RNA–Protein interactions for RNA: ENST00000456089.1

TREX1-203, Transcript of three prime repair exonuclease 1, humanhuman

TSL 3 BASIC

Gene TREX1, Length 629 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-203ENST00000456089 AGBL1Q96MI9 1066 aa15.31■□□□□ 0.04
TREX1-203ENST00000456089 OSBPL3Q9H4L5 887 aa15.31■□□□□ 0.04
TREX1-203ENST00000456089 NRBP1Q9UHY1 535 aa15.31■□□□□ 0.04
TREX1-203ENST00000456089 PHF24Q9UPV7 400 aa15.31■□□□□ 0.04
TREX1-203ENST00000456089 SYNRGQ9UMZ2 1314 aa15.31■□□□□ 0.04
TREX1-203ENST00000456089 TSPY2A6NKD2 308 aa15.3■□□□□ 0.04
TREX1-203ENST00000456089 ATP2A1O14983 1001 aa15.3■□□□□ 0.04
TREX1-203ENST00000456089 RANBP6O60518 1105 aaKnown RBP15.3■□□□□ 0.04
TREX1-203ENST00000456089 ADAMTS4O75173 837 aa15.3■□□□□ 0.04
TREX1-203ENST00000456089 ITGB8P26012 769 aa15.3■□□□□ 0.04
TREX1-203ENST00000456089 SLC1A4P43007 532 aa15.3■□□□□ 0.04
TREX1-203ENST00000456089 MFAP1P55081 439 aaKnown RBP15.3■□□□□ 0.04
TREX1-203ENST00000456089 MCMDC2Q4G0Z9 681 aa15.3■□□□□ 0.04
TREX1-203ENST00000456089 C9orf50Q5SZB4 431 aa15.3■□□□□ 0.04
TREX1-203ENST00000456089 CCDC174Q6PII3 467 aa15.3■□□□□ 0.04
TREX1-203ENST00000456089 RNF180Q86T96 592 aa15.3■□□□□ 0.04
TREX1-203ENST00000456089 FAM161BQ96MY7 647 aa15.3■□□□□ 0.04
TREX1-203ENST00000456089 SYNGAP1Q96PV0 1343 aa15.3■□□□□ 0.04
TREX1-203ENST00000456089 ZNF536O15090 1300 aa15.29■□□□□ 0.04
TREX1-203ENST00000456089 HIP1O00291 1037 aa15.29■□□□□ 0.04
TREX1-203ENST00000456089 PQBP1O60828 265 aaKnown RBP15.29■□□□□ 0.04
TREX1-203ENST00000456089 STAT2P52630 851 aa15.29■□□□□ 0.04
TREX1-203ENST00000456089 NMIQ13287 307 aaPredicted RBP15.29■□□□□ 0.04
TREX1-203ENST00000456089 SHHQ15465 462 aa15.29■□□□□ 0.04
TREX1-203ENST00000456089 RRP12Q5JTH9 1297 aaKnown RBP15.29■□□□□ 0.04
TREX1-203ENST00000456089 MAMDC4Q6UXC1 1216 aa15.29■□□□□ 0.04
TREX1-203ENST00000456089 ZNF589Q86UQ0 364 aaPredicted RBP15.29■□□□□ 0.04
TREX1-203ENST00000456089 TOMM22Q9NS69 142 aa15.29■□□□□ 0.04
TREX1-203ENST00000456089 DIAPH3Q9NSV4 1193 aa15.29■□□□□ 0.04
TREX1-203ENST00000456089 MTMR10Q9NXD2 777 aa15.29■□□□□ 0.04
TREX1-203ENST00000456089 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.29■□□□□ 0.04
TREX1-203ENST00000456089 FAM184BQ9ULE4 1060 aa15.29■□□□□ 0.04
TREX1-203ENST00000456089 LAMA4Q16363 1823 aa15.29■□□□□ 0.04
TREX1-203ENST00000456089 ALAS1P13196 640 aa15.28■□□□□ 0.04
TREX1-203ENST00000456089 SDSP20132 328 aa15.28■□□□□ 0.04
TREX1-203ENST00000456089 PTGS1P23219 599 aa15.28■□□□□ 0.04
TREX1-203ENST00000456089 HAND2P61296 217 aa15.28■□□□□ 0.04
TREX1-203ENST00000456089 ACVR2BQ13705 512 aa15.28■□□□□ 0.04
TREX1-203ENST00000456089 KCNA10Q16322 511 aa15.28■□□□□ 0.04
TREX1-203ENST00000456089 ARMCX2Q7L311 632 aa15.28■□□□□ 0.04
TREX1-203ENST00000456089 CCDC144CPQ8IYA2 1237 aa15.28■□□□□ 0.04
TREX1-203ENST00000456089 SLC17A8Q8NDX2 589 aa15.28■□□□□ 0.04
TREX1-203ENST00000456089 CHST13Q8NET6 341 aa15.28■□□□□ 0.04
TREX1-203ENST00000456089 STAG1Q8WVM7 1258 aa15.28■□□□□ 0.04
TREX1-203ENST00000456089 GMCL1Q96IK5 515 aa15.28■□□□□ 0.04
TREX1-203ENST00000456089 RNF146Q9NTX7 359 aa15.28■□□□□ 0.04
TREX1-203ENST00000456089 SYNPO2Q9UMS6 1093 aa15.28■□□□□ 0.04
TREX1-203ENST00000456089 FGAP02671 866 aa15.27■□□□□ 0.04
TREX1-203ENST00000456089 SLC16A2P36021 539 aa15.27■□□□□ 0.04
TREX1-203ENST00000456089 ACLYP53396 1101 aa15.27■□□□□ 0.04
TREX1-203ENST00000456089 OAZ1P54368 228 aa15.27■□□□□ 0.04
TREX1-203ENST00000456089 CCDC96Q2M329 555 aa15.27■□□□□ 0.04
TREX1-203ENST00000456089 CCDC144BQ3MJ40 725 aa15.27■□□□□ 0.04
TREX1-203ENST00000456089 MUM1L1Q5H9M0 696 aa15.27■□□□□ 0.04
TREX1-203ENST00000456089 TTBK2Q6IQ55 1244 aa15.27■□□□□ 0.04
TREX1-203ENST00000456089 GPR153Q6NV75 609 aa15.27■□□□□ 0.04
TREX1-203ENST00000456089 MSL3Q8N5Y2 521 aaKnown RBP15.27■□□□□ 0.04
TREX1-203ENST00000456089 CHURC1Q8WUH1 139 aa15.27■□□□□ 0.04
TREX1-203ENST00000456089 TRERF1Q96PN7 1200 aa15.27■□□□□ 0.04
TREX1-203ENST00000456089 PURBQ96QR8 312 aaKnown RBP15.27■□□□□ 0.04
TREX1-203ENST00000456089 ACAD9Q9H845 621 aa15.27■□□□□ 0.04
TREX1-203ENST00000456089 A1CFQ9NQ94 594 aaKnown RBP15.27■□□□□ 0.04
TREX1-203ENST00000456089 FBXO40Q9UH90 709 aa15.27■□□□□ 0.04
TREX1-203ENST00000456089 ANAPC4Q9UJX5 808 aa15.27■□□□□ 0.04
TREX1-203ENST00000456089 PRR12Q9ULL5 1215 aa15.27■□□□□ 0.04
TREX1-203ENST00000456089 ASTN1O14525 1302 aa15.26■□□□□ 0.03
TREX1-203ENST00000456089 MYH6P13533 1939 aa15.26■□□□□ 0.03
TREX1-203ENST00000456089 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.26■□□□□ 0.03
TREX1-203ENST00000456089 SOWAHBA6NEL2 793 aa15.26■□□□□ 0.03
TREX1-203ENST00000456089 POTEB2H3BUK9 544 aa15.26■□□□□ 0.03
TREX1-203ENST00000456089 CLTBP09497 229 aa15.26■□□□□ 0.03
TREX1-203ENST00000456089 C6orf222P0C671 652 aaPredicted RBP15.26■□□□□ 0.03
TREX1-203ENST00000456089 EPHB4P54760 987 aa15.26■□□□□ 0.03
TREX1-203ENST00000456089 C1orf53Q5VUE5 145 aa15.26■□□□□ 0.03
TREX1-203ENST00000456089 RCSD1Q6JBY9 416 aa15.26■□□□□ 0.03
TREX1-203ENST00000456089 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.26■□□□□ 0.03
TREX1-203ENST00000456089 ZNF467Q7Z7K2 595 aaPredicted RBP15.26■□□□□ 0.03
TREX1-203ENST00000456089 FAM160B2Q86V87 743 aa15.26■□□□□ 0.03
TREX1-203ENST00000456089 KLHDC9Q8NEP7 349 aa15.26■□□□□ 0.03
TREX1-203ENST00000456089 KATNBL1Q9H079 304 aa15.26■□□□□ 0.03
TREX1-203ENST00000456089 STARD7Q9NQZ5 370 aa15.26■□□□□ 0.03
TREX1-203ENST00000456089 FRMPD2Q68DX3 1309 aaPredicted RBP15.25■□□□□ 0.03
TREX1-203ENST00000456089 CCDC171Q6TFL3 1326 aa15.25■□□□□ 0.03
TREX1-203ENST00000456089 ORC4O43929 436 aa15.25■□□□□ 0.03
TREX1-203ENST00000456089 DUSP11O75319 330 aaKnown RBP15.25■□□□□ 0.03
TREX1-203ENST00000456089 HSPD1P10809 573 aaKnown RBP15.25■□□□□ 0.03
TREX1-203ENST00000456089 BEX3Q00994 111 aa15.25■□□□□ 0.03
TREX1-203ENST00000456089 ALX1Q15699 326 aa15.25■□□□□ 0.03
TREX1-203ENST00000456089 CCSAPQ6IQ19 270 aaPredicted RBP15.25■□□□□ 0.03
TREX1-203ENST00000456089 CWC27Q6UX04 472 aaKnown RBP15.25■□□□□ 0.03
TREX1-203ENST00000456089 FAM133AQ8N9E0 248 aa15.25■□□□□ 0.03
TREX1-203ENST00000456089 ABHD16BQ9H3Z7 469 aa15.25■□□□□ 0.03
TREX1-203ENST00000456089 GPCPD1Q9NPB8 672 aa15.25■□□□□ 0.03
TREX1-203ENST00000456089 ASGR1P07306 291 aa15.24■□□□□ 0.03
TREX1-203ENST00000456089 RAG1P15918 1043 aa15.24■□□□□ 0.03
TREX1-203ENST00000456089 FAAP100Q0VG06 881 aa15.24■□□□□ 0.03
TREX1-203ENST00000456089 PPP4R3BQ5MIZ7 849 aa15.24■□□□□ 0.03
TREX1-203ENST00000456089 TMEM63BQ5T3F8 832 aa15.24■□□□□ 0.03
TREX1-203ENST00000456089 NSMFQ6X4W1 530 aa15.24■□□□□ 0.03
TREX1-203ENST00000456089 EEPD1Q7L9B9 569 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms