RNA–Protein interactions for RNA: ENST00000455111.1

GPC1-206, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-206ENST00000455111 PRDM5Q9NQX1 630 aaPredicted RBP19.07■□□□□ 0.64
GPC1-206ENST00000455111 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.07■□□□□ 0.64
GPC1-206ENST00000455111 LAMA4Q16363 1823 aa19.07■□□□□ 0.64
GPC1-206ENST00000455111 OAZ1P54368 228 aa19.06■□□□□ 0.64
GPC1-206ENST00000455111 TMEM63BQ5T3F8 832 aa19.06■□□□□ 0.64
GPC1-206ENST00000455111 MSL3Q8N5Y2 521 aaKnown RBP19.06■□□□□ 0.64
GPC1-206ENST00000455111 EVI5LQ96CN4 794 aa19.06■□□□□ 0.64
GPC1-206ENST00000455111 DDX11Q96FC9 970 aa19.06■□□□□ 0.64
GPC1-206ENST00000455111 PURBQ96QR8 312 aaKnown RBP19.06■□□□□ 0.64
GPC1-206ENST00000455111 A1CFQ9NQ94 594 aaKnown RBP19.06■□□□□ 0.64
GPC1-206ENST00000455111 HOMER2Q9NSB8 354 aa19.06■□□□□ 0.64
GPC1-206ENST00000455111 ZHX1Q9UKY1 873 aaPredicted RBP19.06■□□□□ 0.64
GPC1-206ENST00000455111 CDH23Q9H251 3354 aa19.06■□□□□ 0.64
GPC1-206ENST00000455111 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.05■□□□□ 0.64
GPC1-206ENST00000455111 ACLYP53396 1101 aa19.05■□□□□ 0.64
GPC1-206ENST00000455111 ACVR2BQ13705 512 aa19.05■□□□□ 0.64
GPC1-206ENST00000455111 ALX1Q15699 326 aa19.05■□□□□ 0.64
GPC1-206ENST00000455111 LRRFIP1Q32MZ4 808 aaKnown RBP19.05■□□□□ 0.64
GPC1-206ENST00000455111 MUM1L1Q5H9M0 696 aa19.05■□□□□ 0.64
GPC1-206ENST00000455111 TTBK2Q6IQ55 1244 aa19.05■□□□□ 0.64
GPC1-206ENST00000455111 ARMCX2Q7L311 632 aa19.05■□□□□ 0.64
GPC1-206ENST00000455111 CHST13Q8NET6 341 aa19.05■□□□□ 0.64
GPC1-206ENST00000455111 STAG1Q8WVM7 1258 aa19.05■□□□□ 0.64
GPC1-206ENST00000455111 ZNF287Q9HBT7 754 aa19.05■□□□□ 0.64
GPC1-206ENST00000455111 PRR12Q9ULL5 1215 aa19.05■□□□□ 0.64
GPC1-206ENST00000455111 ORC4O43929 436 aa19.04■□□□□ 0.64
GPC1-206ENST00000455111 IGHDP01880 384 aa19.04■□□□□ 0.64
GPC1-206ENST00000455111 FGAP02671 866 aa19.04■□□□□ 0.64
GPC1-206ENST00000455111 FAAP100Q0VG06 881 aa19.04■□□□□ 0.64
GPC1-206ENST00000455111 NMIQ13287 307 aaPredicted RBP19.04■□□□□ 0.64
GPC1-206ENST00000455111 KCNA10Q16322 511 aa19.04■□□□□ 0.64
GPC1-206ENST00000455111 RNF180Q86T96 592 aa19.04■□□□□ 0.64
GPC1-206ENST00000455111 CCDC144CPQ8IYA2 1237 aa19.04■□□□□ 0.64
GPC1-206ENST00000455111 ANKRD35Q8N283 1001 aa19.04■□□□□ 0.64
GPC1-206ENST00000455111 LBHD1Q9BQE6 289 aaPredicted RBP19.04■□□□□ 0.64
GPC1-206ENST00000455111 UPF3AQ9H1J1 476 aaKnown RBP19.04■□□□□ 0.64
GPC1-206ENST00000455111 HELLSQ9NRZ9 838 aa19.04■□□□□ 0.64
GPC1-206ENST00000455111 STX8Q9UNK0 236 aa19.04■□□□□ 0.64
GPC1-206ENST00000455111 CNPY2Q9Y2B0 182 aa19.04■□□□□ 0.64
GPC1-206ENST00000455111 TSPY2A6NKD2 308 aa19.03■□□□□ 0.64
GPC1-206ENST00000455111 KIAA0355O15063 1070 aa19.03■□□□□ 0.64
GPC1-206ENST00000455111 PLA2G6O60733 806 aa19.03■□□□□ 0.64
GPC1-206ENST00000455111 DUSP11O75319 330 aaKnown RBP19.03■□□□□ 0.64
GPC1-206ENST00000455111 HSPD1P10809 573 aaKnown RBP19.03■□□□□ 0.64
GPC1-206ENST00000455111 SLC1A4P43007 532 aa19.03■□□□□ 0.64
GPC1-206ENST00000455111 STAT2P52630 851 aa19.03■□□□□ 0.64
GPC1-206ENST00000455111 CCDC144BQ3MJ40 725 aa19.03■□□□□ 0.64
GPC1-206ENST00000455111 RCSD1Q6JBY9 416 aa19.03■□□□□ 0.64
GPC1-206ENST00000455111 SMC5Q8IY18 1101 aa19.03■□□□□ 0.64
GPC1-206ENST00000455111 TSEN34Q9BSV6 310 aaKnown RBP19.03■□□□□ 0.64
GPC1-206ENST00000455111 LNPKQ9C0E8 428 aa19.03■□□□□ 0.64
GPC1-206ENST00000455111 RNF146Q9NTX7 359 aa19.03■□□□□ 0.64
GPC1-206ENST00000455111 FAM184BQ9ULE4 1060 aa19.03■□□□□ 0.64
GPC1-206ENST00000455111 STXBP5LQ9Y2K9 1186 aa19.03■□□□□ 0.64
GPC1-206ENST00000455111 UNC80Q8N2C7 3258 aa19.03■□□□□ 0.64
GPC1-206ENST00000455111 PQBP1O60828 265 aaKnown RBP19.02■□□□□ 0.64
GPC1-206ENST00000455111 CLTBP09497 229 aa19.02■□□□□ 0.64
GPC1-206ENST00000455111 CST5P28325 142 aaPredicted RBP19.02■□□□□ 0.64
GPC1-206ENST00000455111 CCDC174Q6PII3 467 aa19.02■□□□□ 0.64
GPC1-206ENST00000455111 ANKRD33Q7Z3H0 272 aa19.02■□□□□ 0.64
GPC1-206ENST00000455111 ACAD9Q9H845 621 aa19.02■□□□□ 0.64
GPC1-206ENST00000455111 RANBP6O60518 1105 aaKnown RBP19.01■□□□□ 0.63
GPC1-206ENST00000455111 SLC3A2P08195 630 aaKnown RBP19.01■□□□□ 0.63
GPC1-206ENST00000455111 CDK7P50613 346 aa19.01■□□□□ 0.63
GPC1-206ENST00000455111 GJA9P57773 515 aa19.01■□□□□ 0.63
GPC1-206ENST00000455111 NKX3-2P78367 333 aa19.01■□□□□ 0.63
GPC1-206ENST00000455111 MCMDC2Q4G0Z9 681 aa19.01■□□□□ 0.63
GPC1-206ENST00000455111 FAM109BQ6ICB4 259 aaPredicted RBP19.01■□□□□ 0.63
GPC1-206ENST00000455111 FAM160B2Q86V87 743 aa19.01■□□□□ 0.63
GPC1-206ENST00000455111 TBC1D10CQ8IV04 446 aa19.01■□□□□ 0.63
GPC1-206ENST00000455111 FAM161BQ96MY7 647 aa19.01■□□□□ 0.63
GPC1-206ENST00000455111 TRERF1Q96PN7 1200 aa19.01■□□□□ 0.63
GPC1-206ENST00000455111 TMEM47Q9BQJ4 181 aa19.01■□□□□ 0.63
GPC1-206ENST00000455111 ABHD16BQ9H3Z7 469 aa19.01■□□□□ 0.63
GPC1-206ENST00000455111 PRKAG2Q9UGJ0 569 aa19.01■□□□□ 0.63
GPC1-206ENST00000455111 FBXO40Q9UH90 709 aa19.01■□□□□ 0.63
GPC1-206ENST00000455111 MTMR7Q9Y216 660 aa19.01■□□□□ 0.63
GPC1-206ENST00000455111 ASGR1P07306 291 aa19■□□□□ 0.63
GPC1-206ENST00000455111 ALAS1P13196 640 aa19■□□□□ 0.63
GPC1-206ENST00000455111 SLC16A2P36021 539 aa19■□□□□ 0.63
GPC1-206ENST00000455111 HAND2P61296 217 aa19■□□□□ 0.63
GPC1-206ENST00000455111 PLEKHM2Q8IWE5 1019 aa19■□□□□ 0.63
GPC1-206ENST00000455111 SLC17A8Q8NDX2 589 aa19■□□□□ 0.63
GPC1-206ENST00000455111 CHURC1Q8WUH1 139 aa19■□□□□ 0.63
GPC1-206ENST00000455111 RANBP17Q9H2T7 1088 aaKnown RBP19■□□□□ 0.63
GPC1-206ENST00000455111 TTYH1Q9H313 450 aaPredicted RBP19■□□□□ 0.63
GPC1-206ENST00000455111 STARD7Q9NQZ5 370 aa19■□□□□ 0.63
GPC1-206ENST00000455111 PDGFCQ9NRA1 345 aa19■□□□□ 0.63
GPC1-206ENST00000455111 CYP39A1Q9NYL5 469 aa19■□□□□ 0.63
GPC1-206ENST00000455111 TBX21Q9UL17 535 aa19■□□□□ 0.63
GPC1-206ENST00000455111 GNEQ9Y223 722 aaKnown RBP19■□□□□ 0.63
GPC1-206ENST00000455111 ZMYM6O95789 1325 aa19■□□□□ 0.63
GPC1-206ENST00000455111 FDX1P10109 184 aa18.99■□□□□ 0.63
GPC1-206ENST00000455111 BEX3Q00994 111 aa18.99■□□□□ 0.63
GPC1-206ENST00000455111 B4GALNT3Q6L9W6 998 aa18.99■□□□□ 0.63
GPC1-206ENST00000455111 TAPT1Q6NXT6 567 aa18.99■□□□□ 0.63
GPC1-206ENST00000455111 BTNL9Q6UXG8 535 aa18.99■□□□□ 0.63
GPC1-206ENST00000455111 TOX2Q96NM4 488 aa18.99■□□□□ 0.63
GPC1-206ENST00000455111 NEDD4P46934 1319 aa18.99■□□□□ 0.63
GPC1-206ENST00000455111 FRMPD2Q68DX3 1309 aaPredicted RBP18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms