RNA–Protein interactions for RNA: ENST00000453796.1

HSPG2-207, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 621 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-207ENST00000453796 MSCO60682 206 aa17.12■□□□□ 0.33
HSPG2-207ENST00000453796 COL6A1P12109 1028 aa17.12■□□□□ 0.33
HSPG2-207ENST00000453796 SLC16A2P36021 539 aa17.12■□□□□ 0.33
HSPG2-207ENST00000453796 SLC4A3P48751 1232 aa17.12■□□□□ 0.33
HSPG2-207ENST00000453796 SNAP25P60880 206 aa17.12■□□□□ 0.33
HSPG2-207ENST00000453796 TKFCQ3LXA3 575 aa17.12■□□□□ 0.33
HSPG2-207ENST00000453796 ENAHQ8N8S7 591 aaPredicted RBP17.12■□□□□ 0.33
HSPG2-207ENST00000453796 MAP4K1Q92918 833 aa17.12■□□□□ 0.33
HSPG2-207ENST00000453796 ZSCAN10Q96SZ4 725 aaPredicted RBP17.12■□□□□ 0.33
HSPG2-207ENST00000453796 NRBP1Q9UHY1 535 aa17.12■□□□□ 0.33
HSPG2-207ENST00000453796 TAF6LQ9Y6J9 622 aa17.12■□□□□ 0.33
HSPG2-207ENST00000453796 U3KPZ7 1027 aaPredicted RBP17.12■□□□□ 0.33
HSPG2-207ENST00000453796 PFASO15067 1338 aa17.12■□□□□ 0.33
HSPG2-207ENST00000453796 LRRC37A2A6NM11 1700 aa17.11■□□□□ 0.33
HSPG2-207ENST00000453796 SEPT4O43236 478 aa17.11■□□□□ 0.33
HSPG2-207ENST00000453796 CNGA1P29973 690 aa17.11■□□□□ 0.33
HSPG2-207ENST00000453796 BMP2KLQ5H9B9 411 aa17.11■□□□□ 0.33
HSPG2-207ENST00000453796 SYDE2Q5VT97 1194 aa17.11■□□□□ 0.33
HSPG2-207ENST00000453796 MAMDC4Q6UXC1 1216 aa17.11■□□□□ 0.33
HSPG2-207ENST00000453796 CYB5R4Q7L1T6 521 aa17.11■□□□□ 0.33
HSPG2-207ENST00000453796 ZNF467Q7Z7K2 595 aaPredicted RBP17.11■□□□□ 0.33
HSPG2-207ENST00000453796 MSL3Q8N5Y2 521 aaKnown RBP17.11■□□□□ 0.33
HSPG2-207ENST00000453796 PNMA1Q8ND90 353 aa17.11■□□□□ 0.33
HSPG2-207ENST00000453796 DDX11Q96FC9 970 aa17.11■□□□□ 0.33
HSPG2-207ENST00000453796 ACAD9Q9H845 621 aa17.11■□□□□ 0.33
HSPG2-207ENST00000453796 GPCPD1Q9NPB8 672 aa17.11■□□□□ 0.33
HSPG2-207ENST00000453796 HOMER2Q9NSB8 354 aa17.11■□□□□ 0.33
HSPG2-207ENST00000453796 RNF146Q9NTX7 359 aa17.11■□□□□ 0.33
HSPG2-207ENST00000453796 TNKSO95271 1327 aa17.11■□□□□ 0.33
HSPG2-207ENST00000453796 CEP290O15078 2479 aa17.11■□□□□ 0.33
HSPG2-207ENST00000453796 ICAM1P05362 532 aa17.1■□□□□ 0.33
HSPG2-207ENST00000453796 SEC23AQ15436 765 aa17.1■□□□□ 0.33
HSPG2-207ENST00000453796 MUM1L1Q5H9M0 696 aa17.1■□□□□ 0.33
HSPG2-207ENST00000453796 CCDC174Q6PII3 467 aa17.1■□□□□ 0.33
HSPG2-207ENST00000453796 ANKRD35Q8N283 1001 aa17.1■□□□□ 0.33
HSPG2-207ENST00000453796 DPF3Q92784 378 aa17.1■□□□□ 0.33
HSPG2-207ENST00000453796 TRERF1Q96PN7 1200 aa17.1■□□□□ 0.33
HSPG2-207ENST00000453796 C11orf49Q9H6J7 331 aa17.1■□□□□ 0.33
HSPG2-207ENST00000453796 A1CFQ9NQ94 594 aaKnown RBP17.1■□□□□ 0.33
HSPG2-207ENST00000453796 SYNGAP1Q96PV0 1343 aa17.1■□□□□ 0.33
HSPG2-207ENST00000453796 DNAH12Q6ZR08 3092 aa17.1■□□□□ 0.33
HSPG2-207ENST00000453796 H0YGN5 161 aa17.09■□□□□ 0.33
HSPG2-207ENST00000453796 SNAI1O95863 264 aaPredicted RBP17.09■□□□□ 0.33
HSPG2-207ENST00000453796 ZNF865P0CJ78 1059 aaPredicted RBP17.09■□□□□ 0.33
HSPG2-207ENST00000453796 ALAS1P13196 640 aa17.09■□□□□ 0.33
HSPG2-207ENST00000453796 TAL1P17542 331 aaPredicted RBP17.09■□□□□ 0.33
HSPG2-207ENST00000453796 GPATCH4Q5T3I0 446 aaKnown RBP17.09■□□□□ 0.33
HSPG2-207ENST00000453796 STOX1Q6ZVD7 989 aa17.09■□□□□ 0.33
HSPG2-207ENST00000453796 FAM133AQ8N9E0 248 aa17.09■□□□□ 0.33
HSPG2-207ENST00000453796 ESYT1Q9BSJ8 1104 aa17.09■□□□□ 0.33
HSPG2-207ENST00000453796 LSG1Q9H089 658 aaKnown RBP17.09■□□□□ 0.33
HSPG2-207ENST00000453796 RBM8AQ9Y5S9 174 aaKnown RBP17.09■□□□□ 0.33
HSPG2-207ENST00000453796 E7EWF7 191 aa17.08■□□□□ 0.32
HSPG2-207ENST00000453796 CNTN2Q02246 1040 aa17.08■□□□□ 0.32
HSPG2-207ENST00000453796 ANO1Q5XXA6 986 aa17.08■□□□□ 0.32
HSPG2-207ENST00000453796 KAT14Q9H8E8 782 aa17.08■□□□□ 0.32
HSPG2-207ENST00000453796 CCPG1Q9ULG6 757 aa17.08■□□□□ 0.32
HSPG2-207ENST00000453796 ASTN1O14525 1302 aa17.07■□□□□ 0.32
HSPG2-207ENST00000453796 GOLGA8HP0CJ92 632 aa17.07■□□□□ 0.32
HSPG2-207ENST00000453796 CCDC136Q96JN2 1154 aa17.07■□□□□ 0.32
HSPG2-207ENST00000453796 UBAC1Q9BSL1 405 aa17.07■□□□□ 0.32
HSPG2-207ENST00000453796 CYP39A1Q9NYL5 469 aa17.07■□□□□ 0.32
HSPG2-207ENST00000453796 WDR19Q8NEZ3 1342 aa17.06■□□□□ 0.32
HSPG2-207ENST00000453796 SOWAHBA6NEL2 793 aa17.06■□□□□ 0.32
HSPG2-207ENST00000453796 DNM1LO00429 736 aa17.06■□□□□ 0.32
HSPG2-207ENST00000453796 EVI5O60447 810 aa17.06■□□□□ 0.32
HSPG2-207ENST00000453796 TRDNQ13061 729 aa17.06■□□□□ 0.32
HSPG2-207ENST00000453796 ASPRV1Q53RT3 343 aa17.06■□□□□ 0.32
HSPG2-207ENST00000453796 IFIT1BQ5T764 474 aaKnown RBP17.06■□□□□ 0.32
HSPG2-207ENST00000453796 UBA5Q9GZZ9 404 aa17.06■□□□□ 0.32
HSPG2-207ENST00000453796 KATNBL1Q9H079 304 aa17.06■□□□□ 0.32
HSPG2-207ENST00000453796 CPVLQ9H3G5 476 aa17.06■□□□□ 0.32
HSPG2-207ENST00000453796 POTEB2H3BUK9 544 aa17.05■□□□□ 0.32
HSPG2-207ENST00000453796 ANTXR2P58335 489 aa17.05■□□□□ 0.32
HSPG2-207ENST00000453796 MB21D2Q8IYB1 491 aaPredicted RBP17.05■□□□□ 0.32
HSPG2-207ENST00000453796 NCOA7Q8NI08 942 aa17.05■□□□□ 0.32
HSPG2-207ENST00000453796 CLEC4DQ8WXI8 215 aa17.05■□□□□ 0.32
HSPG2-207ENST00000453796 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.05■□□□□ 0.32
HSPG2-207ENST00000453796 CNPY2Q9Y2B0 182 aa17.05■□□□□ 0.32
HSPG2-207ENST00000453796 NR2E3Q9Y5X4 410 aa17.05■□□□□ 0.32
HSPG2-207ENST00000453796 NFIBO00712 420 aa17.04■□□□□ 0.32
HSPG2-207ENST00000453796 AKR1A1P14550 325 aa17.04■□□□□ 0.32
HSPG2-207ENST00000453796 ACVR2BQ13705 512 aa17.04■□□□□ 0.32
HSPG2-207ENST00000453796 NECTIN1Q15223 517 aa17.04■□□□□ 0.32
HSPG2-207ENST00000453796 LRRC41Q15345 812 aa17.04■□□□□ 0.32
HSPG2-207ENST00000453796 LRRC26Q2I0M4 334 aa17.04■□□□□ 0.32
HSPG2-207ENST00000453796 GJC2Q5T442 439 aaPredicted RBP17.04■□□□□ 0.32
HSPG2-207ENST00000453796 KIAA1211Q6ZU35 1233 aa17.04■□□□□ 0.32
HSPG2-207ENST00000453796 ARMCX2Q7L311 632 aa17.04■□□□□ 0.32
HSPG2-207ENST00000453796 CCDC144CPQ8IYA2 1237 aa17.04■□□□□ 0.32
HSPG2-207ENST00000453796 ADGRF4Q8IZF3 695 aa17.04■□□□□ 0.32
HSPG2-207ENST00000453796 ARRDC4Q8NCT1 418 aa17.04■□□□□ 0.32
HSPG2-207ENST00000453796 ABHD16BQ9H3Z7 469 aa17.04■□□□□ 0.32
HSPG2-207ENST00000453796 SENP2Q9HC62 589 aa17.04■□□□□ 0.32
HSPG2-207ENST00000453796 PNMA2Q9UL42 364 aa17.04■□□□□ 0.32
HSPG2-207ENST00000453796 BAZ2BQ9UIF8 2168 aaKnown RBP17.04■□□□□ 0.32
HSPG2-207ENST00000453796 ADCY6O43306 1168 aa17.03■□□□□ 0.32
HSPG2-207ENST00000453796 PARP1P09874 1014 aaKnown RBP17.03■□□□□ 0.32
HSPG2-207ENST00000453796 RARBP10826 455 aa17.03■□□□□ 0.32
HSPG2-207ENST00000453796 NSMFQ6X4W1 530 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms