RNA–Protein interactions for RNA: ENST00000455554.2

LINC02540-201, Transcript of long intergenic non-protein coding RNA 2540, humanhuman

TSL 3 BASIC

Gene LINC02540, Length 570 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02540-201ENST00000455554 GOLM1Q8NBJ4 401 aa4.32□□□□□ -1.72
LINC02540-201ENST00000455554 FBXO27Q8NI29 283 aa4.32□□□□□ -1.72
LINC02540-201ENST00000455554 FNIP1Q8TF40 1166 aa4.32□□□□□ -1.72
LINC02540-201ENST00000455554 JMJD8Q96S16 334 aa4.32□□□□□ -1.72
LINC02540-201ENST00000455554 SPATA25Q9BR10 227 aa4.32□□□□□ -1.72
LINC02540-201ENST00000455554 GMIPQ9P107 970 aa4.32□□□□□ -1.72
LINC02540-201ENST00000455554 DUSP10Q9Y6W6 482 aa4.32□□□□□ -1.72
LINC02540-201ENST00000455554 MEIS1O00470 390 aa4.31□□□□□ -1.72
LINC02540-201ENST00000455554 CLEC3AO75596 197 aa4.31□□□□□ -1.72
LINC02540-201ENST00000455554 CTSHP09668 335 aa4.31□□□□□ -1.72
LINC02540-201ENST00000455554 POLR2BP30876 1174 aaKnown RBP4.31□□□□□ -1.72
LINC02540-201ENST00000455554 ZXDAP98168 799 aa4.31□□□□□ -1.72
LINC02540-201ENST00000455554 KRTAP1-1Q07627 177 aa4.31□□□□□ -1.72
LINC02540-201ENST00000455554 PSMD2Q13200 908 aa4.31□□□□□ -1.72
LINC02540-201ENST00000455554 PWP1Q13610 501 aa4.31□□□□□ -1.72
LINC02540-201ENST00000455554 AEBP1Q8IUX7 1158 aa4.31□□□□□ -1.72
LINC02540-201ENST00000455554 ZNF512BQ96KM6 892 aaPredicted RBP4.31□□□□□ -1.72
LINC02540-201ENST00000455554 AP5S1Q9NUS5 200 aa4.31□□□□□ -1.72
LINC02540-201ENST00000455554 PARP2Q9UGN5 583 aa4.31□□□□□ -1.72
LINC02540-201ENST00000455554 PMF1-BGLAPU3KQ54 211 aa4.31□□□□□ -1.72
LINC02540-201ENST00000455554 A0A1W2PQ27 194 aa4.3□□□□□ -1.72
LINC02540-201ENST00000455554 A0A1W2PQ64 194 aa4.3□□□□□ -1.72
LINC02540-201ENST00000455554 A0A1W2PQC6 194 aa4.3□□□□□ -1.72
LINC02540-201ENST00000455554 A0A1W2PQD8 194 aa4.3□□□□□ -1.72
LINC02540-201ENST00000455554 SUPT5HO00267 1087 aaKnown RBP4.3□□□□□ -1.72
LINC02540-201ENST00000455554 VAV1P15498 845 aa4.3□□□□□ -1.72
LINC02540-201ENST00000455554 FBLN1P23142 703 aa4.3□□□□□ -1.72
LINC02540-201ENST00000455554 CTSKP43235 329 aa4.3□□□□□ -1.72
LINC02540-201ENST00000455554 ADAM17P78536 824 aa4.3□□□□□ -1.72
LINC02540-201ENST00000455554 DAB2P98082 770 aa4.3□□□□□ -1.72
LINC02540-201ENST00000455554 FOXO4P98177 505 aa4.3□□□□□ -1.72
LINC02540-201ENST00000455554 MVKQ03426 396 aa4.3□□□□□ -1.72
LINC02540-201ENST00000455554 CWF19L2Q2TBE0 894 aaKnown RBP4.3□□□□□ -1.72
LINC02540-201ENST00000455554 OVOS1Q6IE37 1185 aa4.3□□□□□ -1.72
LINC02540-201ENST00000455554 PAQR3Q6TCH7 311 aa4.3□□□□□ -1.72
LINC02540-201ENST00000455554 FAM196AQ6ZSG2 479 aa4.3□□□□□ -1.72
LINC02540-201ENST00000455554 SAPCD2Q86UD0 394 aa4.3□□□□□ -1.72
LINC02540-201ENST00000455554 TMEM52Q8NDY8 209 aa4.3□□□□□ -1.72
LINC02540-201ENST00000455554 CRELD1Q96HD1 420 aa4.3□□□□□ -1.72
LINC02540-201ENST00000455554 RSRP1Q9BUV0 290 aa4.3□□□□□ -1.72
LINC02540-201ENST00000455554 KRTAP3-1Q9BYR8 98 aa4.3□□□□□ -1.72
LINC02540-201ENST00000455554 GFOD1Q9NXC2 390 aa4.3□□□□□ -1.72
LINC02540-201ENST00000455554 SMPD4Q9NXE4 827 aa4.3□□□□□ -1.72
LINC02540-201ENST00000455554 SH3D21A4FU49 640 aa4.29□□□□□ -1.72
LINC02540-201ENST00000455554 MATN3O15232 486 aa4.29□□□□□ -1.72
LINC02540-201ENST00000455554 TLR3O15455 904 aaKnown RBP4.29□□□□□ -1.72
LINC02540-201ENST00000455554 SRGAP3O43295 1099 aa4.29□□□□□ -1.72
LINC02540-201ENST00000455554 CYBBP04839 570 aa4.29□□□□□ -1.72
LINC02540-201ENST00000455554 ITGB3P05106 788 aa4.29□□□□□ -1.72
LINC02540-201ENST00000455554 ATF2P15336 505 aa4.29□□□□□ -1.72
LINC02540-201ENST00000455554 CNR2P34972 360 aa4.29□□□□□ -1.72
LINC02540-201ENST00000455554 CCNFP41002 786 aa4.29□□□□□ -1.72
LINC02540-201ENST00000455554 HTRA3P83110 453 aa4.29□□□□□ -1.72
LINC02540-201ENST00000455554 DLX2Q07687 328 aaPredicted RBP4.29□□□□□ -1.72
LINC02540-201ENST00000455554 KCNA1Q09470 495 aa4.29□□□□□ -1.72
LINC02540-201ENST00000455554 CDCP2Q5VXM1 449 aa4.29□□□□□ -1.72
LINC02540-201ENST00000455554 CRTC3Q6UUV7 619 aa4.29□□□□□ -1.72
LINC02540-201ENST00000455554 ZNF526Q8TF50 670 aaPredicted RBP4.29□□□□□ -1.72
LINC02540-201ENST00000455554 MKRN2Q9H000 416 aaKnown RBP4.29□□□□□ -1.72
LINC02540-201ENST00000455554 RNF38Q9H0F5 515 aa4.29□□□□□ -1.72
LINC02540-201ENST00000455554 CNNM2Q9H8M5 875 aa4.29□□□□□ -1.72
LINC02540-201ENST00000455554 SRRDQ9UH36 339 aa4.29□□□□□ -1.72
LINC02540-201ENST00000455554 FBXL21Q9UKT6 434 aa4.29□□□□□ -1.72
LINC02540-201ENST00000455554 FAN1Q9Y2M0 1017 aa4.29□□□□□ -1.72
LINC02540-201ENST00000455554 PCDHB14Q9Y5E9 798 aa4.29□□□□□ -1.72
LINC02540-201ENST00000455554 PCDHB12Q9Y5F1 795 aa4.29□□□□□ -1.72
LINC02540-201ENST00000455554 MINDY4BA8MYZ0 360 aa4.28□□□□□ -1.72
LINC02540-201ENST00000455554 NOBOXO60393 691 aa4.28□□□□□ -1.72
LINC02540-201ENST00000455554 ATE1O95260 518 aa4.28□□□□□ -1.72
LINC02540-201ENST00000455554 DBHP09172 617 aa4.28□□□□□ -1.72
LINC02540-201ENST00000455554 GARTP22102 1010 aa4.28□□□□□ -1.72
LINC02540-201ENST00000455554 GJA9P57773 515 aa4.28□□□□□ -1.72
LINC02540-201ENST00000455554 RTP2Q5QGT7 225 aa4.28□□□□□ -1.72
LINC02540-201ENST00000455554 HLA-DQA1Q5Y7H0 255 aa4.28□□□□□ -1.72
LINC02540-201ENST00000455554 BICRALQ6AI39 1079 aa4.28□□□□□ -1.72
LINC02540-201ENST00000455554 JAMLQ86YT9 394 aa4.28□□□□□ -1.72
LINC02540-201ENST00000455554 NAT16Q8N8M0 369 aa4.28□□□□□ -1.72
LINC02540-201ENST00000455554 DDX1Q92499 740 aaKnown RBP4.28□□□□□ -1.72
LINC02540-201ENST00000455554 LNPKQ9C0E8 428 aa4.28□□□□□ -1.72
LINC02540-201ENST00000455554 BRMS1Q9HCU9 246 aa4.28□□□□□ -1.72
LINC02540-201ENST00000455554 PRR13Q9NZ81 148 aa4.28□□□□□ -1.72
LINC02540-201ENST00000455554 A0A1W2PQJ5 194 aa4.27□□□□□ -1.73
LINC02540-201ENST00000455554 ANKRD33BA6NCL7 494 aa4.27□□□□□ -1.73
LINC02540-201ENST00000455554 GSNP06396 782 aa4.27□□□□□ -1.73
LINC02540-201ENST00000455554 MC3RP41968 323 aa4.27□□□□□ -1.73
LINC02540-201ENST00000455554 XPCQ01831 940 aaPredicted RBP4.27□□□□□ -1.73
LINC02540-201ENST00000455554 NLRC3Q7RTR2 1065 aa4.27□□□□□ -1.73
LINC02540-201ENST00000455554 TMC4Q7Z404 712 aa4.27□□□□□ -1.73
LINC02540-201ENST00000455554 TMEM192Q8IY95 271 aa4.27□□□□□ -1.73
LINC02540-201ENST00000455554 CARFQ8N187 725 aa4.27□□□□□ -1.73
LINC02540-201ENST00000455554 SLC16A11Q8NCK7 471 aa4.27□□□□□ -1.73
LINC02540-201ENST00000455554 ATG4CQ96DT6 458 aa4.27□□□□□ -1.73
LINC02540-201ENST00000455554 LRRC3Q9BY71 257 aa4.27□□□□□ -1.73
LINC02540-201ENST00000455554 SCAND2PQ9GZW5 306 aaPredicted RBP4.27□□□□□ -1.73
LINC02540-201ENST00000455554 ANTXR1Q9H6X2 564 aa4.27□□□□□ -1.73
LINC02540-201ENST00000455554 ROBO2Q9HCK4 1378 aa4.27□□□□□ -1.73
LINC02540-201ENST00000455554 C1QTNF3-AMACRE9PGA6 284 aa4.26□□□□□ -1.73
LINC02540-201ENST00000455554 F8W031 263 aaPredicted RBP4.26□□□□□ -1.73
LINC02540-201ENST00000455554 FSHBP01225 129 aa4.26□□□□□ -1.73
LINC02540-201ENST00000455554 GSTM1P09488 218 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms