RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 ZNF467Q7Z7K2 595 aaPredicted RBP14.73□□□□□ -0.05
CPSF4-208ENST00000452047 DCAF4Q8WV16 495 aa14.73□□□□□ -0.05
CPSF4-208ENST00000452047 AGBL1Q96MI9 1066 aa14.73□□□□□ -0.05
CPSF4-208ENST00000452047 TMEM47Q9BQJ4 181 aa14.73□□□□□ -0.05
CPSF4-208ENST00000452047 DIAPH3Q9NSV4 1193 aa14.73□□□□□ -0.05
CPSF4-208ENST00000452047 PRR12Q9ULL5 1215 aa14.73□□□□□ -0.05
CPSF4-208ENST00000452047 KBTBD13C9JR72 458 aa14.72□□□□□ -0.05
CPSF4-208ENST00000452047 HIP1O00291 1037 aa14.72□□□□□ -0.05
CPSF4-208ENST00000452047 SNAI1O95863 264 aaPredicted RBP14.72□□□□□ -0.05
CPSF4-208ENST00000452047 TOP1P11387 765 aaKnown RBP14.72□□□□□ -0.05
CPSF4-208ENST00000452047 GSPT1P15170 499 aaKnown RBP14.72□□□□□ -0.05
CPSF4-208ENST00000452047 MAGEA10P43363 369 aaPredicted RBP14.72□□□□□ -0.05
CPSF4-208ENST00000452047 IRX6P78412 446 aaPredicted RBP14.72□□□□□ -0.05
CPSF4-208ENST00000452047 MFSD6Q6ZSS7 791 aa14.72□□□□□ -0.05
CPSF4-208ENST00000452047 ANKRD35Q8N283 1001 aa14.72□□□□□ -0.05
CPSF4-208ENST00000452047 IL25Q9H293 177 aa14.72□□□□□ -0.05
CPSF4-208ENST00000452047 ACAD9Q9H845 621 aa14.72□□□□□ -0.05
CPSF4-208ENST00000452047 XPNPEP3Q9NQH7 507 aa14.72□□□□□ -0.05
CPSF4-208ENST00000452047 HOMER2Q9NSB8 354 aa14.72□□□□□ -0.05
CPSF4-208ENST00000452047 CNPY2Q9Y2B0 182 aa14.72□□□□□ -0.05
CPSF4-208ENST00000452047 RARBP10826 455 aa14.71□□□□□ -0.05
CPSF4-208ENST00000452047 AKR1A1P14550 325 aa14.71□□□□□ -0.05
CPSF4-208ENST00000452047 ATN1P54259 1190 aaPredicted RBP14.71□□□□□ -0.05
CPSF4-208ENST00000452047 SNX17Q15036 470 aa14.71□□□□□ -0.05
CPSF4-208ENST00000452047 CCDC96Q2M329 555 aa14.71□□□□□ -0.05
CPSF4-208ENST00000452047 BTNL9Q6UXG8 535 aa14.71□□□□□ -0.05
CPSF4-208ENST00000452047 LENG1Q96BZ8 264 aaPredicted RBP14.71□□□□□ -0.05
CPSF4-208ENST00000452047 DSCC1Q9BVC3 393 aa14.71□□□□□ -0.05
CPSF4-208ENST00000452047 RNF41Q9H4P4 317 aaPredicted RBP14.71□□□□□ -0.05
CPSF4-208ENST00000452047 A1CFQ9NQ94 594 aaKnown RBP14.71□□□□□ -0.05
CPSF4-208ENST00000452047 RNF146Q9NTX7 359 aa14.71□□□□□ -0.05
CPSF4-208ENST00000452047 MTMR7Q9Y216 660 aa14.71□□□□□ -0.05
CPSF4-208ENST00000452047 COL6A3P12111 3177 aa14.71□□□□□ -0.06
CPSF4-208ENST00000452047 ZNF213O14771 459 aa14.7□□□□□ -0.06
CPSF4-208ENST00000452047 ADAMTS4O75173 837 aa14.7□□□□□ -0.06
CPSF4-208ENST00000452047 PGK1P00558 417 aa14.7□□□□□ -0.06
CPSF4-208ENST00000452047 SNHG28P0DPA3 235 aa14.7□□□□□ -0.06
CPSF4-208ENST00000452047 PDHBP11177 359 aa14.7□□□□□ -0.06
CPSF4-208ENST00000452047 RTP1P59025 263 aa14.7□□□□□ -0.06
CPSF4-208ENST00000452047 SNAP25P60880 206 aa14.7□□□□□ -0.06
CPSF4-208ENST00000452047 TKFCQ3LXA3 575 aa14.7□□□□□ -0.06
CPSF4-208ENST00000452047 TTC22Q5TAA0 569 aa14.7□□□□□ -0.06
CPSF4-208ENST00000452047 TTBK2Q6IQ55 1244 aa14.7□□□□□ -0.06
CPSF4-208ENST00000452047 CCDC174Q6PII3 467 aa14.7□□□□□ -0.06
CPSF4-208ENST00000452047 FAM133AQ8N9E0 248 aa14.7□□□□□ -0.06
CPSF4-208ENST00000452047 TTC14Q96N46 770 aa14.7□□□□□ -0.06
CPSF4-208ENST00000452047 TRERF1Q96PN7 1200 aa14.7□□□□□ -0.06
CPSF4-208ENST00000452047 RANBP17Q9H2T7 1088 aaKnown RBP14.7□□□□□ -0.06
CPSF4-208ENST00000452047 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.7□□□□□ -0.06
CPSF4-208ENST00000452047 PHF24Q9UPV7 400 aa14.7□□□□□ -0.06
CPSF4-208ENST00000452047 ASTN1O14525 1302 aa14.69□□□□□ -0.06
CPSF4-208ENST00000452047 ADCY6O43306 1168 aa14.69□□□□□ -0.06
CPSF4-208ENST00000452047 MYCNP04198 464 aaPredicted RBP14.69□□□□□ -0.06
CPSF4-208ENST00000452047 ICAM1P05362 532 aa14.69□□□□□ -0.06
CPSF4-208ENST00000452047 ALAS1P13196 640 aa14.69□□□□□ -0.06
CPSF4-208ENST00000452047 SLC16A2P36021 539 aa14.69□□□□□ -0.06
CPSF4-208ENST00000452047 ADCYAP1R1P41586 468 aa14.69□□□□□ -0.06
CPSF4-208ENST00000452047 NT5C2P49902 561 aa14.69□□□□□ -0.06
CPSF4-208ENST00000452047 CNTN2Q02246 1040 aa14.69□□□□□ -0.06
CPSF4-208ENST00000452047 MUM1L1Q5H9M0 696 aa14.69□□□□□ -0.06
CPSF4-208ENST00000452047 SLC39A5Q6ZMH5 540 aa14.69□□□□□ -0.06
CPSF4-208ENST00000452047 ARMCX2Q7L311 632 aa14.69□□□□□ -0.06
CPSF4-208ENST00000452047 ESR2Q92731 530 aa14.69□□□□□ -0.06
CPSF4-208ENST00000452047 KATNBL1Q9H079 304 aa14.69□□□□□ -0.06
CPSF4-208ENST00000452047 FRMPD2Q68DX3 1309 aaPredicted RBP14.68□□□□□ -0.06
CPSF4-208ENST00000452047 SYNRGQ9UMZ2 1314 aa14.68□□□□□ -0.06
CPSF4-208ENST00000452047 SOWAHBA6NEL2 793 aa14.68□□□□□ -0.06
CPSF4-208ENST00000452047 POTEB2H3BUK9 544 aa14.68□□□□□ -0.06
CPSF4-208ENST00000452047 SOX1O00570 391 aaPredicted RBP14.68□□□□□ -0.06
CPSF4-208ENST00000452047 ZNF543Q08ER8 600 aa14.68□□□□□ -0.06
CPSF4-208ENST00000452047 ACVR2BQ13705 512 aa14.68□□□□□ -0.06
CPSF4-208ENST00000452047 SYDE2Q5VT97 1194 aa14.68□□□□□ -0.06
CPSF4-208ENST00000452047 C1orf53Q5VUE5 145 aa14.68□□□□□ -0.06
CPSF4-208ENST00000452047 RNF180Q86T96 592 aa14.68□□□□□ -0.06
CPSF4-208ENST00000452047 CCDC144CPQ8IYA2 1237 aa14.68□□□□□ -0.06
CPSF4-208ENST00000452047 FERMT2Q96AC1 680 aa14.68□□□□□ -0.06
CPSF4-208ENST00000452047 ZKSCAN3Q9BRR0 538 aa14.68□□□□□ -0.06
CPSF4-208ENST00000452047 ABHD16BQ9H3Z7 469 aa14.68□□□□□ -0.06
CPSF4-208ENST00000452047 ZHX1Q9UKY1 873 aaPredicted RBP14.68□□□□□ -0.06
CPSF4-208ENST00000452047 FAM184BQ9ULE4 1060 aa14.68□□□□□ -0.06
CPSF4-208ENST00000452047 CCPG1Q9ULG6 757 aa14.68□□□□□ -0.06
CPSF4-208ENST00000452047 KDM4AO75164 1064 aa14.67□□□□□ -0.06
CPSF4-208ENST00000452047 DUSP11O75319 330 aaKnown RBP14.67□□□□□ -0.06
CPSF4-208ENST00000452047 IMMTQ16891 758 aaKnown RBP14.67□□□□□ -0.06
CPSF4-208ENST00000452047 TRIM60Q495X7 471 aa14.67□□□□□ -0.06
CPSF4-208ENST00000452047 DGKHQ86XP1 1220 aa14.67□□□□□ -0.06
CPSF4-208ENST00000452047 GPCPD1Q9NPB8 672 aa14.67□□□□□ -0.06
CPSF4-208ENST00000452047 CYP39A1Q9NYL5 469 aa14.67□□□□□ -0.06
CPSF4-208ENST00000452047 ATP11BQ9Y2G3 1177 aa14.67□□□□□ -0.06
CPSF4-208ENST00000452047 RAD50Q92878 1312 aa14.66□□□□□ -0.06
CPSF4-208ENST00000452047 A0A1W2PQ45 241 aaPredicted RBP14.66□□□□□ -0.06
CPSF4-208ENST00000452047 A0A1W2PQY0 241 aa14.66□□□□□ -0.06
CPSF4-208ENST00000452047 B4E1Z4 1266 aa14.66□□□□□ -0.06
CPSF4-208ENST00000452047 MDM2Q00987 491 aaPredicted RBP14.66□□□□□ -0.06
CPSF4-208ENST00000452047 CCDC144BQ3MJ40 725 aa14.66□□□□□ -0.06
CPSF4-208ENST00000452047 CCSAPQ6IQ19 270 aaPredicted RBP14.66□□□□□ -0.06
CPSF4-208ENST00000452047 IQCA1Q86XH1 822 aa14.66□□□□□ -0.06
CPSF4-208ENST00000452047 TDHQ8IZJ6 230 aa14.66□□□□□ -0.06
CPSF4-208ENST00000452047 KLHDC9Q8NEP7 349 aa14.66□□□□□ -0.06
CPSF4-208ENST00000452047 ANKS1AQ92625 1134 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms