RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 EBF2Q9HAK2 575 aa5.09□□□□□ -1.59
DEPDC1-202ENST00000456315 ZSWIM5Q9P217 1185 aa5.09□□□□□ -1.59
DEPDC1-202ENST00000456315 TSPOAP1O95153 1857 aa5.09□□□□□ -1.59
DEPDC1-202ENST00000456315 PSMD14O00487 310 aa5.09□□□□□ -1.59
DEPDC1-202ENST00000456315 ZSCAN12O43309 604 aa5.09□□□□□ -1.59
DEPDC1-202ENST00000456315 MGAT5Q09328 741 aa5.09□□□□□ -1.59
DEPDC1-202ENST00000456315 NEDD9Q14511 834 aa5.09□□□□□ -1.59
DEPDC1-202ENST00000456315 EMC10Q5UCC4 262 aa5.09□□□□□ -1.59
DEPDC1-202ENST00000456315 LMBR1LQ6UX01 489 aa5.09□□□□□ -1.59
DEPDC1-202ENST00000456315 RUFY2Q8WXA3 655 aa5.09□□□□□ -1.59
DEPDC1-202ENST00000456315 INPP4AQ96PE3 977 aaPredicted RBP5.09□□□□□ -1.59
DEPDC1-202ENST00000456315 VCPKMTQ9H867 229 aa5.09□□□□□ -1.59
DEPDC1-202ENST00000456315 ABCF3Q9NUQ8 709 aa5.09□□□□□ -1.59
DEPDC1-202ENST00000456315 DBF4Q9UBU7 674 aaPredicted RBP5.09□□□□□ -1.59
DEPDC1-202ENST00000456315 NRXN3Q9Y4C0 1643 aa5.09□□□□□ -1.59
DEPDC1-202ENST00000456315 CCDC196A0A1B0GTZ2 297 aa5.09□□□□□ -1.59
DEPDC1-202ENST00000456315 CTAGE9A4FU28 777 aa5.09□□□□□ -1.59
DEPDC1-202ENST00000456315 GOLGA8BA8MQT2 603 aa5.09□□□□□ -1.59
DEPDC1-202ENST00000456315 PRC1O43663 620 aa5.09□□□□□ -1.59
DEPDC1-202ENST00000456315 MYL6BP14649 208 aa5.09□□□□□ -1.59
DEPDC1-202ENST00000456315 DNA2P51530 1060 aa5.09□□□□□ -1.59
DEPDC1-202ENST00000456315 GUCY2FP51841 1108 aa5.09□□□□□ -1.59
DEPDC1-202ENST00000456315 FUT2Q10981 343 aa5.09□□□□□ -1.59
DEPDC1-202ENST00000456315 NNTQ13423 1086 aa5.09□□□□□ -1.59
DEPDC1-202ENST00000456315 KSR2Q6VAB6 950 aa5.09□□□□□ -1.59
DEPDC1-202ENST00000456315 SLC51AQ86UW1 340 aa5.09□□□□□ -1.59
DEPDC1-202ENST00000456315 OLIG1Q8TAK6 271 aa5.09□□□□□ -1.59
DEPDC1-202ENST00000456315 SHKBP1Q8TBC3 707 aa5.09□□□□□ -1.59
DEPDC1-202ENST00000456315 JAKMIP2Q96AA8 810 aa5.09□□□□□ -1.59
DEPDC1-202ENST00000456315 CYFIP2Q96F07 1278 aa5.09□□□□□ -1.59
DEPDC1-202ENST00000456315 FAM167BQ9BTA0 163 aa5.09□□□□□ -1.59
DEPDC1-202ENST00000456315 RBM28Q9NW13 759 aaKnown RBP5.09□□□□□ -1.59
DEPDC1-202ENST00000456315 USP6P35125 1406 aa5.09□□□□□ -1.6
DEPDC1-202ENST00000456315 NBPF26B4DH59 902 aa5.09□□□□□ -1.6
DEPDC1-202ENST00000456315 FUT4P22083 530 aa5.09□□□□□ -1.6
DEPDC1-202ENST00000456315 C1QTNF12Q5T7M4 302 aa5.09□□□□□ -1.6
DEPDC1-202ENST00000456315 NBPF14Q5TI25 921 aa5.09□□□□□ -1.6
DEPDC1-202ENST00000456315 CCDC102BQ68D86 513 aa5.09□□□□□ -1.6
DEPDC1-202ENST00000456315 HIBCHQ6NVY1 386 aaPredicted RBP5.09□□□□□ -1.6
DEPDC1-202ENST00000456315 NBPF10Q6P3W6 841 aaKnown RBP5.09□□□□□ -1.6
DEPDC1-202ENST00000456315 NBPF15Q8N660 670 aa5.09□□□□□ -1.6
DEPDC1-202ENST00000456315 NAPGQ99747 312 aaPredicted RBP5.09□□□□□ -1.6
DEPDC1-202ENST00000456315 FAM184BQ9ULE4 1060 aa5.09□□□□□ -1.6
DEPDC1-202ENST00000456315 USP20Q9Y2K6 914 aa5.09□□□□□ -1.6
DEPDC1-202ENST00000456315 SAR1BQ9Y6B6 198 aa5.09□□□□□ -1.6
DEPDC1-202ENST00000456315 RGPD2P0DJD1 1756 aa5.08□□□□□ -1.6
DEPDC1-202ENST00000456315 PLEKHG3A1L390 1219 aa5.08□□□□□ -1.6
DEPDC1-202ENST00000456315 A6NHS1 94 aa5.08□□□□□ -1.6
DEPDC1-202ENST00000456315 SPDYE3A6NKU9 549 aa5.08□□□□□ -1.6
DEPDC1-202ENST00000456315 B4E1Z4 1266 aa5.08□□□□□ -1.6
DEPDC1-202ENST00000456315 HGSO14964 777 aaPredicted RBP5.08□□□□□ -1.6
DEPDC1-202ENST00000456315 PSMA5P28066 241 aa5.08□□□□□ -1.6
DEPDC1-202ENST00000456315 PRCPP42785 496 aa5.08□□□□□ -1.6
DEPDC1-202ENST00000456315 SCTRP47872 440 aa5.08□□□□□ -1.6
DEPDC1-202ENST00000456315 NUTM2AQ8IVF1 878 aaPredicted RBP5.08□□□□□ -1.6
DEPDC1-202ENST00000456315 DIS3L2Q8IYB7 885 aaKnown RBP5.08□□□□□ -1.6
DEPDC1-202ENST00000456315 KIF2BQ8N4N8 673 aa5.08□□□□□ -1.6
DEPDC1-202ENST00000456315 CWC15Q9P013 229 aaKnown RBP5.08□□□□□ -1.6
DEPDC1-202ENST00000456315 PCDHGC5Q9Y5F6 944 aa5.08□□□□□ -1.6
DEPDC1-202ENST00000456315 NUP214P35658 2090 aaPredicted RBP5.08□□□□□ -1.6
DEPDC1-202ENST00000456315 MACROD2A1Z1Q3 448 aa5.08□□□□□ -1.6
DEPDC1-202ENST00000456315 DPPA5A6NC42 116 aa5.08□□□□□ -1.6
DEPDC1-202ENST00000456315 ANP32DO95626 131 aa5.08□□□□□ -1.6
DEPDC1-202ENST00000456315 POLD1P28340 1107 aa5.08□□□□□ -1.6
DEPDC1-202ENST00000456315 HOXC9P31274 260 aa5.08□□□□□ -1.6
DEPDC1-202ENST00000456315 RABL6Q3YEC7 729 aaPredicted RBP5.08□□□□□ -1.6
DEPDC1-202ENST00000456315 TMEM63BQ5T3F8 832 aa5.08□□□□□ -1.6
DEPDC1-202ENST00000456315 LRCH2Q5VUJ6 765 aa5.08□□□□□ -1.6
DEPDC1-202ENST00000456315 KSR1Q8IVT5 923 aa5.08□□□□□ -1.6
DEPDC1-202ENST00000456315 ALG1Q9BT22 464 aa5.08□□□□□ -1.6
DEPDC1-202ENST00000456315 SLC5A4Q9NY91 659 aa5.08□□□□□ -1.6
DEPDC1-202ENST00000456315 RNF14Q9UBS8 474 aa5.08□□□□□ -1.6
DEPDC1-202ENST00000456315 SNX12Q9UMY4 172 aa5.08□□□□□ -1.6
DEPDC1-202ENST00000456315 ZBTB12Q9Y330 459 aaPredicted RBP5.08□□□□□ -1.6
DEPDC1-202ENST00000456315 NRKQ7Z2Y5 1582 aa5.08□□□□□ -1.6
DEPDC1-202ENST00000456315 COL24A1Q17RW2 1714 aa5.08□□□□□ -1.6
DEPDC1-202ENST00000456315 EDIL3O43854 480 aa5.08□□□□□ -1.6
DEPDC1-202ENST00000456315 PRDM1O75626 825 aa5.08□□□□□ -1.6
DEPDC1-202ENST00000456315 FGFR1P11362 822 aa5.08□□□□□ -1.6
DEPDC1-202ENST00000456315 RAB27AP51159 221 aa5.08□□□□□ -1.6
DEPDC1-202ENST00000456315 ELF3P78545 371 aaPredicted RBP5.08□□□□□ -1.6
DEPDC1-202ENST00000456315 ANKRD1Q15327 319 aa5.08□□□□□ -1.6
DEPDC1-202ENST00000456315 CEP85LQ5SZL2 805 aa5.08□□□□□ -1.6
DEPDC1-202ENST00000456315 FAM182AQ5T1J6 154 aa5.08□□□□□ -1.6
DEPDC1-202ENST00000456315 KLHDC7AQ5VTJ3 777 aa5.08□□□□□ -1.6
DEPDC1-202ENST00000456315 MIS18BP1Q6P0N0 1132 aa5.08□□□□□ -1.6
DEPDC1-202ENST00000456315 FBXL16Q8N461 479 aa5.08□□□□□ -1.6
DEPDC1-202ENST00000456315 C3orf20Q8ND61 904 aa5.08□□□□□ -1.6
DEPDC1-202ENST00000456315 XAGE3Q8WTP9 111 aa5.08□□□□□ -1.6
DEPDC1-202ENST00000456315 TCP11Q8WWU5 503 aa5.08□□□□□ -1.6
DEPDC1-202ENST00000456315 NDST4Q9H3R1 872 aa5.08□□□□□ -1.6
DEPDC1-202ENST00000456315 DDX60Q8IY21 1712 aaKnown RBP5.08□□□□□ -1.6
DEPDC1-202ENST00000456315 FAM107AO95990 144 aa5.08□□□□□ -1.6
DEPDC1-202ENST00000456315 HPDP32754 393 aaPredicted RBP5.08□□□□□ -1.6
DEPDC1-202ENST00000456315 COPB2P35606 906 aa5.08□□□□□ -1.6
DEPDC1-202ENST00000456315 SCNN1BP51168 640 aa5.08□□□□□ -1.6
DEPDC1-202ENST00000456315 KCNQ4P56696 695 aa5.08□□□□□ -1.6
DEPDC1-202ENST00000456315 PKN1Q16512 942 aa5.08□□□□□ -1.6
DEPDC1-202ENST00000456315 OTUD6BQ8N6M0 293 aa5.08□□□□□ -1.6
DEPDC1-202ENST00000456315 PACSIN1Q9BY11 444 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms