RNA–Protein interactions for RNA: ENST00000455629.5

CCDC144B-204, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best)

Gene CCDC144B, Length 946 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-204ENST00000455629 FSD1Q9BTV5 496 aa20.93■□□□□ 0.94
CCDC144B-204ENST00000455629 NAPBQ9H115 298 aa20.93■□□□□ 0.94
CCDC144B-204ENST00000455629 TMEM39AQ9NV64 488 aa20.93■□□□□ 0.94
CCDC144B-204ENST00000455629 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.93■□□□□ 0.94
CCDC144B-204ENST00000455629 PPARAQ07869 468 aa20.92■□□□□ 0.94
CCDC144B-204ENST00000455629 KCNA10Q16322 511 aa20.92■□□□□ 0.94
CCDC144B-204ENST00000455629 PCSK9Q8NBP7 692 aaKnown RBP20.92■□□□□ 0.94
CCDC144B-204ENST00000455629 SEC62Q99442 399 aaKnown RBP20.92■□□□□ 0.94
CCDC144B-204ENST00000455629 SEMA6BQ9H3T3 888 aa20.92■□□□□ 0.94
CCDC144B-204ENST00000455629 SPC25Q9HBM1 224 aa20.92■□□□□ 0.94
CCDC144B-204ENST00000455629 MCM3APO60318 1980 aa20.92■□□□□ 0.94
CCDC144B-204ENST00000455629 ELP1O95163 1332 aa20.91■□□□□ 0.94
CCDC144B-204ENST00000455629 STAT2P52630 851 aa20.91■□□□□ 0.94
CCDC144B-204ENST00000455629 TFAP4Q01664 338 aa20.91■□□□□ 0.94
CCDC144B-204ENST00000455629 FPGSQ05932 587 aa20.91■□□□□ 0.94
CCDC144B-204ENST00000455629 FAAP100Q0VG06 881 aa20.91■□□□□ 0.94
CCDC144B-204ENST00000455629 CCDC144BQ3MJ40 725 aa20.91■□□□□ 0.94
CCDC144B-204ENST00000455629 ZMYM1Q5SVZ6 1142 aa20.91■□□□□ 0.94
CCDC144B-204ENST00000455629 MROH7Q68CQ1 1323 aa20.91■□□□□ 0.94
CCDC144B-204ENST00000455629 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.91■□□□□ 0.94
CCDC144B-204ENST00000455629 CHURC1Q8WUH1 139 aa20.91■□□□□ 0.94
CCDC144B-204ENST00000455629 GMCL1Q96IK5 515 aa20.91■□□□□ 0.94
CCDC144B-204ENST00000455629 RNPC3Q96LT9 517 aaKnown RBP20.91■□□□□ 0.94
CCDC144B-204ENST00000455629 FGD4Q96M96 766 aa20.91■□□□□ 0.94
CCDC144B-204ENST00000455629 GLT1D1Q96MS3 346 aa20.91■□□□□ 0.94
CCDC144B-204ENST00000455629 CDX2Q99626 313 aaPredicted RBP20.91■□□□□ 0.94
CCDC144B-204ENST00000455629 TMEM232C9JQI7 657 aa20.9■□□□□ 0.94
CCDC144B-204ENST00000455629 C6orf222P0C671 652 aaPredicted RBP20.9■□□□□ 0.94
CCDC144B-204ENST00000455629 ARMCX2Q7L311 632 aa20.9■□□□□ 0.94
CCDC144B-204ENST00000455629 FAM160B2Q86V87 743 aa20.9■□□□□ 0.94
CCDC144B-204ENST00000455629 UPF3AQ9H1J1 476 aaKnown RBP20.9■□□□□ 0.94
CCDC144B-204ENST00000455629 ACAD9Q9H845 621 aa20.9■□□□□ 0.94
CCDC144B-204ENST00000455629 TMEM265A0A087WTH1 108 aa20.89■□□□□ 0.93
CCDC144B-204ENST00000455629 SLC1A4P43007 532 aa20.89■□□□□ 0.93
CCDC144B-204ENST00000455629 EPHB4P54760 987 aa20.89■□□□□ 0.93
CCDC144B-204ENST00000455629 GJA9P57773 515 aa20.89■□□□□ 0.93
CCDC144B-204ENST00000455629 STAG1Q8WVM7 1258 aa20.89■□□□□ 0.93
CCDC144B-204ENST00000455629 HOMER2Q9NSB8 354 aa20.89■□□□□ 0.93
CCDC144B-204ENST00000455629 ISY1Q9ULR0 285 aaKnown RBP20.89■□□□□ 0.93
CCDC144B-204ENST00000455629 MYADML2A6NDP7 307 aa20.88■□□□□ 0.93
CCDC144B-204ENST00000455629 ADCY6O43306 1168 aa20.88■□□□□ 0.93
CCDC144B-204ENST00000455629 PLA2G6O60733 806 aa20.88■□□□□ 0.93
CCDC144B-204ENST00000455629 TIMP1P01033 207 aa20.88■□□□□ 0.93
CCDC144B-204ENST00000455629 ASGR1P07306 291 aa20.88■□□□□ 0.93
CCDC144B-204ENST00000455629 MX1P20591 662 aa20.88■□□□□ 0.93
CCDC144B-204ENST00000455629 HDAC1Q13547 482 aaPredicted RBP20.88■□□□□ 0.93
CCDC144B-204ENST00000455629 TKFCQ3LXA3 575 aa20.88■□□□□ 0.93
CCDC144B-204ENST00000455629 CCDC144CPQ8IYA2 1237 aa20.88■□□□□ 0.93
CCDC144B-204ENST00000455629 FAM133AQ8N9E0 248 aa20.88■□□□□ 0.93
CCDC144B-204ENST00000455629 OTUD7AQ8TE49 926 aaPredicted RBP20.88■□□□□ 0.93
CCDC144B-204ENST00000455629 TTYH1Q9H313 450 aaPredicted RBP20.88■□□□□ 0.93
CCDC144B-204ENST00000455629 TBX21Q9UL17 535 aa20.88■□□□□ 0.93
CCDC144B-204ENST00000455629 CDK7P50613 346 aa20.87■□□□□ 0.93
CCDC144B-204ENST00000455629 NKX3-2P78367 333 aa20.87■□□□□ 0.93
CCDC144B-204ENST00000455629 IKQ13123 557 aaPredicted RBP20.87■□□□□ 0.93
CCDC144B-204ENST00000455629 GNASQ5JWF2 1037 aa20.87■□□□□ 0.93
CCDC144B-204ENST00000455629 ERICH6BQ5W0A0 696 aa20.87■□□□□ 0.93
CCDC144B-204ENST00000455629 KATNBL1Q9H079 304 aa20.87■□□□□ 0.93
CCDC144B-204ENST00000455629 RNF146Q9NTX7 359 aa20.87■□□□□ 0.93
CCDC144B-204ENST00000455629 STX8Q9UNK0 236 aa20.87■□□□□ 0.93
CCDC144B-204ENST00000455629 ZNF536O15090 1300 aa20.86■□□□□ 0.93
CCDC144B-204ENST00000455629 A0A0U1RQG5 324 aaPredicted RBP20.86■□□□□ 0.93
CCDC144B-204ENST00000455629 MCCP23508 829 aa20.86■□□□□ 0.93
CCDC144B-204ENST00000455629 CNTN2Q02246 1040 aa20.86■□□□□ 0.93
CCDC144B-204ENST00000455629 VTI1AQ96AJ9 217 aa20.86■□□□□ 0.93
CCDC144B-204ENST00000455629 A1CFQ9NQ94 594 aaKnown RBP20.86■□□□□ 0.93
CCDC144B-204ENST00000455629 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.86■□□□□ 0.93
CCDC144B-204ENST00000455629 EYSQ5T1H1 3165 aa20.86■□□□□ 0.93
CCDC144B-204ENST00000455629 ASB14A6NK59 587 aa20.85■□□□□ 0.93
CCDC144B-204ENST00000455629 TSPY2A6NKD2 308 aa20.85■□□□□ 0.93
CCDC144B-204ENST00000455629 ARVCFO00192 962 aa20.85■□□□□ 0.93
CCDC144B-204ENST00000455629 RCSD1Q6JBY9 416 aa20.85■□□□□ 0.93
CCDC144B-204ENST00000455629 MFSD5Q6N075 450 aa20.85■□□□□ 0.93
CCDC144B-204ENST00000455629 CCDC174Q6PII3 467 aa20.85■□□□□ 0.93
CCDC144B-204ENST00000455629 MAFAQ8NHW3 353 aaPredicted RBP20.85■□□□□ 0.93
CCDC144B-204ENST00000455629 AGBL1Q96MI9 1066 aa20.85■□□□□ 0.93
CCDC144B-204ENST00000455629 RWDD1Q9H446 243 aaPredicted RBP20.85■□□□□ 0.93
CCDC144B-204ENST00000455629 CDH23Q9H251 3354 aa20.85■□□□□ 0.93
CCDC144B-204ENST00000455629 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.84■□□□□ 0.93
CCDC144B-204ENST00000455629 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.84■□□□□ 0.93
CCDC144B-204ENST00000455629 FOXP2O15409 715 aa20.84■□□□□ 0.93
CCDC144B-204ENST00000455629 IGHDP01880 384 aa20.84■□□□□ 0.93
CCDC144B-204ENST00000455629 IRX5P78411 483 aaPredicted RBP20.84■□□□□ 0.93
CCDC144B-204ENST00000455629 TNFAIP2Q03169 654 aa20.84■□□□□ 0.93
CCDC144B-204ENST00000455629 TRERF1Q96PN7 1200 aa20.84■□□□□ 0.93
CCDC144B-204ENST00000455629 COL25A1Q9BXS0 654 aaPredicted RBP20.84■□□□□ 0.93
CCDC144B-204ENST00000455629 IL17RBQ9NRM6 502 aa20.84■□□□□ 0.93
CCDC144B-204ENST00000455629 ZBTB47Q9UFB7 747 aaPredicted RBP20.84■□□□□ 0.93
CCDC144B-204ENST00000455629 ANAPC4Q9UJX5 808 aa20.84■□□□□ 0.93
CCDC144B-204ENST00000455629 SALL3Q9BXA9 1300 aa20.83■□□□□ 0.93
CCDC144B-204ENST00000455629 SOWAHBA6NEL2 793 aa20.83■□□□□ 0.93
CCDC144B-204ENST00000455629 CTAGE5O15320 804 aa20.83■□□□□ 0.93
CCDC144B-204ENST00000455629 ALAS1P13196 640 aa20.83■□□□□ 0.93
CCDC144B-204ENST00000455629 CTDSPL2Q05D32 466 aa20.83■□□□□ 0.93
CCDC144B-204ENST00000455629 PPIGQ13427 754 aaKnown RBP eCLIP20.83■□□□□ 0.93
CCDC144B-204ENST00000455629 KCTD1Q719H9 257 aa20.83■□□□□ 0.93
CCDC144B-204ENST00000455629 MYLIPQ8WY64 445 aa20.83■□□□□ 0.93
CCDC144B-204ENST00000455629 PRR12Q9ULL5 1215 aa20.83■□□□□ 0.93
CCDC144B-204ENST00000455629 TLR3O15455 904 aaKnown RBP20.82■□□□□ 0.92
CCDC144B-204ENST00000455629 RANBP6O60518 1105 aaKnown RBP20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms