX1Q9H6W3 641 aa20.7■□□□□ 0.9
SEMA3B-209ENST00000456560 USP17L5A8MUK1 530 aa20.7■□□□□ 0.9
SEMA3B-209ENST00000456560 KCNJ18B7U540 433 aa20.7■□□□□ 0.9
SEMA3B-209ENST00000456560 H7C1D1 291 aa20.7■□□□□ 0.9
SEMA3B-209ENST00000456560 CASP14P31944 242 aa20.7■□□□□ 0.9
SEMA3B-209ENST00000456560 CCT6AP40227 531 aaKnown RBP20.7■□□□□ 0.9
SEMA3B-209ENST00000456560 GTF2IP78347 998 aa20.7■□□□□ 0.9
SEMA3B-209ENST00000456560 KCNJ12Q14500 433 aa20.7■□□□□ 0.9
SEMA3B-209ENST00000456560 ESYT2A0FGR8 921 aa20.69■□□□□ 0.9
SEMA3B-209ENST00000456560 N4BP3O15049 544 aa20.69■□□□□ 0.9
SEMA3B-209ENST00000456560 URI1O94763 535 aaPredicted RBP20.69■□□□□ 0.9
SEMA3B-209ENST00000456560 RHOBTB3O94955 611 aa20.69■□□□□ 0.9
SEMA3B-209ENST00000456560 OR52Z1P0C646 297 aa20.69■□□□□ 0.9
SEMA3B-209ENST00000456560 GNG11P61952 73 aa20.69■□□□□ 0.9
SEMA3B-209ENST00000456560 GABPAQ06546 454 aa20.69■□□□□ 0.9
SEMA3B-209ENST00000456560 IRF2BP1Q8IU81 584 aa20.69■□□□□ 0.9
SEMA3B-209ENST00000456560 CNGA4Q8IV77 575 aa20.69■□□□□ 0.9
SEMA3B-209ENST00000456560 CUEDC2Q9H467 287 aa20.69■□□□□ 0.9
SEMA3B-209ENST00000456560 MRPL44Q9H9J2 332 aaKnown RBP20.69■□□□□ 0.9
SEMA3B-209ENST00000456560 ADGRG1Q9Y653 693 aa20.69■□□□□ 0.9
SEMA3B-209ENST00000456560 CCDC175P0C221 793 aa20.69■□□□□ 0.9
SEMA3B-209ENST00000456560 FXR1P51114 621 aaKnown RBP eCLIP20.69■□□□□ 0.9
SEMA3B-209ENST00000456560 KIFC2Q96AC6 838 aa20.69■□□□□ 0.9
SEMA3B-209ENST00000456560 CAMKK2Q96RR4 588 aa20.69■□□□□ 0.9
SEMA3B-209ENST00000456560 MAGEF1Q9HAY2 307 aa20.69■□□□□ 0.9
SEMA3B-209ENST00000456560 SEC63Q9UGP8 760 aaKnown RBP20.69■□□□□ 0.9
SEMA3B-209ENST00000456560 MAPK8IP1Q9UQF2 711 aa20.69■□□□□ 0.9
SEMA3B-209ENST00000456560 H2AFXP16104 143 aaPredicted RBP20.68■□□□□ 0.9
SEMA3B-209ENST00000456560 CASQ1P31415 396 aa20.68■□□□□ 0.9
SEMA3B-209ENST00000456560 NEK8Q86SG6 692 aa20.68■□□□□ 0.9
SEMA3B-209ENST00000456560 GIMAP8Q8ND71 665 aaPredicted RBP20.68■□□□□ 0.9
SEMA3B-209ENST00000456560 AKT1S1Q96B36 256 aa20.68■□□□□ 0.9
SEMA3B-209ENST00000456560 COA1Q9GZY4 146 aa20.68■□□□□ 0.9
SEMA3B-209ENST00000456560 VPS16Q9H269 839 aa20.68■□□□□ 0.9
SEMA3B-209ENST00000456560 VAT1LQ9HCJ6 419 aa20.68■□□□□ 0.9
SEMA3B-209ENST00000456560 MTMR4Q9NYA4 1195 aa20.68■□□□□ 0.9
SEMA3B-209ENST00000456560 TAB2Q9NYJ8 693 aa20.68■□□□□ 0.9
SEMA3B-209ENST00000456560 SUGT1Q9Y2Z0 365 aa20.68■□□□□ 0.9
SEMA3B-209ENST00000456560 IGKV6D-41A0A0C4DH26 115 aa20.68■□□□□ 0.9
SEMA3B-209ENST00000456560 PPEF1O14829 653 aaPredicted RBP20.68■□□□□ 0.9
SEMA3B-209ENST00000456560 CCNT1O60563 726 aaKnown RBP20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms